java: setup a RAII wrapper to properly deal with GetStringUTFChars/ReleaseStringUTFChar

[simgrid.git] / MANIFEST.in

diff --git a/MANIFEST.in b/MANIFEST.in
index d88dde2..57b0fb5 100644 (file)
--- a/MANIFEST.in
+++ b/MANIFEST.in
@@ -188,6 +188,8 @@ include examples/cpp/comm-serialize/s4u-comm-serialize.tesh
 include examples/cpp/comm-suspend/s4u-comm-suspend.cpp
 include examples/cpp/comm-suspend/s4u-comm-suspend.tesh
 include examples/cpp/comm-suspend/s4u-comm-suspend_d.xml
+include examples/cpp/comm-throttling/s4u-comm-throttling.cpp
+include examples/cpp/comm-throttling/s4u-comm-throttling.tesh
 include examples/cpp/comm-wait/s4u-comm-wait.cpp
 include examples/cpp/comm-wait/s4u-comm-wait.tesh
 include examples/cpp/comm-wait/s4u-comm-wait_d.xml
@@ -200,6 +202,18 @@ include examples/cpp/comm-waitany/s4u-comm-waitany_d.xml
 include examples/cpp/comm-waituntil/s4u-comm-waituntil.cpp
 include examples/cpp/comm-waituntil/s4u-comm-waituntil.tesh
 include examples/cpp/comm-waituntil/s4u-comm-waituntil_d.xml
+include examples/cpp/dag-comm/s4u-dag-comm.cpp
+include examples/cpp/dag-comm/s4u-dag-comm.tesh
+include examples/cpp/dag-failure/s4u-dag-failure.cpp
+include examples/cpp/dag-failure/s4u-dag-failure.tesh
+include examples/cpp/dag-from-dot/dag.dot
+include examples/cpp/dag-from-dot/dag_with_cycle.dot
+include examples/cpp/dag-from-dot/s4u-dag-from-dot.cpp
+include examples/cpp/dag-from-dot/s4u-dag-from-dot.tesh
+include examples/cpp/dag-io/s4u-dag-io.cpp
+include examples/cpp/dag-io/s4u-dag-io.tesh
+include examples/cpp/dag-simple/s4u-dag-simple.cpp
+include examples/cpp/dag-simple/s4u-dag-simple.tesh
 include examples/cpp/dht-chord/s4u-dht-chord-node.cpp
 include examples/cpp/dht-chord/s4u-dht-chord.cpp
 include examples/cpp/dht-chord/s4u-dht-chord.hpp
@@ -232,6 +246,8 @@ include examples/cpp/energy-wifi/s4u-energy-wifi.cpp
 include examples/cpp/energy-wifi/s4u-energy-wifi.tesh
 include examples/cpp/engine-filtering/s4u-engine-filtering.cpp
 include examples/cpp/engine-filtering/s4u-engine-filtering.tesh
+include examples/cpp/engine-run-partial/s4u-engine-run-partial.cpp
+include examples/cpp/engine-run-partial/s4u-engine-run-partial.tesh
 include examples/cpp/exec-async/s4u-exec-async.cpp
 include examples/cpp/exec-async/s4u-exec-async.tesh
 include examples/cpp/exec-basic/s4u-exec-basic.cpp
@@ -260,8 +276,6 @@ include examples/cpp/exec-waitfor/s4u-exec-waitfor.cpp
 include examples/cpp/exec-waitfor/s4u-exec-waitfor.tesh
 include examples/cpp/io-async/s4u-io-async.cpp
 include examples/cpp/io-async/s4u-io-async.tesh
-include examples/cpp/io-basic/s4u-io-basic.cpp
-include examples/cpp/io-basic/s4u-io-basic.tesh
 include examples/cpp/io-degradation/s4u-io-degradation.cpp
 include examples/cpp/io-degradation/s4u-io-degradation.tesh
 include examples/cpp/io-dependent/s4u-io-dependent.cpp
@@ -273,6 +287,8 @@ include examples/cpp/io-file-remote/s4u-io-file-remote.tesh
 include examples/cpp/io-file-remote/s4u-io-file-remote_d.xml
 include examples/cpp/io-file-system/s4u-io-file-system.cpp
 include examples/cpp/io-file-system/s4u-io-file-system.tesh
+include examples/cpp/io-priority/s4u-io-priority.cpp
+include examples/cpp/io-priority/s4u-io-priority.tesh
 include examples/cpp/maestro-set/s4u-maestro-set.cpp
 include examples/cpp/maestro-set/s4u-maestro-set.tesh
 include examples/cpp/mc-bugged1-liveness/promela_bugged1_liveness
@@ -476,33 +492,14 @@ include examples/deprecated/msg/mc/centralized_mutex.tesh
 include examples/deprecated/msg/mc/deploy_bugged2_liveness.xml
 include examples/deprecated/msg/mc/deploy_centralized_mutex.xml
 include examples/deprecated/msg/mc/promela_bugged2_liveness
-include examples/deprecated/simdag/dag-dotload/dag.dot
-include examples/deprecated/simdag/dag-dotload/dag_with_cycle.dot
-include examples/deprecated/simdag/dag-dotload/sd_dag-dotload.c
-include examples/deprecated/simdag/dag-dotload/sd_dag-dotload.tesh
 include examples/deprecated/simdag/daxload/sd_daxload.c
 include examples/deprecated/simdag/daxload/sd_daxload.tesh
 include examples/deprecated/simdag/daxload/simple_dax_with_cycle.xml
 include examples/deprecated/simdag/daxload/smalldax.xml
-include examples/deprecated/simdag/fail/sd_fail.c
-include examples/deprecated/simdag/fail/sd_fail.tesh
-include examples/deprecated/simdag/ptg-dotload/ptg.dot
-include examples/deprecated/simdag/ptg-dotload/sd_ptg-dotload.c
-include examples/deprecated/simdag/ptg-dotload/sd_ptg-dotload.tesh
-include examples/deprecated/simdag/schedule-dotload/dag_with_bad_schedule.dot
-include examples/deprecated/simdag/schedule-dotload/dag_with_good_schedule.dot
-include examples/deprecated/simdag/schedule-dotload/sd_schedule-dotload.c
-include examples/deprecated/simdag/schedule-dotload/sd_schedule-dotload.tesh
 include examples/deprecated/simdag/scheduling/Montage_25.xml
 include examples/deprecated/simdag/scheduling/expected_output.jed
 include examples/deprecated/simdag/scheduling/sd_scheduling.c
 include examples/deprecated/simdag/scheduling/sd_scheduling.tesh
-include examples/deprecated/simdag/test/sd_test.cpp
-include examples/deprecated/simdag/test/sd_test.tesh
-include examples/deprecated/simdag/throttling/sd_throttling.c
-include examples/deprecated/simdag/throttling/sd_throttling.tesh
-include examples/deprecated/simdag/typed_tasks/sd_typed_tasks.c
-include examples/deprecated/simdag/typed_tasks/sd_typed_tasks.tesh
 include examples/python/actor-create/actor-create.py
 include examples/python/actor-create/actor-create.tesh
 include examples/python/actor-daemon/actor-daemon.py
@@ -551,6 +548,9 @@ include examples/smpi/NAS/nas_common.c
 include examples/smpi/NAS/nas_common.h
 include examples/smpi/ampi_test/ampi_test.cpp
 include examples/smpi/ampi_test/ampi_test.tesh
+include examples/smpi/comm_dynamic_costs/comm-dynamic-cost.cpp
+include examples/smpi/comm_dynamic_costs/comm-dynamic-cost.tesh
+include examples/smpi/comm_dynamic_costs/hostfile
 include examples/smpi/energy/energy.c
 include examples/smpi/energy/energy.tesh
 include examples/smpi/energy/hostfile
@@ -749,6 +749,10 @@ include teshsuite/s4u/comm-get-sender/comm-get-sender.tesh
 include teshsuite/s4u/comm-pt2pt/comm-pt2pt.cpp
 include teshsuite/s4u/concurrent_rw/concurrent_rw.cpp
 include teshsuite/s4u/concurrent_rw/concurrent_rw.tesh
+include teshsuite/s4u/dag-incomplete-simulation/dag-incomplete-simulation.cpp
+include teshsuite/s4u/dag-incomplete-simulation/dag-incomplete-simulation.tesh
+include teshsuite/s4u/dependencies/dependencies.cpp
+include teshsuite/s4u/dependencies/dependencies.tesh
 include teshsuite/s4u/evaluate-get-route-time/evaluate-get-route-time.cpp
 include teshsuite/s4u/evaluate-parse-time/evaluate-parse-time.cpp
 include teshsuite/s4u/host-multicore-speed-file/host-multicore-speed-file.cpp
@@ -801,14 +805,10 @@ include teshsuite/s4u/wait-all-for/wait-all-for.cpp
 include teshsuite/s4u/wait-all-for/wait-all-for.tesh
 include teshsuite/s4u/wait-any-for/wait-any-for.cpp
 include teshsuite/s4u/wait-any-for/wait-any-for.tesh
-include teshsuite/simdag/availability/availability.c
-include teshsuite/simdag/availability/availability.tesh
 include teshsuite/simdag/flatifier/bogus_missing_gateway.tesh
 include teshsuite/simdag/flatifier/bogus_two_hosts_asymetric.tesh
 include teshsuite/simdag/flatifier/flatifier.cpp
 include teshsuite/simdag/flatifier/flatifier.tesh
-include teshsuite/simdag/incomplete/incomplete.c
-include teshsuite/simdag/incomplete/incomplete.tesh
 include teshsuite/simdag/platforms/Dijkstra.xml
 include teshsuite/simdag/platforms/bob.trace
 include teshsuite/simdag/platforms/bogus_missing_dst_gateway.xml
@@ -1808,13 +1808,10 @@ include doc/doxygen/inside_extending.doc
 include doc/doxygen/inside_release.doc
 include doc/doxygen/inside_tests.doc
 include doc/doxygen/module-index.doc
-include doc/doxygen/module-sd.doc
 include doc/doxygen/module-surf.doc
-include doc/doxygen/module-trace.doc
 include doc/doxygen/outcomes_vizu.doc
 include doc/doxygen/platform.doc
 include doc/doxygen/uhood.doc
-include doc/doxygen/uhood_arch.doc
 include doc/doxygen/uhood_switch.doc
 include docs/Build.sh
 include docs/README.md
@@ -1828,6 +1825,7 @@ include docs/manpages/smpiff.1
 include docs/manpages/smpirun.1
 include docs/manpages/tesh.pod
 include docs/requirements.txt
+include docs/source/Calibrating_the_models.rst
 include docs/source/Configuring_SimGrid.rst
 include docs/source/Deploying_your_application.rst
 include docs/source/Design_goals.rst
@@ -1835,12 +1833,12 @@ include docs/source/Doxyfile
 include docs/source/Experimental_setup.rst
 include docs/source/Installing_SimGrid.rst
 include docs/source/Introduction.rst
+include docs/source/Modeling_howtos.rst
 include docs/source/Models.rst
 include docs/source/Outcomes.rst
 include docs/source/Platform.rst
 include docs/source/Platform_cpp.rst
 include docs/source/Platform_examples.rst
-include docs/source/Platform_howtos.rst
 include docs/source/Platform_routing.rst
 include docs/source/Plugins.rst
 include docs/source/Release_Notes.rst
@@ -1883,6 +1881,7 @@ include docs/source/img/smpi_simgrid_alltoall_pair_16.png
 include docs/source/img/smpi_simgrid_alltoall_ring_16.png
 include docs/source/img/starzone.drawio
 include docs/source/img/starzone.svg
+include docs/source/img/vivaldi.svg
 include docs/source/img/zone_hierarchy.png
 include docs/source/img/zone_tree.drawio
 include docs/source/img/zone_tree.svg
@@ -1902,6 +1901,35 @@ include docs/source/tuto_disk/fig/griffon_write_dhist.png
 include docs/source/tuto_disk/fig/simgrid_results.png
 include docs/source/tuto_disk/init.el
 include docs/source/tuto_disk/tuto_disk.cpp
+include docs/source/tuto_network_calibration/CMakeLists.txt
+include docs/source/tuto_network_calibration/Dockerfile
+include docs/source/tuto_network_calibration/Utils.cpp
+include docs/source/tuto_network_calibration/Utils.hpp
+include docs/source/tuto_network_calibration/clustering_ckmeans.ipynb
+include docs/source/tuto_network_calibration/clustering_dhist.ipynb
+include docs/source/tuto_network_calibration/dahu_platform_ckmeans.cpp
+include docs/source/tuto_network_calibration/dahu_platform_dhist.cpp
+include docs/source/tuto_network_calibration/fig/pingpong_real.drawio
+include docs/source/tuto_network_calibration/fig/pingpong_real.png
+include docs/source/tuto_network_calibration/fig/pingpong_simgrid.drawio
+include docs/source/tuto_network_calibration/fig/pingpong_simgrid.png
+include docs/source/tuto_network_calibration/isend_ckmeans.json
+include docs/source/tuto_network_calibration/isend_dhist.json
+include docs/source/tuto_network_calibration/network_calibration_tutorial.ipynb
+include docs/source/tuto_network_calibration/network_calibration_tutorial.rst
+include docs/source/tuto_network_calibration/pingpong_ckmeans.json
+include docs/source/tuto_network_calibration/pingpong_dhist.json
+include docs/source/tuto_network_calibration/plot_ckmeans_PingPong.png
+include docs/source/tuto_network_calibration/plot_dhist_PingPong.png
+include docs/source/tuto_network_calibration/plot_op_average.png
+include docs/source/tuto_network_calibration/plot_op_raw.png
+include docs/source/tuto_network_calibration/plot_op_segmented.png
+include docs/source/tuto_network_calibration/plot_op_simgrid_ckmeans.png
+include docs/source/tuto_network_calibration/plot_op_simgrid_dhist.png
+include docs/source/tuto_network_calibration/recv_ckmeans.json
+include docs/source/tuto_network_calibration/recv_dhist.json
+include docs/source/tuto_network_calibration/send_ckmeans.json
+include docs/source/tuto_network_calibration/send_dhist.json
 include docs/source/tuto_s4u/deployment1.xml
 include docs/source/tuto_s4u/deployment2.xml
 include docs/source/tuto_s4u/deployment3.xml
@@ -1933,7 +1961,9 @@ include examples/platforms/bypassRoute.xml
 include examples/platforms/bypassZoneRoute.xml
 include examples/platforms/cloud.xml
 include examples/platforms/cluster_and_one_host.xml
+include examples/platforms/cluster_backbone.svg
 include examples/platforms/cluster_backbone.xml
+include examples/platforms/cluster_crossbar.svg
 include examples/platforms/cluster_crossbar.xml
 include examples/platforms/cluster_dragonfly.svg
 include examples/platforms/cluster_dragonfly.xml
@@ -1963,7 +1993,6 @@ include examples/platforms/onelink.xml
 include examples/platforms/optorsim/gridpp_grid_2004.conf
 include examples/platforms/optorsim/lcg_sept2004_grid.conf
 include examples/platforms/optorsim/transform_optorsim_platform.pl
-include examples/platforms/profiles/bourassa_state.profile
 include examples/platforms/profiles/fafard_state.profile
 include examples/platforms/profiles/faulty_host.profile
 include examples/platforms/profiles/ginette_state.profile
@@ -2015,6 +2044,7 @@ include examples/python/comm-waitall/comm-waitall_d.xml
 include examples/python/comm-waitany/comm-waitany_d.xml
 include examples/smpi/CMakeLists.txt
 include examples/smpi/NAS/CMakeLists.txt
+include examples/smpi/comm_dynamic_costs/CMakeLists.txt
 include examples/smpi/mc/only_send_deterministic.tesh
 include examples/smpi/replay_multiple/CMakeLists.txt
 include examples/smpi/replay_multiple_manual_deploy/CMakeLists.txt
@@ -2067,6 +2097,7 @@ include include/simgrid/plugins/energy.h
 include include/simgrid/plugins/file_system.h
 include include/simgrid/plugins/live_migration.h
 include include/simgrid/plugins/load.h
+include include/simgrid/plugins/ns3.hpp
 include include/simgrid/s4u.hpp
 include include/simgrid/s4u/Activity.hpp
 include include/simgrid/s4u/Actor.hpp
@@ -2193,7 +2224,6 @@ include src/include/catch.hpp
 include src/include/mc/datatypes.h
 include src/include/mc/mc.h
 include src/include/simgrid/sg_config.hpp
-include src/include/surf/surf.hpp
 include src/include/xbt/coverage.h
 include src/include/xbt/mmalloc.h
 include src/include/xbt/parmap.hpp
@@ -2263,11 +2293,15 @@ include src/kernel/lmm/maxmin.cpp
 include src/kernel/lmm/maxmin.hpp
 include src/kernel/lmm/maxmin_test.cpp
 include src/kernel/resource/Action.cpp
+include src/kernel/resource/CpuImpl.cpp
+include src/kernel/resource/CpuImpl.hpp
 include src/kernel/resource/DiskImpl.cpp
 include src/kernel/resource/DiskImpl.hpp
 include src/kernel/resource/Model.cpp
 include src/kernel/resource/NetworkModelIntf_test.cpp
 include src/kernel/resource/Resource.hpp
+include src/kernel/resource/VirtualMachineImpl.cpp
+include src/kernel/resource/VirtualMachineImpl.hpp
 include src/kernel/resource/profile/DatedValue.cpp
 include src/kernel/resource/profile/DatedValue.hpp
 include src/kernel/resource/profile/Event.hpp
@@ -2392,7 +2426,6 @@ include src/msg/msg_private.hpp
 include src/msg/msg_process.cpp
 include src/msg/msg_task.cpp
 include src/plugins/ProducerConsumer.cpp
-include src/plugins/dirty_page_tracking.cpp
 include src/plugins/file_system/s4u_FileSystem.cpp
 include src/plugins/host_dvfs.cpp
 include src/plugins/host_energy.cpp
@@ -2400,13 +2433,9 @@ include src/plugins/host_load.cpp
 include src/plugins/link_energy.cpp
 include src/plugins/link_energy_wifi.cpp
 include src/plugins/link_load.cpp
-include src/plugins/vm/VirtualMachineImpl.cpp
-include src/plugins/vm/VirtualMachineImpl.hpp
-include src/plugins/vm/VmHostExt.cpp
-include src/plugins/vm/VmHostExt.hpp
 include src/plugins/vm/VmLiveMigration.cpp
 include src/plugins/vm/VmLiveMigration.hpp
-include src/plugins/vm/s4u_VirtualMachine.cpp
+include src/plugins/vm/dirty_page_tracking.cpp
 include src/s4u/s4u_Activity.cpp
 include src/s4u/s4u_Actor.cpp
 include src/s4u/s4u_Barrier.cpp
@@ -2422,6 +2451,7 @@ include src/s4u/s4u_Mailbox.cpp
 include src/s4u/s4u_Mutex.cpp
 include src/s4u/s4u_Netzone.cpp
 include src/s4u/s4u_Semaphore.cpp
+include src/s4u/s4u_VirtualMachine.cpp
 include src/simdag/dax.dtd
 include src/simdag/dax_dtd.c
 include src/simdag/dax_dtd.h
@@ -2640,8 +2670,6 @@ include src/surf/SplitDuplexLinkImpl.hpp
 include src/surf/SplitDuplexLinkImpl_test.cpp
 include src/surf/cpu_cas01.cpp
 include src/surf/cpu_cas01.hpp
-include src/surf/cpu_interface.cpp
-include src/surf/cpu_interface.hpp
 include src/surf/cpu_ti.cpp
 include src/surf/cpu_ti.hpp
 include src/surf/disk_s19.cpp
@@ -2667,10 +2695,8 @@ include src/surf/ns3/ns3_simulator.hpp
 include src/surf/ptask_L07.cpp
 include src/surf/ptask_L07.hpp
 include src/surf/sg_platf.cpp
-include src/surf/surf_c_bindings.cpp
 include src/surf/surf_interface.cpp
 include src/surf/surf_interface.hpp
-include src/surf/surf_private.hpp
 include src/surf/xml/platf.hpp
 include src/surf/xml/platf_private.hpp
 include src/surf/xml/simgrid.dtd