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17 months agoremove reference to glibc malloc functions, as they are not portable.
Augustin Degomme [Fri, 3 Aug 2018 18:33:27 +0000 (20:33 +0200)]
remove reference to glibc malloc functions, as they are not portable.
Instead move implementation of the wrappers before the include containing '#define malloc _sampi_malloc' to avoid looping

17 months agoplease bsd systems
Augustin Degomme [Fri, 3 Aug 2018 13:22:33 +0000 (15:22 +0200)]
please bsd systems

17 months agofix distcheck. Add docs folder to excludes for now
Augustin Degomme [Fri, 3 Aug 2018 13:09:44 +0000 (15:09 +0200)]
fix distcheck. Add docs folder to excludes for now

17 months ago[SMPI] Add sampi.h header
Christian Heinrich [Fri, 3 Aug 2018 12:01:35 +0000 (14:01 +0200)]
[SMPI] Add sampi.h header

17 months ago[SMPI] Fix datatype to aid_t instead of int
Christian Heinrich [Fri, 3 Aug 2018 11:16:11 +0000 (13:16 +0200)]
[SMPI] Fix datatype to aid_t instead of int

17 months ago[CMAKE] Add load_balancer.hpp to cmake
Christian Heinrich [Fri, 3 Aug 2018 10:43:14 +0000 (12:43 +0200)]
[CMAKE] Add load_balancer.hpp to cmake

17 months ago[EX/SMPI/LB] Install src file correctly
Christian Heinrich [Fri, 3 Aug 2018 09:16:48 +0000 (11:16 +0200)]
[EX/SMPI/LB] Install src file correctly

17 months ago[SMPI/AMPI] Make AMPI examples work and install correctly
Christian Heinrich [Fri, 3 Aug 2018 09:16:23 +0000 (11:16 +0200)]
[SMPI/AMPI] Make AMPI examples work and install correctly

17 months ago[EXAMPLES/LB] Disable non-existing LB-replay test
Christian Heinrich [Fri, 3 Aug 2018 09:03:01 +0000 (11:03 +0200)]
[EXAMPLES/LB] Disable non-existing LB-replay test

17 months ago[CMAKE] Well, remove privatized header...
Christian Heinrich [Fri, 3 Aug 2018 08:55:06 +0000 (10:55 +0200)]
[CMAKE] Well, remove privatized header...

17 months ago[SMPI/LB] Small cleanups
Christian Heinrich [Fri, 3 Aug 2018 08:54:12 +0000 (10:54 +0200)]
[SMPI/LB] Small cleanups

17 months ago[DVFS] Move comment + change get_host() visibility
Christian Heinrich [Thu, 2 Aug 2018 19:28:55 +0000 (21:28 +0200)]
[DVFS] Move comment + change get_host() visibility

17 months ago[SMPI/LB] Make LB + Mapping classes XBT_PRIVATE
Christian Heinrich [Thu, 2 Aug 2018 19:26:23 +0000 (21:26 +0200)]
[SMPI/LB] Make LB + Mapping classes XBT_PRIVATE

17 months ago[SMPI/LB] Make header file private
Christian Heinrich [Thu, 2 Aug 2018 16:11:51 +0000 (18:11 +0200)]
[SMPI/LB] Make header file private

17 months ago[CMAKE] Add new ampi files to cmake. This should build now
Christian Heinrich [Thu, 2 Aug 2018 15:32:17 +0000 (17:32 +0200)]
[CMAKE] Add new ampi files to cmake. This should build now

17 months ago[SAMPI] Move ampi signals to simgrid::smpi::plugin::ampi
Christian Heinrich [Thu, 2 Aug 2018 15:29:30 +0000 (17:29 +0200)]
[SAMPI] Move ampi signals to simgrid::smpi::plugin::ampi

This will still not build, but it is simpler to to see the changes with smaller commits

17 months ago[SAMPI] Move tracing functions definitions to instr_ampi.cpp
Christian Heinrich [Thu, 2 Aug 2018 15:28:47 +0000 (17:28 +0200)]
[SAMPI] Move tracing functions definitions to instr_ampi.cpp

This will still not build, but it is simpler to to see the changes with smaller commits

17 months ago[SAMPI] Move tracing functions to instr_ampi.hpp
Christian Heinrich [Thu, 2 Aug 2018 15:25:30 +0000 (17:25 +0200)]
[SAMPI] Move tracing functions to instr_ampi.hpp

This will not build, but it is simpler to to see where the functions went

17 months ago[SAMPI] Rename example from load_balancer to AMPI
Christian Heinrich [Thu, 2 Aug 2018 13:58:37 +0000 (15:58 +0200)]
[SAMPI] Rename example from load_balancer to AMPI

This has nothing to do with the LB, just with AMPI

17 months ago[SAMPI] Rename from sampi_pampi.cpp to ampi/ampi.cpp
Christian Heinrich [Thu, 2 Aug 2018 09:14:53 +0000 (11:14 +0200)]
[SAMPI] Rename from sampi_pampi.cpp to ampi/ampi.cpp

17 months ago[SMPI/LB] Add comment noting that an arg must not be 0
Christian Heinrich [Thu, 2 Aug 2018 15:32:53 +0000 (17:32 +0200)]
[SMPI/LB] Add comment noting that an arg must not be 0

17 months ago[SMPI/LB] Check migration counter before the LB execution
Christian Heinrich [Thu, 19 Jul 2018 09:03:46 +0000 (11:03 +0200)]
[SMPI/LB] Check migration counter before the LB execution

17 months ago[SMPI/LB] Implement GreedyLB with a Fibonacci Heap
Christian Heinrich [Tue, 17 Jul 2018 11:39:27 +0000 (13:39 +0200)]
[SMPI/LB] Implement GreedyLB with a Fibonacci Heap

17 months ago[SMPI/LB] Use mapping class within the LB
Christian Heinrich [Tue, 17 Jul 2018 11:38:39 +0000 (13:38 +0200)]
[SMPI/LB] Use mapping class within the LB

17 months ago[EXAMPLES/LB] Add a replay example for the LB plugin
Christian Heinrich [Thu, 14 Jun 2018 09:21:43 +0000 (11:21 +0200)]
[EXAMPLES/LB] Add a replay example for the LB plugin

17 months ago[CMAKE] Activate LB example
Christian Heinrich [Thu, 14 Jun 2018 08:39:34 +0000 (10:39 +0200)]
[CMAKE] Activate LB example

17 months ago[CMAKE] Add the LoadBalancer file to cmake
Christian Heinrich [Thu, 14 Jun 2018 08:39:16 +0000 (10:39 +0200)]
[CMAKE] Add the LoadBalancer file to cmake

17 months ago[Plugins/LB] Add LoadBalancer class
Christian Heinrich [Thu, 14 Jun 2018 09:23:09 +0000 (11:23 +0200)]
[Plugins/LB] Add LoadBalancer class

17 months ago[SAMPI] Update the sampi_loadbalancer code
Christian Heinrich [Wed, 16 May 2018 13:46:05 +0000 (15:46 +0200)]
[SAMPI] Update the sampi_loadbalancer code

This is a first version for our new load balancing
module. It's not yet ready, but we're getting there.

17 months ago[EXAMPLES] Added first example/test for SAMPI (load balancer)
Christian Heinrich [Wed, 16 May 2018 13:41:10 +0000 (15:41 +0200)]
[EXAMPLES] Added first example/test for SAMPI (load balancer)

17 months ago[CMAKE] Add sampi_pampi.cpp and smpi/sampi.h to cmake
Christian Heinrich [Thu, 28 Jun 2018 12:09:22 +0000 (14:09 +0200)]
[CMAKE] Add sampi_pampi.cpp and smpi/sampi.h to cmake

17 months ago[SMPI/LB] Add files load_balancer.hpp and smpi/sampi.h
Christian Heinrich [Thu, 28 Jun 2018 12:08:22 +0000 (14:08 +0200)]
[SMPI/LB] Add files load_balancer.hpp and smpi/sampi.h

17 months ago[SAMPI] Add sampi_pampi.cpp
Christian Heinrich [Wed, 16 May 2018 13:43:02 +0000 (15:43 +0200)]
[SAMPI] Add sampi_pampi.cpp

This file contains the implementation for several PAMPI_* functions

17 months ago[SMPI] Add 3 tracing functions for SAMPI
Christian Heinrich [Wed, 16 May 2018 13:24:48 +0000 (15:24 +0200)]
[SMPI] Add 3 tracing functions for SAMPI

- TRACE_Iteration_in
- TRACE_Iteration_out
- TRACE_migration_call

17 months ago[SAMPI] Added AmpiMigrateTIData
Christian Heinrich [Wed, 16 May 2018 13:22:31 +0000 (15:22 +0200)]
[SAMPI] Added AmpiMigrateTIData

17 months ago[ENERGY] Add new hook to fix issue with communication calls
Christian Heinrich [Fri, 27 Jul 2018 15:34:44 +0000 (17:34 +0200)]
[ENERGY] Add new hook to fix issue with communication calls

See the comment in the commit

17 months ago[SMPI/INSTR] Replace ! with 'not' ...
Christian Heinrich [Thu, 2 Aug 2018 15:30:53 +0000 (17:30 +0200)]
[SMPI/INSTR] Replace ! with 'not' ...

17 months ago[CMAKE] Cosmetics (sort some smpi files)
Christian Heinrich [Thu, 2 Aug 2018 13:41:27 +0000 (15:41 +0200)]
[CMAKE] Cosmetics (sort some smpi files)

17 months agoreduce memory footprint of a test (640MB was a bit too much for some ci vms)
degomme [Thu, 2 Aug 2018 10:49:38 +0000 (12:49 +0200)]
reduce memory footprint of a test (640MB was a bit too much for some ci vms)

17 months agoFix double dashes.
Arnaud Giersch [Wed, 1 Aug 2018 20:06:04 +0000 (22:06 +0200)]
Fix double dashes.

17 months agoadd scripted description update for appveyor and travis
degomme [Wed, 1 Aug 2018 14:40:54 +0000 (16:40 +0200)]
add scripted description update for appveyor and travis

17 months agoadd the dumb script used to update project description on jenkins to the repo
Augustin Degomme [Tue, 31 Jul 2018 20:17:01 +0000 (22:17 +0200)]
add the dumb script used to update project description on jenkins to the repo

17 months agooops
degomme [Tue, 31 Jul 2018 15:52:56 +0000 (17:52 +0200)]
oops

17 months agoadd system detection for ci builds.
degomme [Tue, 31 Jul 2018 15:39:16 +0000 (17:39 +0200)]
add system detection for ci builds.
Not really possible with cmake, so done by hand with help from https://unix.stackexchange.com/questions/6345/how-can-i-get-distribution-name-and-version-number-in-a-simple-shell-script
This will help scripting the description of the slaves

17 months agowoops, revalidate this tesh too
Martin Quinson [Tue, 31 Jul 2018 08:19:04 +0000 (10:19 +0200)]
woops, revalidate this tesh too

17 months agoAutomatically rebuild the pages on git push on framagit
Martin Quinson [Tue, 31 Jul 2018 08:05:58 +0000 (10:05 +0200)]
Automatically rebuild the pages on git push on framagit

17 months agocosmetics in error message
Martin Quinson [Tue, 31 Jul 2018 00:35:47 +0000 (02:35 +0200)]
cosmetics in error message

17 months agosimplify this example
Martin Quinson [Tue, 31 Jul 2018 00:35:36 +0000 (02:35 +0200)]
simplify this example

17 months agocleanups in sphinx config file
Martin Quinson [Mon, 30 Jul 2018 21:22:24 +0000 (23:22 +0200)]
cleanups in sphinx config file

17 months agoMerge branch 'master' of scm.gforge.inria.fr:/gitroot/simgrid/simgrid
Martin Quinson [Mon, 30 Jul 2018 21:21:17 +0000 (23:21 +0200)]
Merge branch 'master' of scm.gforge.inria.fr:/gitroot/simgrid/simgrid

17 months agodoc: convert another chapter to RST
Martin Quinson [Mon, 30 Jul 2018 21:12:19 +0000 (23:12 +0200)]
doc: convert another chapter to RST

17 months agoGet the documentation to build on RTD
Martin Quinson [Mon, 30 Jul 2018 20:07:48 +0000 (22:07 +0200)]
Get the documentation to build on RTD

17 months agodoc: 'installation' converted to RST
Martin Quinson [Mon, 30 Jul 2018 17:46:55 +0000 (19:46 +0200)]
doc: 'installation' converted to RST

17 months agodoc: Main concepts
Martin Quinson [Mon, 30 Jul 2018 17:46:25 +0000 (19:46 +0200)]
doc: Main concepts

17 months agobasic sphinx/breathe configuration for the documentation
Martin Quinson [Mon, 30 Jul 2018 17:44:13 +0000 (19:44 +0200)]
basic sphinx/breathe configuration for the documentation

17 months agoplug leaks... Still don't like what's done here, it will need a good rewrite.
Augustin Degomme [Mon, 30 Jul 2018 13:29:30 +0000 (15:29 +0200)]
plug leaks... Still don't like what's done here, it will need a good rewrite.

17 months agouniformity in Activity cancel()
Frederic Suter [Sat, 28 Jul 2018 23:13:04 +0000 (01:13 +0200)]
uniformity in Activity cancel()

17 months agoMerge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/simgrid/simgrid
Frederic Suter [Sat, 28 Jul 2018 22:25:50 +0000 (00:25 +0200)]
Merge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/simgrid/simgrid

17 months agotest exec->cancel() and simplify another test
Frederic Suter [Sat, 28 Jul 2018 22:24:54 +0000 (00:24 +0200)]
test exec->cancel() and simplify another test

17 months agoallow to cancel a s4u::Exec
Frederic Suter [Sat, 28 Jul 2018 22:23:50 +0000 (00:23 +0200)]
allow to cancel a s4u::Exec

17 months agoCannot use range-based for loop when container is modified.
Arnaud Giersch [Sat, 28 Jul 2018 21:48:03 +0000 (23:48 +0200)]
Cannot use range-based for loop when container is modified.

17 months agoOne more filtered lib.
Arnaud Giersch [Sat, 28 Jul 2018 15:52:02 +0000 (17:52 +0200)]
One more filtered lib.

Wonder if we should not use a white list instead.

17 months agofiltered_libraries++
Arnaud Giersch [Fri, 27 Jul 2018 22:05:41 +0000 (00:05 +0200)]
filtered_libraries++

17 months agoFix memory errors.
Arnaud Giersch [Fri, 27 Jul 2018 22:02:02 +0000 (00:02 +0200)]
Fix memory errors.

17 months agoSpurious 'n'.
Arnaud Giersch [Thu, 26 Jul 2018 09:48:11 +0000 (11:48 +0200)]
Spurious 'n'.

17 months agoKeep list of filtered libraries sorted.
Arnaud Giersch [Thu, 26 Jul 2018 08:28:50 +0000 (10:28 +0200)]
Keep list of filtered libraries sorted.

17 months agoRemove useless thread_local.
Arnaud Giersch [Thu, 19 Jul 2018 19:34:46 +0000 (21:34 +0200)]
Remove useless thread_local.

It doesn't make any difference if context/factory is not "thread".

17 months agoas the comment was saying, that was unsafe, and flang was doing something else
Augustin Degomme [Thu, 26 Jul 2018 17:08:05 +0000 (19:08 +0200)]
as the comment was saying, that was unsafe, and flang was doing something else

17 months agoDon't free there for intel compiler, it breaks.
Augustin Degomme [Thu, 26 Jul 2018 16:17:46 +0000 (18:17 +0200)]
Don't free there for intel compiler, it breaks.
Yes, that means leaking.

17 months ago[HostLoad] And lastly: Update the hooks used
Christian Heinrich [Thu, 26 Jul 2018 09:34:43 +0000 (11:34 +0200)]
[HostLoad] And lastly: Update the hooks used

17 months ago[HostLoad] Update the update() method to use ExecImplPtrs
Christian Heinrich [Thu, 26 Jul 2018 09:34:26 +0000 (11:34 +0200)]
[HostLoad] Update the update() method to use ExecImplPtrs

These ptrs are stored in the class, see the previous commit

17 months ago[HostLoad] Add method HostLoad::add_activity(ExecImplPtr)
Christian Heinrich [Thu, 26 Jul 2018 09:22:22 +0000 (11:22 +0200)]
[HostLoad] Add method HostLoad::add_activity(ExecImplPtr)

The HostLoad plugin keeps track of all the computations that are going on
and does no longer have to rely on calculations of the sort time_passed*speed.

Instead, we can now access the total cost of the computation and keep track
of how much is still remaining. Like this, we always account for exactly
the cost of that calculation.

17 months ago[HostLoad] Update when calling getters
Christian Heinrich [Thu, 26 Jul 2018 09:16:41 +0000 (11:16 +0200)]
[HostLoad] Update when calling getters

This will allow us to remove the CpuAction hook and replace it with
hooks that are only used after a calculation has completed.

If for instance a daemon (dvfs, load balancer, ...) wants to get
up-to-date information, this is now assured through the update call.

17 months ago[HostLoad] Update comments + add debug statement
Christian Heinrich [Thu, 26 Jul 2018 09:12:55 +0000 (11:12 +0200)]
[HostLoad] Update comments + add debug statement

17 months ago[HostLoad] Elaborate on comment
Christian Heinrich [Thu, 26 Jul 2018 07:48:37 +0000 (09:48 +0200)]
[HostLoad] Elaborate on comment

17 months ago[HostLoad] Remove wrong 'was_prev_idle' notion
Christian Heinrich [Mon, 23 Jul 2018 13:07:01 +0000 (15:07 +0200)]
[HostLoad] Remove wrong 'was_prev_idle' notion

The load is only updated after a call to LMM; this means, that
we get the real load the action caused by querying the constraint
and we don't need to have a variable for that state.

17 months ago[ENERGY] Remove HostLoad-plugin dependency
Christian Heinrich [Thu, 26 Jul 2018 14:38:26 +0000 (16:38 +0200)]
[ENERGY] Remove HostLoad-plugin dependency

17 months ago[SURF] Cosmetics for CpuAction
Christian Heinrich [Mon, 23 Jul 2018 09:40:44 +0000 (11:40 +0200)]
[SURF] Cosmetics for CpuAction

17 months agomissed one
Augustin Degomme [Thu, 26 Jul 2018 13:08:48 +0000 (15:08 +0200)]
missed one

17 months agomake a copy of args for each process
Augustin Degomme [Thu, 26 Jul 2018 12:52:17 +0000 (14:52 +0200)]
make a copy of args for each process
Not optimal as it's only for fortran (ifort) that it's useful.
Done this way to see if it helps flang as well

17 months agoadd another library to excludes to please mc
Augustin Degomme [Thu, 26 Jul 2018 09:18:43 +0000 (11:18 +0200)]
add another library to excludes to please mc

17 months agoMerge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/simgrid/simgrid
Frederic Suter [Thu, 26 Jul 2018 08:22:49 +0000 (10:22 +0200)]
Merge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/simgrid/simgrid

17 months agoadd libraries to excludes to please mc
Augustin Degomme [Thu, 26 Jul 2018 08:22:13 +0000 (10:22 +0200)]
add libraries to excludes to please mc

17 months agosonar
Frederic Suter [Thu, 26 Jul 2018 07:51:00 +0000 (09:51 +0200)]
sonar

17 months agoMerge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/simgrid/simgrid
Frederic Suter [Thu, 26 Jul 2018 07:09:02 +0000 (09:09 +0200)]
Merge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/simgrid/simgrid

17 months agoSometimes C and fortran compiler family differs...
Augustin Degomme [Wed, 25 Jul 2018 23:57:28 +0000 (01:57 +0200)]
Sometimes C and fortran compiler family differs...
Try to get around that.. Ugly for now.

17 months agoflang also does need some help
Augustin Degomme [Wed, 25 Jul 2018 23:52:29 +0000 (01:52 +0200)]
flang also does need some help

17 months agoforgot to change here
Augustin Degomme [Wed, 25 Jul 2018 23:14:07 +0000 (01:14 +0200)]
forgot to change here

17 months agointel somehow also matches __GNUC__
Augustin Degomme [Wed, 25 Jul 2018 22:57:34 +0000 (00:57 +0200)]
intel somehow also matches __GNUC__

17 months agoadd test for fortran params ... Not with MPI, but it should not change anything
Augustin Degomme [Wed, 25 Jul 2018 22:19:03 +0000 (00:19 +0200)]
add test for fortran params ... Not with MPI, but it should not change anything

17 months agothese were not used since ... well .. a long time
Augustin Degomme [Wed, 25 Jul 2018 22:17:55 +0000 (00:17 +0200)]
these were not used since ... well .. a long time

17 months agosend argv and argc to fortran runtimes, to allow using getarg
Augustin Degomme [Wed, 25 Jul 2018 22:09:08 +0000 (00:09 +0200)]
send argv and argc to fortran runtimes, to allow using getarg

17 months agosimplifications
Frederic Suter [Wed, 25 Jul 2018 14:48:43 +0000 (16:48 +0200)]
simplifications

17 months agoremove another call to simcall_execution_start
Frederic Suter [Wed, 25 Jul 2018 14:33:59 +0000 (16:33 +0200)]
remove another call to simcall_execution_start

17 months agochanging the way the tracing category is passed to ExecImpl
Frederic Suter [Wed, 25 Jul 2018 14:00:38 +0000 (16:00 +0200)]
changing the way the tracing category is passed to ExecImpl

the former version implied to set the category AFTER the start()
because the ExecImpl had to exist. It was against the idea of "do all
the sets and then starts". Now, the category is set at user level and
then passed to the Impl within the start simcall. Setting a category
after the start is now forbidden.

17 months agostart to snake_case NS3
Martin Quinson [Sun, 22 Jul 2018 21:10:46 +0000 (23:10 +0200)]
start to snake_case NS3

17 months agosnake_case k::r::NetworkConstant
Martin Quinson [Sat, 21 Jul 2018 21:06:04 +0000 (23:06 +0200)]
snake_case k::r::NetworkConstant

17 months agoreduce test size
Augustin Degomme [Tue, 24 Jul 2018 19:55:51 +0000 (21:55 +0200)]
reduce test size

17 months agoRework SMPI initialization to handle argc and argv earlier than in MPI_Init when...
Augustin Degomme [Tue, 24 Jul 2018 19:55:19 +0000 (21:55 +0200)]
Rework SMPI initialization to handle argc and argv earlier than in MPI_Init when possible.
Add support for MPI_Init(NULL,NULL).
Might break MC for now.

18 months agofix the (unoticed) mess I made
Frederic Suter [Tue, 24 Jul 2018 11:15:04 +0000 (13:15 +0200)]
fix the (unoticed) mess I made