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10 years agoend of ompi collectives addition, with barrier
degomme [Thu, 13 Jun 2013 09:36:27 +0000 (11:36 +0200)]
end of ompi collectives addition, with barrier

10 years agoadd tests for scatter
degomme [Thu, 13 Jun 2013 07:36:03 +0000 (09:36 +0200)]
add tests for scatter

10 years agoadd scatter algos from ompi
degomme [Thu, 13 Jun 2013 07:26:51 +0000 (09:26 +0200)]
add scatter algos from ompi

10 years agounused variable
degomme [Thu, 13 Jun 2013 00:08:58 +0000 (02:08 +0200)]
unused variable

10 years agoMerge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/simgrid/simgrid
degomme [Thu, 13 Jun 2013 00:03:47 +0000 (02:03 +0200)]
Merge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/simgrid/simgrid

10 years agoadd reduce scatter collectives from openmpi, and fix existing one
degomme [Wed, 12 Jun 2013 23:57:57 +0000 (01:57 +0200)]
add reduce scatter collectives from openmpi, and fix existing one
and add tests, without doing separate commits because it is 2AM

10 years agoMerge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/simgrid/simgrid
Jonathan Rouzaud-Cornabas [Wed, 12 Jun 2013 15:13:46 +0000 (17:13 +0200)]
Merge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/simgrid/simgrid

10 years agofix Node.java
Jonathan Rouzaud-Cornabas [Wed, 12 Jun 2013 15:13:37 +0000 (17:13 +0200)]
fix Node.java

10 years agoSimplify the link specifications for libSG_java on win32 (untested).
Arnaud Giersch [Wed, 12 Jun 2013 12:34:57 +0000 (14:34 +0200)]
Simplify the link specifications for libSG_java on win32 (untested).

The variable SIMGRID_LIB_NAME_NAME is never used, and probably gets an
undefined value here.  Remove its definition.

The variable SIMGRID_LIB_NAME is never set.  Remove reference to it.

Finally, use "target_link_libraries" for all platforms since I can't find any
reason to avoid it on win32.

Note that these changes are untested.

10 years agoPrototypes were changed by previous commit.
Arnaud Giersch [Wed, 12 Jun 2013 12:32:10 +0000 (14:32 +0200)]
Prototypes were changed by previous commit.

10 years agofurther simplification of the storage API, keep size only as nmemb was
suter [Wed, 12 Jun 2013 11:28:03 +0000 (13:28 +0200)]
further simplification of the storage API, keep size only as nmemb was
never really used.

10 years agoUse correct modifier, and don't lie about pointer type.
Arnaud Giersch [Wed, 12 Jun 2013 09:49:54 +0000 (11:49 +0200)]
Use correct modifier, and don't lie about pointer type.

10 years agoAddress compilation warnings.
Arnaud Giersch [Wed, 12 Jun 2013 09:42:08 +0000 (11:42 +0200)]
Address compilation warnings.

10 years agoAdd CMakeLists.txt for examples/msg/semaphores/.
Arnaud Giersch [Wed, 12 Jun 2013 09:26:31 +0000 (11:26 +0200)]
Add CMakeLists.txt for examples/msg/semaphores/.

10 years agoSort entries.
Arnaud Giersch [Wed, 12 Jun 2013 09:25:27 +0000 (11:25 +0200)]
Sort entries.

10 years agoAdd files to the dist archive.
Arnaud Giersch [Wed, 12 Jun 2013 09:25:13 +0000 (11:25 +0200)]
Add files to the dist archive.

10 years agoThis file doesn't belong to the dist archive.
Arnaud Giersch [Wed, 12 Jun 2013 09:24:37 +0000 (11:24 +0200)]
This file doesn't belong to the dist archive.

10 years agoUse real parameter name in comment.
Arnaud Giersch [Wed, 12 Jun 2013 09:13:52 +0000 (11:13 +0200)]
Use real parameter name in comment.

10 years agoAS access from MSG layer
Jonathan Rouzaud-Cornabas [Wed, 12 Jun 2013 06:37:41 +0000 (08:37 +0200)]
AS access from MSG layer

10 years agoremove warnings 2
Augustin Degomme [Tue, 11 Jun 2013 22:27:39 +0000 (00:27 +0200)]
remove warnings 2

10 years agoremove warnings
Augustin Degomme [Tue, 11 Jun 2013 22:07:48 +0000 (00:07 +0200)]
remove warnings

10 years agoRemove debuging printf
Paul Bédaride [Fri, 7 Jun 2013 07:21:37 +0000 (09:21 +0200)]
Remove debuging printf

10 years agoFix jmsg_as getSons
Jonathan Rouzaud-Cornabas [Fri, 7 Jun 2013 00:28:39 +0000 (02:28 +0200)]
Fix jmsg_as getSons

10 years agoAdd msg As getModel and GetHosts
Paul Bédaride [Thu, 6 Jun 2013 21:33:25 +0000 (23:33 +0200)]
Add msg As getModel and GetHosts

10 years agoAdd missing files
Paul Bédaride [Thu, 6 Jun 2013 19:51:32 +0000 (21:51 +0200)]
Add missing files

10 years agoAccess AS hierarchy at Msg layer
Paul Bédaride [Thu, 6 Jun 2013 16:57:26 +0000 (18:57 +0200)]
Access AS hierarchy at Msg layer

10 years agoadd test for gather collectives
Augustin Degomme [Tue, 11 Jun 2013 15:53:17 +0000 (17:53 +0200)]
add test for gather collectives

10 years agoadd gather collectives from ompi
Augustin Degomme [Tue, 11 Jun 2013 15:49:46 +0000 (17:49 +0200)]
add gather collectives from ompi

10 years agoFix bug happening with MPI_Datatypes
Augustin Degomme [Tue, 11 Jun 2013 14:14:10 +0000 (16:14 +0200)]
Fix bug happening with MPI_Datatypes
Provide better support for contiguous datatypes

10 years agoadd allgatherv algo from ompi
Augustin Degomme [Tue, 11 Jun 2013 13:26:33 +0000 (15:26 +0200)]
add allgatherv algo from ompi

10 years agoadd new allgather algo from ompi
Augustin Degomme [Tue, 11 Jun 2013 09:02:21 +0000 (11:02 +0200)]
add new allgather algo from ompi

10 years agosize_t instead of unsigned long for storage size and used_size
suter [Tue, 11 Jun 2013 13:21:42 +0000 (15:21 +0200)]
size_t instead of unsigned long for storage size and used_size

10 years agosimplify the simcall stack for file unlink
suter [Tue, 11 Jun 2013 12:59:53 +0000 (14:59 +0200)]
simplify the simcall stack for file unlink
there are still a few leaks: as unlink does not totally destroy the
data structures. If the same file descriptor is reopened (new file is
created), here comes the leak ...

10 years agothere is no stat on files anymore
suter [Tue, 11 Jun 2013 08:55:07 +0000 (10:55 +0200)]
there is no stat on files anymore

10 years agocleaning step: uniform naming (stream to fd) + some cuts at 80
suter [Tue, 11 Jun 2013 08:49:21 +0000 (10:49 +0200)]
cleaning step: uniform naming (stream to fd) + some cuts at 80
characters

10 years agoone parameter less for open
suter [Tue, 11 Jun 2013 08:47:06 +0000 (10:47 +0200)]
one parameter less for open

10 years agoget rid of mode for open in Java bindings too
suter [Tue, 11 Jun 2013 08:45:42 +0000 (10:45 +0200)]
get rid of mode for open in Java bindings too

10 years agoget rid of "mode" parameter in the open file function. It wasn't used
suter [Tue, 11 Jun 2013 08:28:09 +0000 (10:28 +0200)]
get rid of "mode" parameter in the open file function. It wasn't used
anyway.

10 years agoadd missing file in dist
Augustin Degomme [Tue, 11 Jun 2013 08:13:14 +0000 (10:13 +0200)]
add missing file in dist

10 years agoremove warning
Augustin Degomme [Tue, 11 Jun 2013 08:06:54 +0000 (10:06 +0200)]
remove warning

10 years agoremove warning
degomme [Tue, 11 Jun 2013 00:03:22 +0000 (02:03 +0200)]
remove warning

10 years agoadd new algos for reduce from ompi
degomme [Mon, 10 Jun 2013 23:59:42 +0000 (01:59 +0200)]
add new algos for reduce from ompi

10 years agoadd another ompi bcast algo
degomme [Mon, 10 Jun 2013 20:41:53 +0000 (22:41 +0200)]
add another ompi bcast algo

10 years agoadd one more bcast algo
Augustin Degomme [Mon, 10 Jun 2013 16:13:37 +0000 (18:13 +0200)]
add one more bcast algo

10 years agouseless line
Augustin Degomme [Mon, 10 Jun 2013 15:11:17 +0000 (17:11 +0200)]
useless line

10 years agoadd tests for ompi selector
Augustin Degomme [Mon, 10 Jun 2013 14:07:00 +0000 (16:07 +0200)]
add tests for ompi selector

10 years agoadd a new allreduce algorithm from openmpi
Augustin Degomme [Mon, 10 Jun 2013 14:06:13 +0000 (16:06 +0200)]
add a new allreduce algorithm from openmpi

10 years agoactivate commute flag for MPI_Op, adds smpi_op_is_commute to test it (-1 FIXME !)
Augustin Degomme [Mon, 10 Jun 2013 12:50:10 +0000 (14:50 +0200)]
activate commute flag for MPI_Op, adds smpi_op_is_commute to test it (-1 FIXME !)

10 years agoremove warnings in smpi selector
Augustin Degomme [Mon, 10 Jun 2013 12:49:26 +0000 (14:49 +0200)]
remove warnings in smpi selector

10 years agomodel-checker : update tesh for liveness example
Marion Guthmuller [Mon, 10 Jun 2013 13:11:27 +0000 (15:11 +0200)]
model-checker : update tesh for liveness example

10 years agomodel-checker : update tesh
Marion Guthmuller [Mon, 10 Jun 2013 12:59:20 +0000 (14:59 +0200)]
model-checker : update tesh

10 years agomodel-checker : remove out of date tesh of chord example
Marion Guthmuller [Mon, 10 Jun 2013 12:55:51 +0000 (14:55 +0200)]
model-checker : remove out of date tesh of chord example

10 years agoavoid double variable definition when tracing is activated (+some
suter [Mon, 10 Jun 2013 07:11:33 +0000 (09:11 +0200)]
avoid double variable definition when tracing is activated (+some
indenting)

10 years agomodel-checker : free memory
Marion Guthmuller [Sat, 8 Jun 2013 17:40:41 +0000 (19:40 +0200)]
model-checker : free memory

10 years agomodel-checker : increase number of colors for dot output
Marion Guthmuller [Sat, 8 Jun 2013 17:15:17 +0000 (19:15 +0200)]
model-checker : increase number of colors for dot output

10 years agocosmetics : indent
Marion Guthmuller [Fri, 7 Jun 2013 10:06:14 +0000 (12:06 +0200)]
cosmetics : indent

10 years agomodel-checker : use raw_heap instead of std_heap
Marion Guthmuller [Thu, 6 Jun 2013 20:48:49 +0000 (22:48 +0200)]
model-checker : use raw_heap instead of std_heap

10 years agomodel-checker : fix dot output for smpi examples
Marion Guthmuller [Thu, 6 Jun 2013 20:31:39 +0000 (22:31 +0200)]
model-checker : fix dot output for smpi examples

10 years agocosmetics : indent
Marion Guthmuller [Thu, 6 Jun 2013 15:26:46 +0000 (17:26 +0200)]
cosmetics : indent

10 years agomodel-checker : add information in counter-example and dot output
Marion Guthmuller [Wed, 5 Jun 2013 21:48:07 +0000 (23:48 +0200)]
model-checker : add information in counter-example and dot output

10 years agoNew actions for the time independent trace replay framework:
George Markomanolis [Sat, 8 Jun 2013 14:51:53 +0000 (16:51 +0200)]
New actions for the time independent trace replay framework:
Gather
AllGatherV
ReduceScatter

* I changed some declarations from xbt_new0() to calloc(), I had to use an MPI datatype variable declared as MPI_CURRENT_TYPE and it was not possible with xbt_new0().
* Some new example files for the collectives calls with real values extracted from BigDFT.

10 years agorename old alltoall selector function, which will probably be removed soon
degomme [Fri, 7 Jun 2013 12:42:28 +0000 (14:42 +0200)]
rename old alltoall selector function, which will probably be removed soon

10 years agoadd ompi selector for smpi collectives (use --cfg=smpi/coll_selector="ompi" to activate)
degomme [Fri, 7 Jun 2013 12:42:01 +0000 (14:42 +0200)]
add ompi selector for smpi collectives (use --cfg=smpi/coll_selector="ompi" to activate)

10 years agosimpler version of simcall to get the file of a file
suter [Fri, 7 Jun 2013 10:08:22 +0000 (12:08 +0200)]
simpler version of simcall to get the file of a file

10 years agoallow tasks to take no output nor produce any output
suter [Thu, 6 Jun 2013 20:31:42 +0000 (22:31 +0200)]
allow tasks to take no output nor produce any output

10 years agoBugfix
Lionel [Thu, 6 Jun 2013 22:55:03 +0000 (00:55 +0200)]
Bugfix

10 years agoFix exception handling in Java semaphores
Lionel [Thu, 6 Jun 2013 22:20:02 +0000 (00:20 +0200)]
Fix exception handling in Java semaphores

10 years agoBugfix in semaphore code
Lionel [Thu, 6 Jun 2013 21:44:36 +0000 (23:44 +0200)]
Bugfix in semaphore code

10 years agoAdd correct headers for Java exports
Lionel [Thu, 6 Jun 2013 21:44:14 +0000 (23:44 +0200)]
Add correct headers for Java exports

10 years agoBugfix
Lionel [Thu, 6 Jun 2013 21:29:34 +0000 (23:29 +0200)]
Bugfix

10 years agoAn example to test MSG semaphores
Lionel [Thu, 6 Jun 2013 21:16:42 +0000 (23:16 +0200)]
An example to test MSG semaphores

10 years agoUpdate ChangeLog for Semaphores in Java
Lionel [Thu, 6 Jun 2013 19:59:47 +0000 (21:59 +0200)]
Update ChangeLog for Semaphores in Java

10 years agoMerge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/simgrid/simgrid
Lionel [Thu, 6 Jun 2013 19:43:26 +0000 (21:43 +0200)]
Merge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/simgrid/simgrid

10 years agoAdded Semaphore visibility to the Java bindings
Lionel [Thu, 6 Jun 2013 19:40:44 +0000 (21:40 +0200)]
Added Semaphore visibility to the Java bindings

10 years agorevalidate
suter [Thu, 6 Jun 2013 19:36:13 +0000 (21:36 +0200)]
revalidate

10 years agosetting result help to propogate it
suter [Thu, 6 Jun 2013 19:30:49 +0000 (21:30 +0200)]
setting result help to propogate it

10 years agono need to free the file descriptor when you just want the file size
suter [Thu, 6 Jun 2013 17:23:11 +0000 (19:23 +0200)]
no need to free the file descriptor when you just want the file size
... have to think harder when copy/pasting

10 years agostream to fd
suter [Thu, 6 Jun 2013 17:22:00 +0000 (19:22 +0200)]
stream to fd

10 years agocopy/paste error
suter [Thu, 6 Jun 2013 17:07:18 +0000 (19:07 +0200)]
copy/paste error

10 years agofp => fd (for file descriptor)
suter [Thu, 6 Jun 2013 17:05:56 +0000 (19:05 +0200)]
fp => fd (for file descriptor)

10 years agoWow, I wrote a simcall! 11 files to modify to do a simple get_size on a
suter [Thu, 6 Jun 2013 16:40:06 +0000 (18:40 +0200)]
Wow, I wrote a simcall! 11 files to modify to do a simple get_size on a
file ...

10 years agounsigned long to size_t
suter [Thu, 6 Jun 2013 15:52:32 +0000 (17:52 +0200)]
unsigned long to size_t

10 years agoadd a function to retrieve the size of an msg_file_t
suter [Thu, 6 Jun 2013 15:27:05 +0000 (17:27 +0200)]
add a function to retrieve the size of an msg_file_t

10 years agoMake semaphores visible from MSG
Martin Quinson [Thu, 6 Jun 2013 16:21:24 +0000 (18:21 +0200)]
Make semaphores visible from MSG

10 years agoExport setAsyncMailbox to Java world
Lionel [Thu, 6 Jun 2013 13:05:54 +0000 (15:05 +0200)]
Export setAsyncMailbox to Java world

10 years agomore cleanups related to stat on files
suter [Thu, 6 Jun 2013 08:31:04 +0000 (10:31 +0200)]
more cleanups related to stat on files

10 years agono more stat structure
suter [Thu, 6 Jun 2013 08:28:17 +0000 (10:28 +0200)]
no more stat structure

10 years agofile_stat.h has been removed
suter [Thu, 6 Jun 2013 08:25:23 +0000 (10:25 +0200)]
file_stat.h has been removed

10 years agoremove references to an include file that doesn't exist anymore
suter [Thu, 6 Jun 2013 08:23:25 +0000 (10:23 +0200)]
remove references to an include file that doesn't exist anymore

10 years agokill some dead code
Martin Quinson [Thu, 6 Jun 2013 07:49:55 +0000 (09:49 +0200)]
kill some dead code

10 years agocommit my eclipse configuration file so that others can use it
Martin Quinson [Thu, 6 Jun 2013 07:24:07 +0000 (09:24 +0200)]
commit my eclipse configuration file so that others can use it

10 years agothese got regenerated, apparently with a newer version of bison
Martin Quinson [Thu, 6 Jun 2013 07:02:05 +0000 (09:02 +0200)]
these got regenerated, apparently with a newer version of bison

10 years agounignore eclipse project file, ignore some crappy compiled files
Martin Quinson [Thu, 6 Jun 2013 06:59:48 +0000 (08:59 +0200)]
unignore eclipse project file, ignore some crappy compiled files

10 years agosay that we messed with msg_file
suter [Wed, 5 Jun 2013 20:50:21 +0000 (22:50 +0200)]
say that we messed with msg_file

10 years agorevalidate tesh to account for BIG FAT WARNING
suter [Wed, 5 Jun 2013 20:42:35 +0000 (22:42 +0200)]
revalidate tesh to account for BIG FAT WARNING

10 years agorevalidate tesh
suter [Wed, 5 Jun 2013 20:41:04 +0000 (22:41 +0200)]
revalidate tesh

10 years agosimplify the examples of file usage
suter [Wed, 5 Jun 2013 20:29:22 +0000 (22:29 +0200)]
simplify the examples of file usage

10 years agopath and size should be enough to describe files stored on a storage
suter [Wed, 5 Jun 2013 20:25:56 +0000 (22:25 +0200)]
path and size should be enough to describe files stored on a storage
resource

10 years agoSimplify the way files are described. Get rid of the stats, the
suter [Wed, 5 Jun 2013 20:25:06 +0000 (22:25 +0200)]
Simplify the way files are described. Get rid of the stats, the
MSG_file_stat, and all the underlying functions

10 years agostart to simplify the stack of structures for files. Get rid of stats
suter [Wed, 5 Jun 2013 15:47:18 +0000 (17:47 +0200)]
start to simplify the stack of structures for files. Get rid of stats
and just keep name, size and mount point