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simgrid.git
11 months agoLink Topo and Comm in both directions, and fix memory leak.
Arnaud Giersch [Thu, 5 Dec 2019 15:54:08 +0000 (16:54 +0100)]
Link Topo and Comm in both directions, and fix memory leak.

11 months ago[sonar] Unused parameters.
Arnaud Giersch [Thu, 12 Dec 2019 10:35:21 +0000 (11:35 +0100)]
[sonar] Unused parameters.

11 months agoFix parameter when calling MC_assert.
Arnaud Giersch [Wed, 11 Dec 2019 21:20:41 +0000 (22:20 +0100)]
Fix parameter when calling MC_assert.

A cast to (int) is wrong with e.g. (0.2) or (1UL<<32).

11 months agoFree memory.
Arnaud Giersch [Tue, 10 Dec 2019 15:23:35 +0000 (16:23 +0100)]
Free memory.

11 months agoSimplify valgrind suppressions.
Arnaud Giersch [Tue, 10 Dec 2019 10:53:26 +0000 (11:53 +0100)]
Simplify valgrind suppressions.

11 months agoBe consistent on the number of indirections.
Arnaud Giersch [Tue, 10 Dec 2019 08:23:11 +0000 (09:23 +0100)]
Be consistent on the number of indirections.

11 months agoavoid warnings with SMPI + MC asserts
Augustin Degomme [Wed, 11 Dec 2019 07:23:08 +0000 (08:23 +0100)]
avoid warnings with SMPI + MC asserts

11 months agoactivate tests.
Augustin Degomme [Tue, 10 Dec 2019 23:24:56 +0000 (00:24 +0100)]
activate tests.

11 months agoget rid of CHECK_FLAGS which was not correct.
Augustin Degomme [Tue, 10 Dec 2019 23:24:26 +0000 (00:24 +0100)]
get rid of CHECK_FLAGS which was not correct.

11 months ago"Implement" MPI_File_set_view, MPI_File_get_view.
Augustin Degomme [Tue, 10 Dec 2019 23:23:58 +0000 (00:23 +0100)]
"Implement" MPI_File_set_view, MPI_File_get_view.

11 months agoagain with status
Augustin Degomme [Tue, 10 Dec 2019 19:16:20 +0000 (20:16 +0100)]
again with status

11 months agoappend / to mountpoint when generated
Augustin Degomme [Tue, 10 Dec 2019 19:11:45 +0000 (20:11 +0100)]
append / to mountpoint when generated
(fun fact, it works without it, /scratchtestfile is inside /scratch for us)

11 months agoMPI_STATUS_IGNORE = null, actually.
Augustin Degomme [Tue, 10 Dec 2019 18:50:24 +0000 (19:50 +0100)]
MPI_STATUS_IGNORE = null, actually.

11 months agoupdate manifest
Augustin Degomme [Tue, 10 Dec 2019 17:27:28 +0000 (18:27 +0100)]
update manifest

11 months agofix dist
Augustin Degomme [Tue, 10 Dec 2019 16:21:07 +0000 (17:21 +0100)]
fix dist

11 months agoAllow to use non absolute path in MPI IO.
Augustin Degomme [Tue, 10 Dec 2019 16:16:43 +0000 (17:16 +0100)]
Allow to use non absolute path in MPI IO.
If no / is found in the name, we just pick the first mountpoint we find.

11 months agoAdd io test in mpich testsuite.
Augustin Degomme [Tue, 10 Dec 2019 16:01:35 +0000 (17:01 +0100)]
Add io test in mpich testsuite.
Works, but as files are simulated, content-checking after a read has to be disabled.
Also files have to be opened with an absolute path for now.

11 months agoSMPI-io : check that files are not read when write-only is specified
Augustin Degomme [Tue, 10 Dec 2019 15:13:27 +0000 (16:13 +0100)]
SMPI-io : check that files are not read when write-only is specified

11 months agofix issue with file unlinking
Augustin Degomme [Tue, 10 Dec 2019 15:12:24 +0000 (16:12 +0100)]
fix issue with file unlinking

11 months agocosmetics and damn 32-bit fix
Frederic Suter [Tue, 10 Dec 2019 13:10:53 +0000 (14:10 +0100)]
cosmetics and damn 32-bit fix

11 months agoan enum class of size of 2 is a well named bool
Frederic Suter [Tue, 10 Dec 2019 09:23:31 +0000 (10:23 +0100)]
an enum class of size of 2 is a well named bool

11 months agoSIMIX_display_process_status becomes Global::display_all_actor_status
Frederic Suter [Tue, 10 Dec 2019 09:03:36 +0000 (10:03 +0100)]
SIMIX_display_process_status becomes Global::display_all_actor_status

11 months agoa few process to actor changes
Frederic Suter [Tue, 10 Dec 2019 08:36:34 +0000 (09:36 +0100)]
a few process to actor changes

11 months agonamespacing cleanups
Frederic Suter [Tue, 10 Dec 2019 08:10:42 +0000 (09:10 +0100)]
namespacing cleanups

11 months agoplease sonar and codefactor
Augustin Degomme [Tue, 10 Dec 2019 08:56:35 +0000 (09:56 +0100)]
please sonar and codefactor

11 months agoplease sonar
Augustin Degomme [Tue, 10 Dec 2019 07:54:36 +0000 (08:54 +0100)]
please sonar

11 months agoinput sanitization continued.
Augustin Degomme [Tue, 10 Dec 2019 01:10:08 +0000 (02:10 +0100)]
input sanitization continued.

11 months agoUnify input checking using shared macros. Avoid repeating code.
Augustin Degomme [Mon, 9 Dec 2019 17:43:42 +0000 (18:43 +0100)]
Unify input checking using shared macros. Avoid repeating code.

11 months agotidy up PropertyHolder
Frederic Suter [Mon, 9 Dec 2019 16:15:48 +0000 (17:15 +0100)]
tidy up PropertyHolder
+ change namespace
+ move files
+ use it for netzones too

11 months agodocument new feature for disks
Frederic Suter [Mon, 9 Dec 2019 16:15:32 +0000 (17:15 +0100)]
document new feature for disks

11 months agoplease codefactor
Augustin Degomme [Mon, 9 Dec 2019 14:19:26 +0000 (15:19 +0100)]
please codefactor

11 months agoAdd more macros for input validation for colls.
Augustin Degomme [Mon, 9 Dec 2019 10:24:21 +0000 (11:24 +0100)]
Add more macros for input validation for colls.
Much cleaner this way.

11 months agogive access to disk's read and write (nomimal) bandwidth values
Frederic Suter [Mon, 9 Dec 2019 10:52:58 +0000 (11:52 +0100)]
give access to disk's read and write (nomimal) bandwidth values

11 months agoanother bunch of codefactor style issues
Frederic Suter [Mon, 9 Dec 2019 09:39:05 +0000 (10:39 +0100)]
another bunch of codefactor style issues

11 months agoUse CHECK_ARGS for more collectives.
Augustin Degomme [Mon, 9 Dec 2019 00:41:41 +0000 (01:41 +0100)]
Use CHECK_ARGS for more collectives.
(absolutely not to hide complexity from analyzers)
Will finish another day.

11 months agoSimplify (and maybe correct) script.
Arnaud Giersch [Sun, 8 Dec 2019 21:14:30 +0000 (22:14 +0100)]
Simplify (and maybe correct) script.

11 months agoAvoid looping over single, constant value (codefactor.io/ShellCheck).
Arnaud Giersch [Sun, 8 Dec 2019 20:32:34 +0000 (21:32 +0100)]
Avoid looping over single, constant value (codefactor.io/ShellCheck).

11 months agoFix portability issues in shellscripts (codefactor.io/ShellCheck).
Arnaud Giersch [Sat, 7 Dec 2019 22:16:13 +0000 (23:16 +0100)]
Fix portability issues in shellscripts (codefactor.io/ShellCheck).

11 months agocosmetics (codefactor+coding style)
Frederic Suter [Sun, 8 Dec 2019 14:19:55 +0000 (15:19 +0100)]
cosmetics (codefactor+coding style)

11 months agoinstall version.h (take 2)
Frederic Suter [Fri, 6 Dec 2019 16:09:10 +0000 (17:09 +0100)]
install version.h (take 2)

11 months agoinstall version.h
Frederic Suter [Fri, 6 Dec 2019 15:58:03 +0000 (16:58 +0100)]
install version.h

11 months agocodefactor: remove trailing newlines
Martin Quinson [Fri, 6 Dec 2019 14:48:52 +0000 (15:48 +0100)]
codefactor: remove trailing newlines

11 months agofix version detection after file change
Frederic Suter [Fri, 6 Dec 2019 14:41:31 +0000 (15:41 +0100)]
fix version detection after file change

11 months agostill some missing includes.
Augustin Degomme [Fri, 6 Dec 2019 13:39:24 +0000 (14:39 +0100)]
still some missing includes.

11 months agoinclude version.h for python bindings too
Frederic Suter [Fri, 6 Dec 2019 13:01:11 +0000 (14:01 +0100)]
include version.h for python bindings too

11 months agoadd missing include for smpi_options
Frederic Suter [Fri, 6 Dec 2019 12:21:56 +0000 (13:21 +0100)]
add missing include for smpi_options

11 months agoadd missing include for smpi_options
Frederic Suter [Fri, 6 Dec 2019 12:21:56 +0000 (13:21 +0100)]
add missing include for smpi_options

11 months agoMerge branch 'master' of https://framagit.org/simgrid/simgrid
Frederic Suter [Fri, 6 Dec 2019 11:50:14 +0000 (12:50 +0100)]
Merge branch 'master' of https://framagit.org/simgrid/simgrid

11 months agosmpi_init_options needs to be public
Augustin Degomme [Fri, 6 Dec 2019 11:23:17 +0000 (12:23 +0100)]
smpi_init_options needs to be public

11 months agoMerge branch 'master' of https://framagit.org/simgrid/simgrid
Frederic Suter [Fri, 6 Dec 2019 08:33:57 +0000 (09:33 +0100)]
Merge branch 'master' of https://framagit.org/simgrid/simgrid

11 months agoHAVE_SMPI is always defined (maybe to 0).
Arnaud Giersch [Fri, 6 Dec 2019 08:18:11 +0000 (09:18 +0100)]
HAVE_SMPI is always defined (maybe to 0).

11 months agoReplace non-breaking spaces.
Arnaud Giersch [Thu, 5 Dec 2019 21:06:21 +0000 (22:06 +0100)]
Replace non-breaking spaces.

11 months ago[cpplint] Omit template arguments for make_pair.
Arnaud Giersch [Thu, 5 Dec 2019 20:28:48 +0000 (21:28 +0100)]
[cpplint] Omit template arguments for make_pair.

11 months agoQualifier "virtual" is redundant with "override".
Arnaud Giersch [Thu, 5 Dec 2019 20:22:44 +0000 (21:22 +0100)]
Qualifier "virtual" is redundant with "override".

11 months agoMerge branch 'master' of https://framagit.org/simgrid/simgrid
Frederic Suter [Thu, 5 Dec 2019 16:03:47 +0000 (17:03 +0100)]
Merge branch 'master' of https://framagit.org/simgrid/simgrid

11 months agoAvoid division by zero.
Arnaud Giersch [Thu, 5 Dec 2019 14:26:23 +0000 (15:26 +0100)]
Avoid division by zero.

Problem seen on manjaro with mc-bugged1-liveness-ucontext and mc-bugged1-liveness-visited-ucontext.

11 months agoMerge branch 'master' of https://framagit.org/simgrid/simgrid
Frederic Suter [Thu, 5 Dec 2019 13:07:45 +0000 (14:07 +0100)]
Merge branch 'master' of https://framagit.org/simgrid/simgrid

11 months agoDeclare variables and allocate memory when needed (plug a memory leak).
Arnaud Giersch [Thu, 5 Dec 2019 12:40:33 +0000 (13:40 +0100)]
Declare variables and allocate memory when needed (plug a memory leak).

11 months agoReindent.
Arnaud Giersch [Thu, 5 Dec 2019 12:36:39 +0000 (13:36 +0100)]
Reindent.

11 months agoFix memory leak.
Arnaud Giersch [Thu, 5 Dec 2019 12:33:30 +0000 (13:33 +0100)]
Fix memory leak.

11 months agoFree dynamically allocated memory.
Arnaud Giersch [Thu, 5 Dec 2019 12:32:53 +0000 (13:32 +0100)]
Free dynamically allocated memory.

11 months agoFree communicators.
Arnaud Giersch [Thu, 5 Dec 2019 09:32:33 +0000 (10:32 +0100)]
Free communicators.

11 months agoReindent + minor stylistic issues.
Arnaud Giersch [Thu, 5 Dec 2019 09:32:33 +0000 (10:32 +0100)]
Reindent + minor stylistic issues.

11 months agoFactor code to get and resize temporary shared mem regions in smpi.
Arnaud Giersch [Thu, 5 Dec 2019 09:32:33 +0000 (10:32 +0100)]
Factor code to get and resize temporary shared mem regions in smpi.

11 months agoAvoid non-standard statement expressions.
Arnaud Giersch [Thu, 5 Dec 2019 09:32:33 +0000 (10:32 +0100)]
Avoid non-standard statement expressions.

11 months agoUnused variables.
Arnaud Giersch [Thu, 5 Dec 2019 09:32:33 +0000 (10:32 +0100)]
Unused variables.

11 months agoMissing include.
Arnaud Giersch [Thu, 5 Dec 2019 09:32:33 +0000 (10:32 +0100)]
Missing include.

11 months agoMerge branch 'master' of https://framagit.org/simgrid/simgrid
Frederic Suter [Thu, 5 Dec 2019 08:14:40 +0000 (09:14 +0100)]
Merge branch 'master' of https://framagit.org/simgrid/simgrid

11 months agofix build with MC + no SMPI
Augustin Degomme [Thu, 5 Dec 2019 06:41:46 +0000 (07:41 +0100)]
fix build with MC + no SMPI

11 months agoMerge branch 'doc' into 'master'
Martin Quinson [Wed, 4 Dec 2019 23:57:10 +0000 (00:57 +0100)]
Merge branch 'doc' into 'master'

Fix link in Mutex doc

See merge request simgrid/simgrid!25

11 months agoremove debug stuff added by mistake...
Augustin Degomme [Wed, 4 Dec 2019 21:47:01 +0000 (22:47 +0100)]
remove debug stuff added by mistake...

11 months ago...
Augustin Degomme [Wed, 4 Dec 2019 21:18:23 +0000 (22:18 +0100)]
...

11 months agomanifest update
Augustin Degomme [Wed, 4 Dec 2019 21:09:25 +0000 (22:09 +0100)]
manifest update

11 months agoneed to initialize here also for osx and co.
Augustin Degomme [Wed, 4 Dec 2019 21:04:00 +0000 (22:04 +0100)]
need to initialize here also for osx and co.

11 months agoSomehow OSX "lost" aligned_alloc recently ?
Augustin Degomme [Wed, 4 Dec 2019 20:16:28 +0000 (21:16 +0100)]
Somehow OSX "lost" aligned_alloc recently ?
But it's quite useless here anyway, so don't bother.

11 months agohelp mc initialize smpi options.
Augustin Degomme [Wed, 4 Dec 2019 20:05:52 +0000 (21:05 +0100)]
help mc initialize smpi options.

11 months agofix MC build
Augustin Degomme [Wed, 4 Dec 2019 18:04:51 +0000 (19:04 +0100)]
fix MC build

11 months agoleak--
Augustin Degomme [Wed, 4 Dec 2019 17:56:51 +0000 (18:56 +0100)]
leak--

11 months agorequalify tesh as one message changed category
Augustin Degomme [Wed, 4 Dec 2019 17:56:46 +0000 (18:56 +0100)]
requalify tesh as one message changed category

11 months agoMove SMPI config to smpi_config.cpp file.
Augustin Degomme [Wed, 4 Dec 2019 17:55:45 +0000 (18:55 +0100)]
Move SMPI config to smpi_config.cpp file.
Store values for most used values, which can be used millions of times.
In some tests I saw up to 5% of the time spent reading them.

11 months agoFix link in Mutex doc
Julien EMMANUEL [Wed, 4 Dec 2019 16:26:17 +0000 (17:26 +0100)]
Fix link in Mutex doc

11 months agoMerge branch 'master' of https://framagit.org/simgrid/simgrid
Frederic Suter [Tue, 3 Dec 2019 08:52:31 +0000 (09:52 +0100)]
Merge branch 'master' of https://framagit.org/simgrid/simgrid

11 months agoFix issue with copy avoidance, which was merely working by accident in most cases.
Augustin Degomme [Mon, 2 Dec 2019 15:05:21 +0000 (16:05 +0100)]
Fix issue with copy avoidance, which was merely working by accident in most cases.
That was causing HPL to loop.

11 months agomore precise OS description for OpenIndiana.
Augustin Degomme [Thu, 28 Nov 2019 11:40:55 +0000 (12:40 +0100)]
more precise OS description for OpenIndiana.

11 months agoMerge branch 'master' of https://framagit.org/simgrid/simgrid
Frederic Suter [Mon, 2 Dec 2019 13:03:47 +0000 (14:03 +0100)]
Merge branch 'master' of https://framagit.org/simgrid/simgrid

11 months agoMerge branch 'master' into 'master'
Augustin Degomme [Mon, 2 Dec 2019 12:39:45 +0000 (13:39 +0100)]
Merge branch 'master' into 'master'

Master

See merge request simgrid/simgrid!23

11 months agoClean up and use of vector for cleaner allocation
Fabien Chaix [Mon, 2 Dec 2019 12:18:44 +0000 (14:18 +0200)]
Clean up and use of vector for cleaner allocation

11 months agomv version related things from config.h.in to version.h.in
Frederic Suter [Mon, 2 Dec 2019 09:45:12 +0000 (10:45 +0100)]
mv version related things from config.h.in to version.h.in

11 months agomove version.h from src/simgrid to include/simgrid
Frederic Suter [Mon, 2 Dec 2019 09:41:47 +0000 (10:41 +0100)]
move version.h from src/simgrid to include/simgrid

11 months agomove version related content to a dedicated file
Frederic Suter [Mon, 2 Dec 2019 09:33:02 +0000 (10:33 +0100)]
move version related content to a dedicated file

11 months agocosmetics
Frederic Suter [Mon, 2 Dec 2019 08:26:42 +0000 (09:26 +0100)]
cosmetics

11 months agooops, this bit wasn't meant to be reverted.
Augustin Degomme [Sun, 1 Dec 2019 21:22:27 +0000 (22:22 +0100)]
oops, this bit wasn't meant to be reverted.

11 months agorename this macro.
Augustin Degomme [Sun, 1 Dec 2019 17:22:40 +0000 (18:22 +0100)]
rename this macro.
It's actually useful outside of sampi, to disable malloc override when it conflicts with other codes and is not needed.
Fors instance FFTW uses FFTW(malloc(x)) to actually call fftw_malloc, and our macro was then breaking compilation.

11 months agopartial revert of e16e0233
Augustin Degomme [Sun, 1 Dec 2019 14:28:28 +0000 (15:28 +0100)]
partial revert of e16e0233
These parenthesis are useful for use in macros, such as in HPL

12 months agoAvoid allocation inside lmm_solve
Fabien Chaix [Fri, 29 Nov 2019 12:53:37 +0000 (14:53 +0200)]
Avoid allocation inside lmm_solve

12 months agoAdd missing constant definitions for Fortran
Fabien Chaix [Fri, 29 Nov 2019 12:52:35 +0000 (14:52 +0200)]
Add missing constant definitions for Fortran

12 months agoMerge branch 'master' of https://framagit.org/simgrid/simgrid
Frederic Suter [Fri, 29 Nov 2019 11:09:19 +0000 (12:09 +0100)]
Merge branch 'master' of https://framagit.org/simgrid/simgrid

12 months agomaestro_process -> maestro_
Frederic Suter [Fri, 29 Nov 2019 10:18:28 +0000 (11:18 +0100)]
maestro_process -> maestro_

12 months agomake SIMIX_wake_processes a method of simix_global
Frederic Suter [Fri, 29 Nov 2019 09:56:44 +0000 (10:56 +0100)]
make SIMIX_wake_processes a method of simix_global

12 months ago1 a.m. lazy commit. Plenty of new libs appeared on our radar on fedora after an updat...
Augustin Degomme [Fri, 29 Nov 2019 00:10:50 +0000 (01:10 +0100)]
1 a.m. lazy commit. Plenty of new libs appeared on our radar on fedora after an update (elfutils ?)...
They have multiple ro segments, and their debuginfos are missing.