--- /dev/null
+#include "colls.h"
+#ifndef REDUCE_STUFF
+#define REDUCE_STUFF
+/*****************************************************************************
+
+Copyright (c) 2006, Ahmad Faraj & Xin Yuan,
+All rights reserved.
+
+Redistribution and use in source and binary forms, with or without
+modification, are permitted provided that the following conditions are met:
+
+ * Redistributions of source code must retain the above copyright notice,
+ this list of conditions and the following disclaimer.
+
+ * Redistributions in binary form must reproduce the above copyright notice,
+ this list of conditions and the following disclaimer in the documentation
+ and/or other materials provided with the distribution.
+
+ * Neither the name of the Florida State University nor the names of its
+ contributors may be used to endorse or promote products derived from this
+ software without specific prior written permission.
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
+ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
+WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR
+ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
+(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
+LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON
+ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
+(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
+SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
+ *************************************************************************
+ * Any results obtained from executing this software require the *
+ * acknowledgment and citation of the software and its owners. *
+ * The full citation is given below: *
+ * *
+ * A. Faraj and X. Yuan. "Automatic Generation and Tuning of MPI *
+ * Collective Communication Routines." The 19th ACM International *
+ * Conference on Supercomputing (ICS), Cambridge, Massachusetts, *
+ * June 20-22, 2005. *
+ *************************************************************************
+
+*****************************************************************************/
+
+extern MPI_User_function *MPIR_Op_table[];
+
+
+/* -*- Mode: C; c-basic-offset:4 ; -*- */
+/* $Id: mpich-stuff.h,v 1.1 2005/08/22 19:50:21 faraj Exp $
+ *
+ * (C) 2001 by Argonne National Laboratory.
+ * See COPYRIGHT in top-level directory.
+ */
+#ifndef _MPICH_STUFF_H
+#define _MPICH_STUFF_H
+
+/*TOpaqOverview.tex
+ MPI Opaque Objects:
+
+ MPI Opaque objects such as 'MPI_Comm' or 'MPI_Datatype' are specified by
+ integers (in the MPICH2 implementation); the MPI standard calls these
+ handles.
+ Out of range values are invalid; the value 0 is reserved.
+ For most (with the possible exception of
+ 'MPI_Request' for performance reasons) MPI Opaque objects, the integer
+ encodes both the kind of object (allowing runtime tests to detect a datatype
+ passed where a communicator is expected) and important properties of the
+ object. Even the 'MPI_xxx_NULL' values should be encoded so that
+ different null handles can be distinguished. The details of the encoding
+ of the handles is covered in more detail in the MPICH2 Design Document.
+ For the most part, the ADI uses pointers to the underlying structures
+ rather than the handles themselves. However, each structure contains an
+ 'handle' field that is the corresponding integer handle for the MPI object.
+
+ MPID objects (objects used within the implementation of MPI) are not opaque.
+
+ T*/
+
+/* Known MPI object types. These are used for both the error handlers
+ and for the handles. This is a 4 bit value. 0 is reserved for so
+ that all-zero handles can be flagged as an error. */
+/*E
+ MPID_Object_kind - Object kind (communicator, window, or file)
+
+ Notes:
+ This enum is used by keyvals and errhandlers to indicate the type of
+ object for which MPI opaque types the data is valid. These are defined
+ as bits to allow future expansion to the case where an object is value for
+ multiple types (for example, we may want a universal error handler for
+ errors return). This is also used to indicate the type of MPI object a
+ MPI handle represents. It is an enum because only this applies only the
+ the MPI objects.
+
+ Module:
+ Attribute-DS
+ E*/
+typedef enum MPID_Object_kind {
+ MPID_COMM = 0x1,
+ MPID_GROUP = 0x2,
+ MPID_DATATYPE = 0x3,
+ MPID_FILE = 0x4,
+ MPID_ERRHANDLER = 0x5,
+ MPID_OP = 0x6,
+ MPID_INFO = 0x7,
+ MPID_WIN = 0x8,
+ MPID_KEYVAL = 0x9,
+ MPID_ATTR = 0xa,
+ MPID_REQUEST = 0xb
+} MPID_Object_kind;
+/* The above objects should correspond to MPI objects only. */
+#define HANDLE_MPI_KIND_SHIFT 26
+#define HANDLE_GET_MPI_KIND(a) ( ((a)&0x3c000000) >> HANDLE_MPI_KIND_SHIFT )
+
+/* Handle types. These are really 2 bits */
+#define HANDLE_KIND_INVALID 0x0
+#define HANDLE_KIND_BUILTIN 0x1
+#define HANDLE_KIND_DIRECT 0x2
+#define HANDLE_KIND_INDIRECT 0x3
+/* Mask assumes that ints are at least 4 bytes */
+#define HANDLE_KIND_MASK 0xc0000000
+#define HANDLE_KIND_SHIFT 30
+#define HANDLE_GET_KIND(a) (((a)&HANDLE_KIND_MASK)>>HANDLE_KIND_SHIFT)
+#define HANDLE_SET_KIND(a,kind) ((a)|((kind)<<HANDLE_KIND_SHIFT))
+
+/* For indirect, the remainder of the handle has a block and index */
+#define HANDLE_INDIRECT_SHIFT 16
+#define HANDLE_BLOCK(a) (((a)& 0x03FF0000) >> HANDLE_INDIRECT_SHIFT)
+#define HANDLE_BLOCK_INDEX(a) ((a) & 0x0000FFFF)
+
+/* Handle block is between 1 and 1024 *elements* */
+#define HANDLE_BLOCK_SIZE 256
+/* Index size is bewtween 1 and 65536 *elements* */
+#define HANDLE_BLOCK_INDEX_SIZE 1024
+
+/* For direct, the remainder of the handle is the index into a predefined
+ block */
+#define HANDLE_MASK 0x03FFFFFF
+#define HANDLE_INDEX(a) ((a)& HANDLE_MASK)
+
+/* ALL objects have the handle as the first value. */
+/* Inactive (unused and stored on the appropriate avail list) objects
+ have MPIU_Handle_common as the head */
+typedef struct MPIU_Handle_common {
+ int handle;
+ volatile int ref_count; /* This field is used to indicate that the
+ object is not in use (see, e.g.,
+ MPID_Comm_valid_ptr) */
+ void *next; /* Free handles use this field to point to the next
+ free object */
+} MPIU_Handle_common;
+
+/* All *active* (in use) objects have the handle as the first value; objects
+ with referene counts have the reference count as the second value.
+ See MPIU_Object_add_ref and MPIU_Object_release_ref. */
+typedef struct MPIU_Handle_head {
+ int handle;
+ volatile int ref_count;
+} MPIU_Handle_head;
+
+/* This type contains all of the data, except for the direct array,
+ used by the object allocators. */
+typedef struct MPIU_Object_alloc_t {
+ MPIU_Handle_common *avail; /* Next available object */
+ int initialized; /* */
+ void *(*indirect)[]; /* Pointer to indirect object blocks */
+ int indirect_size; /* Number of allocated indirect blocks */
+ MPID_Object_kind kind; /* Kind of object this is for */
+ int size; /* Size of an individual object */
+ void *direct; /* Pointer to direct block, used
+ for allocation */
+ int direct_size; /* Size of direct block */
+} MPIU_Object_alloc_t;
+extern void *MPIU_Handle_obj_alloc(MPIU_Object_alloc_t *);
+extern void MPIU_Handle_obj_alloc_start(MPIU_Object_alloc_t *);
+extern void MPIU_Handle_obj_alloc_complete(MPIU_Object_alloc_t *, int init);
+extern void MPIU_Handle_obj_free(MPIU_Object_alloc_t *, void *);
+void *MPIU_Handle_get_ptr_indirect(int, MPIU_Object_alloc_t *);
+extern void *MPIU_Handle_direct_init(void *direct, int direct_size,
+ int obj_size, int handle_type);
+#endif
+#define MPID_Getb_ptr(kind,a,bmsk,ptr) \
+{ \
+ switch (HANDLE_GET_KIND(a)) { \
+ case HANDLE_KIND_BUILTIN: \
+ ptr=MPID_##kind##_builtin+((a)&(bmsk)); \
+ break; \
+ case HANDLE_KIND_DIRECT: \
+ ptr=MPID_##kind##_direct+HANDLE_INDEX(a); \
+ break; \
+ case HANDLE_KIND_INDIRECT: \
+ ptr=((MPID_##kind*) \
+ MPIU_Handle_get_ptr_indirect(a,&MPID_##kind##_mem)); \
+ break; \
+ case HANDLE_KIND_INVALID: \
+ default: \
+ ptr=0; \
+ break; \
+ } \
+}
+
+
+
+#define MPID_Op_get_ptr(a,ptr) MPID_Getb_ptr(Op,a,0x000000ff,ptr)
+typedef enum MPID_Lang_t { MPID_LANG_C
+#ifdef HAVE_FORTRAN_BINDING
+ , MPID_LANG_FORTRAN, MPID_LANG_FORTRAN90
+#endif
+#ifdef HAVE_CXX_BINDING
+ , MPID_LANG_CXX
+#endif
+} MPID_Lang_t;
+/* Reduction and accumulate operations */
+/*E
+ MPID_Op_kind - Enumerates types of MPI_Op types
+
+ Notes:
+ These are needed for implementing 'MPI_Accumulate', since only predefined
+ operations are allowed for that operation.
+
+ A gap in the enum values was made allow additional predefined operations
+ to be inserted. This might include future additions to MPI or experimental
+ extensions (such as a Read-Modify-Write operation).
+
+ Module:
+ Collective-DS
+ E*/
+typedef enum MPID_Op_kind { MPID_OP_MAX = 1, MPID_OP_MIN = 2,
+ MPID_OP_SUM = 3, MPID_OP_PROD = 4,
+ MPID_OP_LAND = 5, MPID_OP_BAND = 6, MPID_OP_LOR = 7, MPID_OP_BOR = 8,
+ MPID_OP_LXOR = 9, MPID_OP_BXOR = 10, MPID_OP_MAXLOC = 11,
+ MPID_OP_MINLOC = 12, MPID_OP_REPLACE = 13,
+ MPID_OP_USER_NONCOMMUTE = 32, MPID_OP_USER = 33
+} MPID_Op_kind;
+
+/*S
+ MPID_User_function - Definition of a user function for MPI_Op types.
+
+ Notes:
+ This includes a 'const' to make clear which is the 'in' argument and
+ which the 'inout' argument, and to indicate that the 'count' and 'datatype'
+ arguments are unchanged (they are addresses in an attempt to allow
+ interoperation with Fortran). It includes 'restrict' to emphasize that
+ no overlapping operations are allowed.
+
+ We need to include a Fortran version, since those arguments will
+ have type 'MPI_Fint *' instead. We also need to add a test to the
+ test suite for this case; in fact, we need tests for each of the handle
+ types to ensure that the transfered handle works correctly.
+
+ This is part of the collective module because user-defined operations
+ are valid only for the collective computation routines and not for
+ RMA accumulate.
+
+ Yes, the 'restrict' is in the correct location. C compilers that
+ support 'restrict' should be able to generate code that is as good as a
+ Fortran compiler would for these functions.
+
+ We should note on the manual pages for user-defined operations that
+ 'restrict' should be used when available, and that a cast may be
+ required when passing such a function to 'MPI_Op_create'.
+
+ Question:
+ Should each of these function types have an associated typedef?
+
+ Should there be a C++ function here?
+
+ Module:
+ Collective-DS
+ S*/
+typedef union MPID_User_function {
+ void (*c_function) (const void *, void *, const int *, const MPI_Datatype *);
+ void (*f77_function) (const void *, void *,
+ const MPI_Fint *, const MPI_Fint *);
+} MPID_User_function;
+/* FIXME: Should there be "restrict" in the definitions above, e.g.,
+ (*c_function)( const void restrict * , void restrict *, ... )? */
+
+/*S
+ MPID_Op - MPI_Op structure
+
+ Notes:
+ All of the predefined functions are commutative. Only user functions may
+ be noncummutative, so there are two separate op types for commutative and
+ non-commutative user-defined operations.
+
+ Operations do not require reference counts because there are no nonblocking
+ operations that accept user-defined operations. Thus, there is no way that
+ a valid program can free an 'MPI_Op' while it is in use.
+
+ Module:
+ Collective-DS
+ S*/
+typedef struct MPID_Op {
+ int handle; /* value of MPI_Op for this structure */
+ volatile int ref_count;
+ MPID_Op_kind kind;
+ MPID_Lang_t language;
+ MPID_User_function function;
+} MPID_Op;
+#define MPID_OP_N_BUILTIN 14
+extern MPID_Op MPID_Op_builtin[MPID_OP_N_BUILTIN];
+extern MPID_Op MPID_Op_direct[];
+extern MPIU_Object_alloc_t MPID_Op_mem;
+
+/*****************************************************************************
+
+* Function: get_op_func
+
+* return: Pointer to MPI_User_function
+
+* inputs:
+ op: operator (max, min, etc)
+
+ * Descrp: Function returns the function associated with current operator
+ * op.
+
+ * Auther: AHMAD FARAJ
+
+****************************************************************************/
+MPI_User_function *get_op_func(MPI_Op op)
+{
+
+ if (HANDLE_GET_KIND(op) == HANDLE_KIND_BUILTIN)
+ return MPIR_Op_table[op % 16 - 1];
+ return NULL;
+}
+
+#endif
+
+
+int smpi_coll_tuned_allreduce_rab_reduce_scatter(void *sbuff, void *rbuff,
+ int count, MPI_Datatype dtype,
+ MPI_Op op, MPI_Comm comm)
+{
+ int nprocs, rank, type_size, tag = 543;
+ int mask, dst, pof2, newrank, rem, newdst, i,
+ send_idx, recv_idx, last_idx, send_cnt, recv_cnt, *cnts, *disps;
+ MPI_Aint lb, extent;
+ MPI_Status status;
+ void *tmp_buf = NULL;
+ MPI_User_function *func = get_op_func(op);
+ MPI_Comm_size(comm, &nprocs);
+ MPI_Comm_rank(comm, &rank);
+
+ MPI_Type_extent(dtype, &extent);
+ tmp_buf = (void *) malloc(count * extent);
+ if (!tmp_buf) {
+ printf("Could not allocate memory for tmp_buf\n");
+ return 1;
+ }
+
+ MPIR_Localcopy(sbuff, count, dtype, rbuff, count, dtype);
+
+ MPI_Type_size(dtype, &type_size);
+
+ // find nearest power-of-two less than or equal to comm_size
+ pof2 = 1;
+ while (pof2 <= nprocs)
+ pof2 <<= 1;
+ pof2 >>= 1;
+
+ rem = nprocs - pof2;
+
+ // In the non-power-of-two case, all even-numbered
+ // processes of rank < 2*rem send their data to
+ // (rank+1). These even-numbered processes no longer
+ // participate in the algorithm until the very end. The
+ // remaining processes form a nice power-of-two.
+
+ if (rank < 2 * rem) {
+ // even
+ if (rank % 2 == 0) {
+
+ MPIC_Send(rbuff, count, dtype, rank + 1, tag, comm);
+
+ // temporarily set the rank to -1 so that this
+ // process does not pariticipate in recursive
+ // doubling
+ newrank = -1;
+ } else // odd
+ {
+ MPIC_Recv(tmp_buf, count, dtype, rank - 1, tag, comm, &status);
+ // do the reduction on received data. since the
+ // ordering is right, it doesn't matter whether
+ // the operation is commutative or not.
+ (*func) (tmp_buf, rbuff, &count, &dtype);
+
+ // change the rank
+ newrank = rank / 2;
+ }
+ }
+
+ else // rank >= 2 * rem
+ newrank = rank - rem;
+
+ // If op is user-defined or count is less than pof2, use
+ // recursive doubling algorithm. Otherwise do a reduce-scatter
+ // followed by allgather. (If op is user-defined,
+ // derived datatypes are allowed and the user could pass basic
+ // datatypes on one process and derived on another as long as
+ // the type maps are the same. Breaking up derived
+ // datatypes to do the reduce-scatter is tricky, therefore
+ // using recursive doubling in that case.)
+
+ if (newrank != -1) {
+ // do a reduce-scatter followed by allgather. for the
+ // reduce-scatter, calculate the count that each process receives
+ // and the displacement within the buffer
+
+ cnts = (int *) malloc(pof2 * sizeof(int));
+ disps = (int *) malloc(pof2 * sizeof(int));
+
+ for (i = 0; i < (pof2 - 1); i++)
+ cnts[i] = count / pof2;
+ cnts[pof2 - 1] = count - (count / pof2) * (pof2 - 1);
+
+ disps[0] = 0;
+ for (i = 1; i < pof2; i++)
+ disps[i] = disps[i - 1] + cnts[i - 1];
+
+ mask = 0x1;
+ send_idx = recv_idx = 0;
+ last_idx = pof2;
+ while (mask < pof2) {
+ newdst = newrank ^ mask;
+ // find real rank of dest
+ dst = (newdst < rem) ? newdst * 2 + 1 : newdst + rem;
+
+ send_cnt = recv_cnt = 0;
+ if (newrank < newdst) {
+ send_idx = recv_idx + pof2 / (mask * 2);
+ for (i = send_idx; i < last_idx; i++)
+ send_cnt += cnts[i];
+ for (i = recv_idx; i < send_idx; i++)
+ recv_cnt += cnts[i];
+ } else {
+ recv_idx = send_idx + pof2 / (mask * 2);
+ for (i = send_idx; i < recv_idx; i++)
+ send_cnt += cnts[i];
+ for (i = recv_idx; i < last_idx; i++)
+ recv_cnt += cnts[i];
+ }
+
+ // Send data from recvbuf. Recv into tmp_buf
+ MPIC_Sendrecv((char *) rbuff + disps[send_idx] * extent, send_cnt,
+ dtype, dst, tag,
+ (char *) tmp_buf + disps[recv_idx] * extent, recv_cnt,
+ dtype, dst, tag, comm, &status);
+
+ // tmp_buf contains data received in this step.
+ // recvbuf contains data accumulated so far
+
+ // This algorithm is used only for predefined ops
+ // and predefined ops are always commutative.
+ (*func) ((char *) tmp_buf + disps[recv_idx] * extent,
+ (char *) rbuff + disps[recv_idx] * extent, &recv_cnt, &dtype);
+
+ // update send_idx for next iteration
+ send_idx = recv_idx;
+ mask <<= 1;
+
+ // update last_idx, but not in last iteration because the value
+ // is needed in the allgather step below.
+ if (mask < pof2)
+ last_idx = recv_idx + pof2 / mask;
+ }
+
+ // now do the allgather
+
+ mask >>= 1;
+ while (mask > 0) {
+ newdst = newrank ^ mask;
+ // find real rank of dest
+ dst = (newdst < rem) ? newdst * 2 + 1 : newdst + rem;
+
+ send_cnt = recv_cnt = 0;
+ if (newrank < newdst) {
+ // update last_idx except on first iteration
+ if (mask != pof2 / 2)
+ last_idx = last_idx + pof2 / (mask * 2);
+
+ recv_idx = send_idx + pof2 / (mask * 2);
+ for (i = send_idx; i < recv_idx; i++)
+ send_cnt += cnts[i];
+ for (i = recv_idx; i < last_idx; i++)
+ recv_cnt += cnts[i];
+ } else {
+ recv_idx = send_idx - pof2 / (mask * 2);
+ for (i = send_idx; i < last_idx; i++)
+ send_cnt += cnts[i];
+ for (i = recv_idx; i < send_idx; i++)
+ recv_cnt += cnts[i];
+ }
+
+ MPIC_Sendrecv((char *) rbuff + disps[send_idx] * extent, send_cnt,
+ dtype, dst, tag,
+ (char *) rbuff + disps[recv_idx] * extent, recv_cnt,
+ dtype, dst, tag, comm, &status);
+
+ if (newrank > newdst)
+ send_idx = recv_idx;
+
+ mask >>= 1;
+ }
+
+ free(cnts);
+ free(disps);
+
+ }
+ // In the non-power-of-two case, all odd-numbered processes of
+ // rank < 2 * rem send the result to (rank-1), the ranks who didn't
+ // participate above.
+
+ if (rank < 2 * rem) {
+ if (rank % 2) // odd
+ MPIC_Send(rbuff, count, dtype, rank - 1, tag, comm);
+ else // even
+ MPIC_Recv(rbuff, count, dtype, rank + 1, tag, comm, &status);
+ }
+
+ free(tmp_buf);
+ return 0;
+}
