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6 years agoDon't build smpi in a separate library anymore.
Arnaud Giersch [Thu, 28 Mar 2013 20:47:04 +0000 (21:47 +0100)]
Don't build smpi in a separate library anymore.

6 years agoAdd collectives for allgather, allreduce, bcast and reduce
Paul Bédaride [Thu, 28 Mar 2013 16:15:32 +0000 (17:15 +0100)]
Add collectives for allgather, allreduce, bcast and reduce

6 years agomodel-checker : add example (electric_fence) to check the soundness of the verificati...
Marion Guthmuller [Wed, 27 Mar 2013 12:17:43 +0000 (13:17 +0100)]
model-checker : add example (electric_fence) to check the soundness of the verification with DPOR and delete another one (random_test)

6 years agofix for windows -- not sure if it's still mandatory, but I guess so
Martin Quinson [Wed, 27 Mar 2013 00:27:37 +0000 (01:27 +0100)]
fix for windows -- not sure if it's still mandatory, but I guess so

6 years agoFix various build errors.
Arnaud Giersch [Mon, 25 Mar 2013 21:27:09 +0000 (22:27 +0100)]
Fix various build errors.

Mainly unused variables, or pointer arithmetic with pointers to void.

The builds with compile optimizations are still broken, because of smpi symbols
imported in libsimgrid, but I'm not sure how to fix this properly.

6 years agoReindent files before changes.
Arnaud Giersch [Mon, 25 Mar 2013 21:21:15 +0000 (22:21 +0100)]
Reindent files before changes.

6 years agoMissing include.
Arnaud Giersch [Mon, 25 Mar 2013 21:20:34 +0000 (22:20 +0100)]
Missing include.

6 years agomodel-checker : variable declaration deleted with a previous conflict
Marion Guthmuller [Mon, 25 Mar 2013 22:47:08 +0000 (23:47 +0100)]
model-checker : variable declaration deleted with a previous conflict

6 years agomodel-checker : add variable deleted before to resolve a merge conflict
Marion Guthmuller [Mon, 25 Mar 2013 22:29:42 +0000 (23:29 +0100)]
model-checker : add variable deleted before to resolve a merge conflict

6 years agomodel-checker : ignore variable about time used with tracing
Marion Guthmuller [Mon, 25 Mar 2013 21:37:39 +0000 (22:37 +0100)]
model-checker : ignore variable about time used with tracing

6 years agomodel-checker : if acceptance cycle is detected, get num of equal pairs
Marion Guthmuller [Mon, 25 Mar 2013 21:36:36 +0000 (22:36 +0100)]
model-checker : if acceptance cycle is detected, get num of equal pairs

6 years agomodel-checker : last fix in DPOR algorithm if max depth is reached
Marion Guthmuller [Mon, 25 Mar 2013 21:02:50 +0000 (22:02 +0100)]
model-checker : last fix in DPOR algorithm if max depth is reached

If max_depth is reached, the last state in stack may have a process
interleaved with a request not executed yet. In that case, we start to
apply the independence theorem with this last request not executed
yet. Otherwise (no more process to interleave in the last state of the
stack), last state is deleted before starting to apply independence theorem.

6 years agomodel-checker : update bugged1 tesh
Marion Guthmuller [Thu, 21 Mar 2013 14:38:13 +0000 (15:38 +0100)]
model-checker : update bugged1 tesh

6 years agodocumentation cosmetics
Martin Quinson [Mon, 25 Mar 2013 21:02:34 +0000 (22:02 +0100)]
documentation cosmetics

6 years agofix some simple errors in the commit of Paul (not enough to compile here)
Martin Quinson [Mon, 25 Mar 2013 20:36:35 +0000 (21:36 +0100)]
fix some simple errors in the commit of Paul (not enough to compile here)

6 years agorework the SMPI documentation quite a bit
Martin Quinson [Mon, 25 Mar 2013 20:31:56 +0000 (21:31 +0100)]
rework the SMPI documentation quite a bit

6 years agosplit SMPI documentation into a specific file (no real change)
Martin Quinson [Mon, 25 Mar 2013 19:52:35 +0000 (20:52 +0100)]
split SMPI documentation into a specific file (no real change)

6 years agoMerge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/simgrid/simgrid
Jonathan Rouzaud-Cornabas [Mon, 25 Mar 2013 16:35:26 +0000 (17:35 +0100)]
Merge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/simgrid/simgrid

6 years agoFix sendBounded java binding
Jonathan Rouzaud-Cornabas [Mon, 25 Mar 2013 16:35:14 +0000 (17:35 +0100)]
Fix sendBounded java binding

6 years agoAdd colls.h to DefinePackages
Paul Bédaride [Mon, 25 Mar 2013 16:24:48 +0000 (17:24 +0100)]
Add colls.h to DefinePackages

6 years agoMerge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/simgrid/simgrid
Paul Bédaride [Mon, 25 Mar 2013 16:07:50 +0000 (17:07 +0100)]
Merge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/simgrid/simgrid

6 years agoAdd alltoall collectives from starmpi
Paul Bédaride [Mon, 25 Mar 2013 13:50:46 +0000 (14:50 +0100)]
Add alltoall collectives from starmpi

6 years agoDumb commit: kill empty line.
Arnaud Giersch [Thu, 21 Mar 2013 14:08:23 +0000 (15:08 +0100)]
Dumb commit: kill empty line.

6 years agoKill unused variable.
Arnaud Giersch [Thu, 21 Mar 2013 14:04:33 +0000 (15:04 +0100)]
Kill unused variable.

6 years agomodel-checker : use xbt_free_f instead of a new function which do the same thing
Marion Guthmuller [Thu, 21 Mar 2013 13:04:50 +0000 (14:04 +0100)]
model-checker : use xbt_free_f instead of a new function which do the same thing

6 years agomodel-checker : fix soundness of DPOR algorithm if max depth is reached
Marion Guthmuller [Thu, 21 Mar 2013 12:41:21 +0000 (13:41 +0100)]
model-checker : fix soundness of DPOR algorithm if max depth is reached

6 years agoAlso link with platform independent libunwind.
Arnaud Giersch [Tue, 19 Mar 2013 19:48:50 +0000 (20:48 +0100)]
Also link with platform independent libunwind.

6 years agoInitialize variables.
Arnaud Giersch [Tue, 19 Mar 2013 19:44:11 +0000 (20:44 +0100)]
Initialize variables.

6 years agoGenerated file has changed.
Arnaud Giersch [Tue, 19 Mar 2013 17:59:16 +0000 (18:59 +0100)]
Generated file has changed.

6 years agoAdd missing declarations.
Arnaud Giersch [Tue, 19 Mar 2013 17:57:10 +0000 (18:57 +0100)]
Add missing declarations.

6 years agomodel-checker : update tesh
Marion Guthmuller [Tue, 19 Mar 2013 18:37:03 +0000 (19:37 +0100)]
model-checker : update tesh

6 years agomodel-checker : order reached_pairs by number of processes and heap bytes used
Marion Guthmuller [Tue, 19 Mar 2013 18:27:51 +0000 (19:27 +0100)]
model-checker : order reached_pairs by number of processes and heap bytes used

6 years agomodel-checker : free memory
Marion Guthmuller [Tue, 19 Mar 2013 15:41:03 +0000 (16:41 +0100)]
model-checker : free memory

6 years agomodel-checker : cosmetics
Marion Guthmuller [Tue, 19 Mar 2013 15:39:25 +0000 (16:39 +0100)]
model-checker : cosmetics

6 years agomodel-checker : fragment size and fragment number may be negative
Marion Guthmuller [Tue, 19 Mar 2013 15:39:04 +0000 (16:39 +0100)]
model-checker : fragment size and fragment number may be negative

6 years agoAdd receive bounded to the java binding
Jonathan Rouzaud-Cornabas [Tue, 19 Mar 2013 17:33:28 +0000 (18:33 +0100)]
Add receive bounded to the java binding

6 years agomodel-checker : store heap_bytes_used and number of processes directly in mc_visited_...
Marion Guthmuller [Tue, 19 Mar 2013 15:24:01 +0000 (16:24 +0100)]
model-checker : store heap_bytes_used and number of processes directly in mc_visited_state and mc_visited_pair

6 years agomodel-checker : update tesh (according to previous cleanups)
Marion Guthmuller [Tue, 19 Mar 2013 12:50:30 +0000 (13:50 +0100)]
model-checker : update tesh (according to previous cleanups)

6 years agomodel-checker : cleanups
Marion Guthmuller [Tue, 19 Mar 2013 12:41:22 +0000 (13:41 +0100)]
model-checker : cleanups

- remove (a part of) redundant code
- rename structs and variables
- update headers

6 years agomodel-checker : code refactoring for get_hash_global
Marion Guthmuller [Mon, 18 Mar 2013 10:10:03 +0000 (11:10 +0100)]
model-checker : code refactoring for get_hash_global

6 years agoFix msg-bittorrent's problem of incompletion
Nicolas Bonichon [Mon, 18 Mar 2013 14:53:43 +0000 (15:53 +0100)]
Fix msg-bittorrent's problem of incompletion

In the previous version, a peer wasn't able to handle more than
more message per second but could receive much more. As a consequence,
the application gets stuck because of queuing issue.

The problem comes from teh main loops (leech_loop() and seed_loop()))
each call of MSG_task_irecv() was followed by a call of
MSG_process_sleep(1) because the MSG_comm_test() always fails the
first time.

A call of MSG_mailbox_set_async() at the begining fixes this problem.

: in the main loops (leech_loop)

6 years agomodel-checker : update msg chord example for the verification with MC
Marion Guthmuller [Sat, 16 Mar 2013 22:07:10 +0000 (23:07 +0100)]
model-checker : update msg chord example for the verification with MC

6 years agomodel-checker : fix tesh (different local deployment file)
Marion Guthmuller [Sat, 16 Mar 2013 21:47:16 +0000 (22:47 +0100)]
model-checker : fix tesh (different local deployment file)

6 years agomodel-checker : fix dpor
Marion Guthmuller [Sat, 16 Mar 2013 21:32:06 +0000 (22:32 +0100)]
model-checker : fix dpor

6 years agomodel-checker : fix compilation error without MC
Marion Guthmuller [Sat, 16 Mar 2013 21:13:44 +0000 (22:13 +0100)]
model-checker : fix compilation error without MC

6 years agoupdate tesh
Marion Guthmuller [Sat, 16 Mar 2013 18:00:15 +0000 (19:00 +0100)]
update tesh

6 years agomodel-checker : update tesh
Marion Guthmuller [Sat, 16 Mar 2013 17:47:39 +0000 (18:47 +0100)]
model-checker : update tesh

6 years agomodel-checker : code refactoring for heap comparison algorithm
Marion Guthmuller [Sat, 16 Mar 2013 17:28:45 +0000 (18:28 +0100)]
model-checker : code refactoring for heap comparison algorithm

6 years agomodel-checker : add state equality reduction in ddfs algorithm
Marion Guthmuller [Sat, 16 Mar 2013 17:25:32 +0000 (18:25 +0100)]
model-checker : add state equality reduction in ddfs algorithm

6 years agomodel-checker : get current backtrace with libunwind (only available with ucontext...
Marion Guthmuller [Sat, 16 Mar 2013 17:23:31 +0000 (18:23 +0100)]
model-checker : get current backtrace with libunwind (only available with ucontext factory for now ...)

6 years agomodel-checker : code refactoring
Marion Guthmuller [Thu, 14 Mar 2013 13:48:54 +0000 (14:48 +0100)]
model-checker : code refactoring

6 years agomodel-checker : ignore mc_time for heap comparison and global variables comparison
Marion Guthmuller [Wed, 13 Mar 2013 16:07:17 +0000 (17:07 +0100)]
model-checker : ignore mc_time for heap comparison and global variables comparison

6 years agomodel-checker : improve debug message
Marion Guthmuller [Wed, 13 Mar 2013 16:05:56 +0000 (17:05 +0100)]
model-checker : improve debug message

6 years agomodel-checker : new model-checker configuration model-check/dot_output=file_name...
Marion Guthmuller [Wed, 13 Mar 2013 16:04:20 +0000 (17:04 +0100)]
model-checker : new model-checker configuration model-check/dot_output=file_name which generates a dot output of graph state explored during model checking

6 years agomodel-checker : return state number if the current state is equal to another state...
Marion Guthmuller [Wed, 13 Mar 2013 15:59:46 +0000 (16:59 +0100)]
model-checker : return state number if the current state is equal to another state already visited

6 years agomodel-checker : fix MC_RANDOM simcall
Marion Guthmuller [Wed, 13 Mar 2013 15:41:47 +0000 (16:41 +0100)]
model-checker : fix MC_RANDOM simcall

Time doesn't exist in model-checking. However, there are some
protocols, such as Chord, with some periodics operations (random
lookup, check predecessors, ...).  If the model-checker is used with
these examples, these operations are never executed because of the
time which doesn't progress.  With MC_RANDOM simcall, the
model-checker will explore the two cases : the case in which the
periodic operation is executed and the other case in which it is not
executed.  In this way, the verification is exhaustive whatever the
period.

6 years agomodel-checker : remove obsolete example
Marion Guthmuller [Wed, 13 Mar 2013 15:31:54 +0000 (16:31 +0100)]
model-checker : remove obsolete example

6 years agomodel-checker : set ignore flag to 0 if reallocation
Marion Guthmuller [Tue, 5 Mar 2013 20:38:32 +0000 (21:38 +0100)]
model-checker : set ignore flag to 0 if reallocation

6 years agomodel-checker : minor changes for debug information in heap comparison algorithm
Marion Guthmuller [Tue, 5 Mar 2013 20:36:44 +0000 (21:36 +0100)]
model-checker : minor changes for debug information in heap comparison algorithm

6 years agomodel-checker : check if fragment or block has been already compared
Marion Guthmuller [Tue, 5 Mar 2013 20:34:35 +0000 (21:34 +0100)]
model-checker : check if fragment or block has been already compared

6 years agomodel-checker : remove local variable only if frame name is known
Marion Guthmuller [Tue, 5 Mar 2013 20:31:51 +0000 (21:31 +0100)]
model-checker : remove local variable only if frame name is known

6 years agomodel-checker : remove static function
Marion Guthmuller [Tue, 5 Mar 2013 20:28:57 +0000 (21:28 +0100)]
model-checker : remove static function

6 years agomodel-checker : cosmetics
Marion Guthmuller [Tue, 5 Mar 2013 20:25:11 +0000 (21:25 +0100)]
model-checker : cosmetics

6 years agomodel-checker : get hash of local and global variables which are not pointers
Marion Guthmuller [Tue, 5 Mar 2013 20:24:45 +0000 (21:24 +0100)]
model-checker : get hash of local and global variables which are not pointers

6 years agomodel-checker : ignore running context of processes for system state comparison
Marion Guthmuller [Tue, 5 Mar 2013 17:05:54 +0000 (18:05 +0100)]
model-checker : ignore running context of processes for system state comparison

6 years agomodel-checker : use short instead of int for ignore information in mmalloc meta-data
Marion Guthmuller [Mon, 11 Feb 2013 08:20:35 +0000 (09:20 +0100)]
model-checker : use short instead of int for ignore information in mmalloc meta-data

6 years agomodel-checker : init ignore information for each block/fragment only in mmalloc
Marion Guthmuller [Mon, 11 Feb 2013 08:19:22 +0000 (09:19 +0100)]
model-checker : init ignore information for each block/fragment only in mmalloc

6 years agomodel-checker : remove commentated declaration of function (doesn't exist anymore)
Marion Guthmuller [Mon, 11 Feb 2013 08:14:31 +0000 (09:14 +0100)]
model-checker : remove commentated declaration of function (doesn't exist anymore)

6 years agomodel-checker : remove variable from mc_local_variables if ignored
Marion Guthmuller [Mon, 11 Feb 2013 08:12:00 +0000 (09:12 +0100)]
model-checker : remove variable from mc_local_variables if ignored

6 years agomodel-checker : fix memory leak
Marion Guthmuller [Mon, 11 Feb 2013 08:08:42 +0000 (09:08 +0100)]
model-checker : fix memory leak

6 years agomodel-checker : cosmetics
Marion Guthmuller [Mon, 11 Feb 2013 08:08:26 +0000 (09:08 +0100)]
model-checker : cosmetics

6 years agomodel-checker : cleanups in mc_snapshot structure
Marion Guthmuller [Mon, 11 Feb 2013 08:06:06 +0000 (09:06 +0100)]
model-checker : cleanups in mc_snapshot structure

6 years agomodel-checker : new simcall MC_RANDOM
Marion Guthmuller [Mon, 11 Feb 2013 08:01:36 +0000 (09:01 +0100)]
model-checker : new simcall MC_RANDOM

6 years agomodel-checker : fix memory leak
Marion Guthmuller [Sun, 10 Feb 2013 12:48:46 +0000 (13:48 +0100)]
model-checker : fix memory leak

6 years agomodel-checker : get instruction pointer and frame name with libunwind for the compari...
Marion Guthmuller [Fri, 8 Feb 2013 13:37:03 +0000 (14:37 +0100)]
model-checker : get instruction pointer and frame name with libunwind for the comparison of stacks

6 years agoAvoid to run the smpirun script through valgrind on memcheck.
Arnaud Giersch [Fri, 22 Feb 2013 15:29:01 +0000 (16:29 +0100)]
Avoid to run the smpirun script through valgrind on memcheck.

6 years agoAdd new option to smpirun, for running valgrind/gdb/whatever...
Arnaud Giersch [Fri, 22 Feb 2013 15:28:11 +0000 (16:28 +0100)]
Add new option to smpirun, for running valgrind/gdb/whatever...

6 years agoImprove the printing of default values when size != 1.
Arnaud Giersch [Fri, 8 Mar 2013 16:35:14 +0000 (17:35 +0100)]
Improve the printing of default values when size != 1.

6 years agoCosmetics: add space before opening parenthesis.
Arnaud Giersch [Fri, 8 Mar 2013 16:13:57 +0000 (17:13 +0100)]
Cosmetics: add space before opening parenthesis.

6 years agoCheck return code, and report errors.
Arnaud Giersch [Wed, 6 Mar 2013 12:18:39 +0000 (13:18 +0100)]
Check return code, and report errors.

Avoids to call MPI_Get_count with an invalid status.

6 years agoUse simple arrays, instead of dynars.
Arnaud Giersch [Wed, 6 Mar 2013 10:59:29 +0000 (11:59 +0100)]
Use simple arrays, instead of dynars.

Also fix the use of uninitialized values in PMPI_Waitall.

6 years agoReally copy only when recvbuf != sendbuf.
Arnaud Giersch [Wed, 6 Mar 2013 10:02:20 +0000 (11:02 +0100)]
Really copy only when recvbuf != sendbuf.

And avoid to call memcpy with overlapping regions.

6 years ago[doc] general update on tracing doc
Lucas Schnorr [Fri, 1 Mar 2013 19:49:25 +0000 (16:49 -0300)]
[doc] general update on tracing doc

6 years agoDefine missing function.
Arnaud Giersch [Thu, 21 Feb 2013 17:28:27 +0000 (18:28 +0100)]
Define missing function.

6 years agoRemove useless statements.
Arnaud Giersch [Thu, 21 Feb 2013 17:01:45 +0000 (18:01 +0100)]
Remove useless statements.

6 years agoTry to fix const madness.
Arnaud Giersch [Thu, 21 Feb 2013 17:01:23 +0000 (18:01 +0100)]
Try to fix const madness.

See http://c-faq.com/ansi/constmismatch.html for a related FAQ.

6 years agoFix memory leaks in smpi.
Arnaud Giersch [Thu, 21 Feb 2013 13:41:40 +0000 (14:41 +0100)]
Fix memory leaks in smpi.

6 years agoExtend smpi_register_static to accept any free function.
Arnaud Giersch [Thu, 21 Feb 2013 13:41:07 +0000 (14:41 +0100)]
Extend smpi_register_static to accept any free function.

6 years agoFix a few more memory leaks.
Arnaud Giersch [Wed, 20 Feb 2013 22:09:03 +0000 (23:09 +0100)]
Fix a few more memory leaks.

6 years agoAvoid to export internal variables.
Arnaud Giersch [Wed, 20 Feb 2013 20:26:05 +0000 (21:26 +0100)]
Avoid to export internal variables.

6 years agoFree timer after it's been used.
Arnaud Giersch [Wed, 20 Feb 2013 17:41:04 +0000 (18:41 +0100)]
Free timer after it's been used.

6 years agoUse splitted xml files, and avoid memory leaks in the parser.
Arnaud Giersch [Wed, 20 Feb 2013 17:27:18 +0000 (18:27 +0100)]
Use splitted xml files, and avoid memory leaks in the parser.

6 years agoSplit the xml file, and destroy task, to fix memory leaks.
Arnaud Giersch [Wed, 20 Feb 2013 16:49:48 +0000 (17:49 +0100)]
Split the xml file, and destroy task, to fix memory leaks.

6 years agoFix a few memory leaks.
Arnaud Giersch [Wed, 20 Feb 2013 12:51:46 +0000 (13:51 +0100)]
Fix a few memory leaks.

6 years agoremove forgotten debug println
Augustin Degomme [Tue, 19 Feb 2013 16:35:22 +0000 (17:35 +0100)]
remove forgotten debug println

6 years agoJava didn't report the same OS name as Cmake for Windows platform, force it to be...
Augustin Degomme [Tue, 19 Feb 2013 16:24:33 +0000 (17:24 +0100)]
Java didn't report the same OS name as Cmake for Windows platform, force it to be "Windows"

6 years agochange an include, to avoid linking from simgrid to smpi
Augustin Degomme [Tue, 19 Feb 2013 15:55:03 +0000 (16:55 +0100)]
change an include, to avoid linking from simgrid to smpi

6 years agochange name of the real executed main function to a windows specific one
Augustin Degomme [Tue, 19 Feb 2013 15:54:26 +0000 (16:54 +0100)]
change name of the real executed main function to a windows specific one

6 years agoadd smpi to windows installer
Augustin Degomme [Tue, 19 Feb 2013 15:51:59 +0000 (16:51 +0100)]
add smpi to windows installer

6 years agoforce lib names to stop changing when activating smpi on windows
Augustin Degomme [Tue, 19 Feb 2013 15:51:29 +0000 (16:51 +0100)]
force lib names to stop changing when activating smpi on windows