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6 years agoseparate allreduce tests, with one large and the other small, to avoid to lose too...
Augustin Degomme [Mon, 24 Jun 2013 13:43:39 +0000 (15:43 +0200)]
separate allreduce tests, with one large and the other small, to avoid to lose too much time in testing, and triggering timeouts.

6 years agofix two nasty bugs in complex datatypes handling, caught with test suite.
Augustin Degomme [Mon, 24 Jun 2013 12:49:51 +0000 (14:49 +0200)]
fix two nasty bugs in complex datatypes handling, caught with test suite.

6 years agomem leak
Augustin Degomme [Mon, 24 Jun 2013 12:49:04 +0000 (14:49 +0200)]
mem leak

6 years agopass collective selectors through mpich-coll test suite
Augustin Degomme [Mon, 24 Jun 2013 12:48:56 +0000 (14:48 +0200)]
pass collective selectors through mpich-coll test suite

6 years agostar-mpi's pairwise alltoall is only valid for power of 2 cases, add openmpi's one...
Augustin Degomme [Thu, 20 Jun 2013 08:11:46 +0000 (10:11 +0200)]
star-mpi's pairwise alltoall is only valid for power of 2 cases, add openmpi's one instead

6 years agocorrect a few bcast algorithms and change the test to actually use them all
Augustin Degomme [Wed, 19 Jun 2013 15:08:45 +0000 (17:08 +0200)]
correct a few bcast algorithms and change the test to actually use them all

6 years agohave allreduce test work on much larger arrays to trigger segmentation in one algorithm
Augustin Degomme [Wed, 19 Jun 2013 12:31:15 +0000 (14:31 +0200)]
have allreduce test work on much larger arrays to trigger segmentation in one algorithm

6 years agoompi selector was using the wrong algo for alltoallv, add the right one and use it
Augustin Degomme [Wed, 19 Jun 2013 11:08:42 +0000 (13:08 +0200)]
ompi selector was using the wrong algo for alltoallv, add the right one and use it

6 years agoincrease tesh timeout for replay
Augustin Degomme [Wed, 19 Jun 2013 09:03:54 +0000 (11:03 +0200)]
increase tesh timeout for replay

6 years agoadd forgotten test for an mpich algorithm
Augustin Degomme [Wed, 19 Jun 2013 09:03:26 +0000 (11:03 +0200)]
add forgotten test for an mpich algorithm

6 years agoapply some coding standard in function naming (agier has to be in
suter [Tue, 18 Jun 2013 13:28:34 +0000 (15:28 +0200)]
apply some coding standard in function naming (agier has to be in
vacations ... ;))

6 years agodon't call things storage when it's mount
suter [Tue, 18 Jun 2013 13:18:26 +0000 (15:18 +0200)]
don't call things storage when it's mount

6 years agodon't call things storage when it's mount
suter [Tue, 18 Jun 2013 13:15:57 +0000 (15:15 +0200)]
don't call things storage when it's mount

6 years agoThis is a bug in the implementation in OpenMPI, with OpenMPI accidentally working.
Augustin Degomme [Tue, 18 Jun 2013 12:02:26 +0000 (14:02 +0200)]
This is a bug in the implementation in OpenMPI, with OpenMPI accidentally working.
That's because MPI_ANY_SOURCE is also -1 in OpenMPI.

6 years agotest for barrier algorithms was testing scatter ...
Augustin Degomme [Tue, 18 Jun 2013 11:57:16 +0000 (13:57 +0200)]
test for barrier algorithms was testing scatter ...

6 years agochange some defined values to less current ones
Augustin Degomme [Tue, 18 Jun 2013 11:38:04 +0000 (13:38 +0200)]
change some defined values to less current ones

6 years agoMPI_ERR_COMM was sometimes returned instead of MPI_ERR_RANK in SMPI
Augustin Degomme [Tue, 18 Jun 2013 11:16:55 +0000 (13:16 +0200)]
MPI_ERR_COMM was sometimes returned instead of MPI_ERR_RANK in SMPI

6 years agoreduce_scatter default implementation was a mess
Augustin Degomme [Mon, 17 Jun 2013 16:13:53 +0000 (18:13 +0200)]
reduce_scatter default implementation was a mess

6 years agoif we send 0 data, don't bother with subtypes
Augustin Degomme [Mon, 17 Jun 2013 16:13:26 +0000 (18:13 +0200)]
if we send 0 data, don't bother with subtypes

6 years agoadd option "smpi/use_shared_malloc", with true as default, to allow disabling the...
Augustin Degomme [Mon, 17 Jun 2013 16:12:28 +0000 (18:12 +0200)]
add option "smpi/use_shared_malloc", with true as default, to allow disabling the shared memory SMPI stuff dynamically
Useful for debug purposes, to see if the shared memory is the cause of a bug

6 years agoyet another simplification of the storage API: we don't manage
suter [Tue, 18 Jun 2013 11:17:12 +0000 (13:17 +0200)]
yet another simplification of the storage API: we don't manage
file contents, no need for a buffer as parameter ...

6 years agosize shouldn't be accessible from the user API.
suter [Tue, 18 Jun 2013 10:53:14 +0000 (12:53 +0200)]
size shouldn't be accessible from the user API.

6 years agoFix of pastry
Paul Bédaride [Mon, 17 Jun 2013 09:07:18 +0000 (11:07 +0200)]
Fix of pastry

6 years agoAdd pastry msg example (First attempt)
Paul Bédaride [Fri, 14 Jun 2013 16:19:46 +0000 (18:19 +0200)]
Add pastry msg example (First attempt)

6 years agoChange xbt_os_timer interface to handle cpu time, thread time and
Guillaume Serrière [Fri, 14 Jun 2013 13:02:19 +0000 (15:02 +0200)]
Change xbt_os_timer interface to handle cpu time, thread time and
wall time distinctly.
Windows section isn't test.

Signed-off-by: Guillaume Serrière <guillaume.serriere@esial.net>
6 years agoUse HEAD as default reference for git archive.
Arnaud Giersch [Fri, 14 Jun 2013 10:58:39 +0000 (12:58 +0200)]
Use HEAD as default reference for git archive.

The default branch may be undefined.

6 years agoAdd a small value to avoid rounding differences between x86 and x86_64.
Arnaud Giersch [Fri, 14 Jun 2013 09:25:47 +0000 (11:25 +0200)]
Add a small value to avoid rounding differences between x86 and x86_64.

6 years agoChange type double for size_t.
Arnaud Giersch [Fri, 14 Jun 2013 09:25:16 +0000 (11:25 +0200)]
Change type double for size_t.

6 years agoRemove unused variables.
Arnaud Giersch [Fri, 14 Jun 2013 07:42:45 +0000 (09:42 +0200)]
Remove unused variables.

6 years agoComment out useless operation.
Arnaud Giersch [Fri, 14 Jun 2013 07:31:02 +0000 (09:31 +0200)]
Comment out useless operation.

6 years agoAdd missing dependency.
Arnaud Giersch [Thu, 13 Jun 2013 14:11:17 +0000 (16:11 +0200)]
Add missing dependency.

6 years agowrong file name in cmake file
Augustin Degomme [Fri, 14 Jun 2013 07:06:23 +0000 (09:06 +0200)]
wrong file name in cmake file

6 years agoadd missing prototype
Augustin Degomme [Fri, 14 Jun 2013 07:02:11 +0000 (09:02 +0200)]
add missing prototype

6 years agoopenmpi recently changed its decision for alltoallv algo
Augustin Degomme [Fri, 14 Jun 2013 06:57:24 +0000 (08:57 +0200)]
openmpi recently changed its decision for alltoallv algo

6 years agoadd missing replay files to dist
Augustin Degomme [Wed, 12 Jun 2013 12:34:41 +0000 (14:34 +0200)]
add missing replay files to dist

6 years agoforgot one file
degomme [Thu, 13 Jun 2013 22:56:09 +0000 (00:56 +0200)]
forgot one file

6 years agowe now have an mpich selector, and a bunch of new algorithms (--cfg=smpi/coll_selecto...
degomme [Thu, 13 Jun 2013 22:51:18 +0000 (00:51 +0200)]
we now have an mpich selector, and a bunch of new algorithms (--cfg=smpi/coll_selector:mpich)

6 years agoMerge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/simgrid/simgrid
Jonathan Rouzaud-Cornabas [Thu, 13 Jun 2013 13:52:57 +0000 (15:52 +0200)]
Merge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/simgrid/simgrid

6 years agoSIMIX call + MSG function + Java binding for get_core
Jonathan Rouzaud-Cornabas [Thu, 13 Jun 2013 13:52:48 +0000 (15:52 +0200)]
SIMIX call + MSG function + Java binding for get_core

6 years agomodel-checker : restore while statement for bugged1_liveness example
Marion Guthmuller [Thu, 13 Jun 2013 13:00:53 +0000 (15:00 +0200)]
model-checker : restore while statement for bugged1_liveness example

6 years agoMerge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/simgrid/simgrid
Jonathan Rouzaud-Cornabas [Thu, 13 Jun 2013 12:50:23 +0000 (14:50 +0200)]
Merge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/simgrid/simgrid

6 years agoProperties available for cluster tag
Jonathan Rouzaud-Cornabas [Thu, 13 Jun 2013 12:49:59 +0000 (14:49 +0200)]
Properties available for cluster tag

6 years agomodel-checker : update bugged1 and bugged2 tesh (different compilation flags)
Marion Guthmuller [Thu, 13 Jun 2013 10:45:47 +0000 (12:45 +0200)]
model-checker : update bugged1 and bugged2 tesh (different compilation flags)

6 years agomodel-checker : MC doesn't work with thread context
Marion Guthmuller [Thu, 13 Jun 2013 10:44:45 +0000 (12:44 +0200)]
model-checker : MC doesn't work with thread context

6 years agodisable optimizations for build MC in jenkins
Marion Guthmuller [Thu, 13 Jun 2013 10:30:47 +0000 (12:30 +0200)]
disable optimizations for build MC in jenkins

6 years agounused variable if tracing disabled
Marion Guthmuller [Thu, 13 Jun 2013 10:29:40 +0000 (12:29 +0200)]
unused variable if tracing disabled

6 years agomodel-checker : increase timeout in tesh
Marion Guthmuller [Thu, 13 Jun 2013 10:15:31 +0000 (12:15 +0200)]
model-checker : increase timeout in tesh

6 years agomodel-checker : missing #ifdef
Marion Guthmuller [Thu, 13 Jun 2013 10:08:21 +0000 (12:08 +0200)]
model-checker : missing #ifdef

6 years agomodel-checker : update bugged2 tesh
Marion Guthmuller [Thu, 13 Jun 2013 09:38:02 +0000 (11:38 +0200)]
model-checker : update bugged2 tesh

6 years agomodel-checker : fix (again ..) DPOR for iSend/iRecv and Wait communications
Marion Guthmuller [Thu, 13 Jun 2013 07:21:52 +0000 (09:21 +0200)]
model-checker : fix (again ..) DPOR for iSend/iRecv and Wait communications

- add rdv_cpy in s_smx_action_t structure. comm.rdv is used for
  garbage collection and set to NULL when the communication matches
  with another communication already pushed and waiting in the
  mailbox.
- iSend/iRecv and Wait communications are independant if the
  communications are not in the same mailbox. Otherwise, the
  iSend/iRecv communication process issuer must be different of the
  src_proc or dst_proc of the Wait communication, or, src_buff and
  dst_buff of the communications must be different.

6 years agomodel-checker : improve debug messages
Marion Guthmuller [Wed, 12 Jun 2013 16:30:23 +0000 (18:30 +0200)]
model-checker : improve debug messages

6 years agobarrier tests
degomme [Thu, 13 Jun 2013 09:36:43 +0000 (11:36 +0200)]
barrier tests

6 years agoend of ompi collectives addition, with barrier
degomme [Thu, 13 Jun 2013 09:36:27 +0000 (11:36 +0200)]
end of ompi collectives addition, with barrier

6 years agoadd tests for scatter
degomme [Thu, 13 Jun 2013 07:36:03 +0000 (09:36 +0200)]
add tests for scatter

6 years agoadd scatter algos from ompi
degomme [Thu, 13 Jun 2013 07:26:51 +0000 (09:26 +0200)]
add scatter algos from ompi

6 years agounused variable
degomme [Thu, 13 Jun 2013 00:08:58 +0000 (02:08 +0200)]
unused variable

6 years agoMerge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/simgrid/simgrid
degomme [Thu, 13 Jun 2013 00:03:47 +0000 (02:03 +0200)]
Merge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/simgrid/simgrid

6 years agoadd reduce scatter collectives from openmpi, and fix existing one
degomme [Wed, 12 Jun 2013 23:57:57 +0000 (01:57 +0200)]
add reduce scatter collectives from openmpi, and fix existing one
and add tests, without doing separate commits because it is 2AM

6 years agoMerge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/simgrid/simgrid
Jonathan Rouzaud-Cornabas [Wed, 12 Jun 2013 15:13:46 +0000 (17:13 +0200)]
Merge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/simgrid/simgrid

6 years agofix Node.java
Jonathan Rouzaud-Cornabas [Wed, 12 Jun 2013 15:13:37 +0000 (17:13 +0200)]
fix Node.java

6 years agoSimplify the link specifications for libSG_java on win32 (untested).
Arnaud Giersch [Wed, 12 Jun 2013 12:34:57 +0000 (14:34 +0200)]
Simplify the link specifications for libSG_java on win32 (untested).

The variable SIMGRID_LIB_NAME_NAME is never used, and probably gets an
undefined value here.  Remove its definition.

The variable SIMGRID_LIB_NAME is never set.  Remove reference to it.

Finally, use "target_link_libraries" for all platforms since I can't find any
reason to avoid it on win32.

Note that these changes are untested.

6 years agoPrototypes were changed by previous commit.
Arnaud Giersch [Wed, 12 Jun 2013 12:32:10 +0000 (14:32 +0200)]
Prototypes were changed by previous commit.

6 years agofurther simplification of the storage API, keep size only as nmemb was
suter [Wed, 12 Jun 2013 11:28:03 +0000 (13:28 +0200)]
further simplification of the storage API, keep size only as nmemb was
never really used.

6 years agoUse correct modifier, and don't lie about pointer type.
Arnaud Giersch [Wed, 12 Jun 2013 09:49:54 +0000 (11:49 +0200)]
Use correct modifier, and don't lie about pointer type.

6 years agoAddress compilation warnings.
Arnaud Giersch [Wed, 12 Jun 2013 09:42:08 +0000 (11:42 +0200)]
Address compilation warnings.

6 years agoAdd CMakeLists.txt for examples/msg/semaphores/.
Arnaud Giersch [Wed, 12 Jun 2013 09:26:31 +0000 (11:26 +0200)]
Add CMakeLists.txt for examples/msg/semaphores/.

6 years agoSort entries.
Arnaud Giersch [Wed, 12 Jun 2013 09:25:27 +0000 (11:25 +0200)]
Sort entries.

6 years agoAdd files to the dist archive.
Arnaud Giersch [Wed, 12 Jun 2013 09:25:13 +0000 (11:25 +0200)]
Add files to the dist archive.

6 years agoThis file doesn't belong to the dist archive.
Arnaud Giersch [Wed, 12 Jun 2013 09:24:37 +0000 (11:24 +0200)]
This file doesn't belong to the dist archive.

6 years agoUse real parameter name in comment.
Arnaud Giersch [Wed, 12 Jun 2013 09:13:52 +0000 (11:13 +0200)]
Use real parameter name in comment.

6 years agoAS access from MSG layer
Jonathan Rouzaud-Cornabas [Wed, 12 Jun 2013 06:37:41 +0000 (08:37 +0200)]
AS access from MSG layer

6 years agoremove warnings 2
Augustin Degomme [Tue, 11 Jun 2013 22:27:39 +0000 (00:27 +0200)]
remove warnings 2

6 years agoremove warnings
Augustin Degomme [Tue, 11 Jun 2013 22:07:48 +0000 (00:07 +0200)]
remove warnings

6 years agoRemove debuging printf
Paul Bédaride [Fri, 7 Jun 2013 07:21:37 +0000 (09:21 +0200)]
Remove debuging printf

6 years agoFix jmsg_as getSons
Jonathan Rouzaud-Cornabas [Fri, 7 Jun 2013 00:28:39 +0000 (02:28 +0200)]
Fix jmsg_as getSons

6 years agoAdd msg As getModel and GetHosts
Paul Bédaride [Thu, 6 Jun 2013 21:33:25 +0000 (23:33 +0200)]
Add msg As getModel and GetHosts

6 years agoAdd missing files
Paul Bédaride [Thu, 6 Jun 2013 19:51:32 +0000 (21:51 +0200)]
Add missing files

6 years agoAccess AS hierarchy at Msg layer
Paul Bédaride [Thu, 6 Jun 2013 16:57:26 +0000 (18:57 +0200)]
Access AS hierarchy at Msg layer

6 years agoadd test for gather collectives
Augustin Degomme [Tue, 11 Jun 2013 15:53:17 +0000 (17:53 +0200)]
add test for gather collectives

6 years agoadd gather collectives from ompi
Augustin Degomme [Tue, 11 Jun 2013 15:49:46 +0000 (17:49 +0200)]
add gather collectives from ompi

6 years agoFix bug happening with MPI_Datatypes
Augustin Degomme [Tue, 11 Jun 2013 14:14:10 +0000 (16:14 +0200)]
Fix bug happening with MPI_Datatypes
Provide better support for contiguous datatypes

6 years agoadd allgatherv algo from ompi
Augustin Degomme [Tue, 11 Jun 2013 13:26:33 +0000 (15:26 +0200)]
add allgatherv algo from ompi

6 years agoadd new allgather algo from ompi
Augustin Degomme [Tue, 11 Jun 2013 09:02:21 +0000 (11:02 +0200)]
add new allgather algo from ompi

6 years agosize_t instead of unsigned long for storage size and used_size
suter [Tue, 11 Jun 2013 13:21:42 +0000 (15:21 +0200)]
size_t instead of unsigned long for storage size and used_size

6 years agosimplify the simcall stack for file unlink
suter [Tue, 11 Jun 2013 12:59:53 +0000 (14:59 +0200)]
simplify the simcall stack for file unlink
there are still a few leaks: as unlink does not totally destroy the
data structures. If the same file descriptor is reopened (new file is
created), here comes the leak ...

6 years agothere is no stat on files anymore
suter [Tue, 11 Jun 2013 08:55:07 +0000 (10:55 +0200)]
there is no stat on files anymore

6 years agocleaning step: uniform naming (stream to fd) + some cuts at 80
suter [Tue, 11 Jun 2013 08:49:21 +0000 (10:49 +0200)]
cleaning step: uniform naming (stream to fd) + some cuts at 80
characters

6 years agoone parameter less for open
suter [Tue, 11 Jun 2013 08:47:06 +0000 (10:47 +0200)]
one parameter less for open

6 years agoget rid of mode for open in Java bindings too
suter [Tue, 11 Jun 2013 08:45:42 +0000 (10:45 +0200)]
get rid of mode for open in Java bindings too

6 years agoget rid of "mode" parameter in the open file function. It wasn't used
suter [Tue, 11 Jun 2013 08:28:09 +0000 (10:28 +0200)]
get rid of "mode" parameter in the open file function. It wasn't used
anyway.

6 years agoadd missing file in dist
Augustin Degomme [Tue, 11 Jun 2013 08:13:14 +0000 (10:13 +0200)]
add missing file in dist

6 years agoremove warning
Augustin Degomme [Tue, 11 Jun 2013 08:06:54 +0000 (10:06 +0200)]
remove warning

6 years agoremove warning
degomme [Tue, 11 Jun 2013 00:03:22 +0000 (02:03 +0200)]
remove warning

6 years agoadd new algos for reduce from ompi
degomme [Mon, 10 Jun 2013 23:59:42 +0000 (01:59 +0200)]
add new algos for reduce from ompi

6 years agoadd another ompi bcast algo
degomme [Mon, 10 Jun 2013 20:41:53 +0000 (22:41 +0200)]
add another ompi bcast algo

6 years agoadd one more bcast algo
Augustin Degomme [Mon, 10 Jun 2013 16:13:37 +0000 (18:13 +0200)]
add one more bcast algo

6 years agouseless line
Augustin Degomme [Mon, 10 Jun 2013 15:11:17 +0000 (17:11 +0200)]
useless line

6 years agoadd tests for ompi selector
Augustin Degomme [Mon, 10 Jun 2013 14:07:00 +0000 (16:07 +0200)]
add tests for ompi selector

6 years agoadd a new allreduce algorithm from openmpi
Augustin Degomme [Mon, 10 Jun 2013 14:06:13 +0000 (16:06 +0200)]
add a new allreduce algorithm from openmpi

6 years agoactivate commute flag for MPI_Op, adds smpi_op_is_commute to test it (-1 FIXME !)
Augustin Degomme [Mon, 10 Jun 2013 12:50:10 +0000 (14:50 +0200)]
activate commute flag for MPI_Op, adds smpi_op_is_commute to test it (-1 FIXME !)