X-Git-Url: http://info.iut-bm.univ-fcomte.fr/pub/gitweb/simgrid.git/blobdiff_plain/6efc4db71d869ae5af39d17eeeff2a615aba3ccf..292a2a9b6a68f7b9bd620b8222d20ea91fe3bcf9:/src/smpi/smpi_base.c diff --git a/src/smpi/smpi_base.c b/src/smpi/smpi_base.c index 2e192a05ae..5192ca3be9 100644 --- a/src/smpi/smpi_base.c +++ b/src/smpi/smpi_base.c @@ -2,116 +2,211 @@ * All rights reserved. */ /* This program is free software; you can redistribute it and/or modify it - * under the terms of the license (GNU LGPL) which comes with this package. */ + * under the terms of the license (GNU LGPL) which comes with this package. */ #include "private.h" -#include "xbt/time.h" +#include "xbt/virtu.h" +#include "mc/mc.h" +#include "xbt/replay.h" +#include +#include "simix/smx_private.h" +#include "surf/surf.h" -XBT_LOG_NEW_DEFAULT_SUBCATEGORY(smpi_base, smpi, - "Logging specific to SMPI (base)"); -XBT_LOG_EXTERNAL_CATEGORY(smpi_base); -XBT_LOG_EXTERNAL_CATEGORY(smpi_bench); -XBT_LOG_EXTERNAL_CATEGORY(smpi_kernel); -XBT_LOG_EXTERNAL_CATEGORY(smpi_mpi); -XBT_LOG_EXTERNAL_CATEGORY(smpi_mpi_dt); -XBT_LOG_EXTERNAL_CATEGORY(smpi_coll); -XBT_LOG_EXTERNAL_CATEGORY(smpi_receiver); -XBT_LOG_EXTERNAL_CATEGORY(smpi_sender); -XBT_LOG_EXTERNAL_CATEGORY(smpi_util); -#define EAGER_LIMIT 65536 -#define RDV_TAG (-10) +XBT_LOG_NEW_DEFAULT_SUBCATEGORY(smpi_base, smpi, "Logging specific to SMPI (base)"); -void smpi_process_init(int* argc, char*** argv) { - int index; - smpi_process_data_t data; - smx_process_t proc; - proc = SIMIX_process_self(); - index = atoi((*argv)[1]); - data = smpi_process_remote_data(index); - SIMIX_process_set_data(proc, data); - if (*argc > 2) { - free((*argv)[1]); - memmove(&(*argv)[1], &(*argv)[2], sizeof(char *) * (*argc - 2)); - (*argv)[(*argc) - 1] = NULL; - } - (*argc)--; - DEBUG2("<%d> New process in the game: %p", index, proc); -} +static int match_recv(void* a, void* b, smx_action_t ignored) { + MPI_Request ref = (MPI_Request)a; + MPI_Request req = (MPI_Request)b; + XBT_DEBUG("Trying to match a recv of src %d against %d, tag %d against %d",ref->src,req->src, ref->tag, req->tag); -void smpi_process_destroy(void) { - int index = smpi_process_index(); + xbt_assert(ref, "Cannot match recv against null reference"); + xbt_assert(req, "Cannot match recv against null request"); + return (ref->src == MPI_ANY_SOURCE || req->src == ref->src) + && (ref->tag == MPI_ANY_TAG || req->tag == ref->tag); +} - DEBUG1("<%d> Process left the game", index); +static int match_send(void* a, void* b,smx_action_t ignored) { + MPI_Request ref = (MPI_Request)a; + MPI_Request req = (MPI_Request)b; + XBT_DEBUG("Trying to match a send of src %d against %d, tag %d against %d",ref->src,req->src, ref->tag, req->tag); + xbt_assert(ref, "Cannot match send against null reference"); + xbt_assert(req, "Cannot match send against null request"); + return (req->src == MPI_ANY_SOURCE || req->src == ref->src) + && (req->tag == MPI_ANY_TAG || req->tag == ref->tag); } -static MPI_Request build_request(void* buf, int count, MPI_Datatype datatype, int src, int dst, int tag, MPI_Comm comm, unsigned flags) { +static MPI_Request build_request(void *buf, int count, + MPI_Datatype datatype, int src, int dst, + int tag, MPI_Comm comm, unsigned flags) +{ MPI_Request request; + void *old_buf = NULL; + request = xbt_new(s_smpi_mpi_request_t, 1); + + s_smpi_subtype_t *subtype = datatype->substruct; + + if(datatype->has_subtype == 1){ + // This part handles the problem of non-contignous memory + old_buf = buf; + buf = malloc(count*smpi_datatype_size(datatype)); + if (flags & SEND) { + subtype->serialize(old_buf, buf, count, datatype->substruct); + } + } + request->buf = buf; + // This part handles the problem of non-contignous memory (for the + // unserialisation at the reception) + request->old_buf = old_buf; + request->old_type = datatype; + request->size = smpi_datatype_size(datatype) * count; request->src = src; request->dst = dst; request->tag = tag; request->comm = comm; - request->rdv = NULL; - request->pair = NULL; - request->complete = 0; - request->match = MPI_REQUEST_NULL; + request->action = NULL; request->flags = flags; - if(request->size < EAGER_LIMIT) { - request->ack = MPI_REQUEST_NULL; - } else { - request->ack = xbt_new(s_smpi_mpi_request_t, 1); - request->ack->buf = NULL; - request->ack->size = 0; - request->ack->src = dst; - request->ack->dst = src; - request->ack->tag = RDV_TAG; - request->ack->comm = comm; - request->ack->rdv = NULL; - request->ack->pair = NULL; - request->ack->complete = 0; - request->ack->match = MPI_REQUEST_NULL; - request->ack->flags = NON_PERSISTENT | ((request->flags & RECV) == RECV ? SEND : RECV); - smpi_mpi_start(request->ack); - } + request->detached = 0; +#ifdef HAVE_TRACING + request->send = 0; + request->recv = 0; +#endif return request; } + +void smpi_empty_status(MPI_Status * status) { + if(status != MPI_STATUS_IGNORE) { + status->MPI_SOURCE=MPI_ANY_SOURCE; + status->MPI_TAG=MPI_ANY_TAG; + status->count=0; + } +} + +void smpi_action_trace_run(char *path) +{ + char *name; + xbt_dynar_t todo; + xbt_dict_cursor_t cursor; + + action_fp=NULL; + if (path) { + action_fp = fopen(path, "r"); + xbt_assert(action_fp != NULL, "Cannot open %s: %s", path, + strerror(errno)); + } + + if (!xbt_dict_is_empty(action_queues)) { + XBT_WARN + ("Not all actions got consumed. If the simulation ended successfully (without deadlock), you may want to add new processes to your deployment file."); + + + xbt_dict_foreach(action_queues, cursor, name, todo) { + XBT_WARN("Still %lu actions for %s", xbt_dynar_length(todo), name); + } + } + + if (path) + fclose(action_fp); + xbt_dict_free(&action_queues); + action_queues = xbt_dict_new_homogeneous(NULL); +} + +static void smpi_mpi_request_free_voidp(void* request) +{ + MPI_Request req = request; + smpi_mpi_request_free(&req); +} + /* MPI Low level calls */ -MPI_Request smpi_mpi_send_init(void* buf, int count, MPI_Datatype datatype, int dst, int tag, MPI_Comm comm) { - MPI_Request request = build_request(buf, count, datatype, smpi_comm_rank(comm), dst, tag, comm, PERSISTENT | SEND); +MPI_Request smpi_mpi_send_init(void *buf, int count, MPI_Datatype datatype, + int dst, int tag, MPI_Comm comm) +{ + MPI_Request request = + build_request(buf, count, datatype, smpi_comm_rank(comm), dst, tag, + comm, PERSISTENT | SEND); return request; } -MPI_Request smpi_mpi_recv_init(void* buf, int count, MPI_Datatype datatype, int src, int tag, MPI_Comm comm) { - MPI_Request request = build_request(buf, count, datatype, src, smpi_comm_rank(comm), tag, comm, PERSISTENT | RECV); +MPI_Request smpi_mpi_recv_init(void *buf, int count, MPI_Datatype datatype, + int src, int tag, MPI_Comm comm) +{ + MPI_Request request = + build_request(buf, count, datatype, src, smpi_comm_rank(comm), tag, + comm, PERSISTENT | RECV); return request; } -void smpi_mpi_start(MPI_Request request) { - xbt_assert0(request->complete == 0, "Cannot start a non-finished communication"); - if(request->size >= EAGER_LIMIT) { - print_request("RDV ack", request->ack); - smpi_mpi_wait(&request->ack, MPI_STATUS_IGNORE); - } - if((request->flags & RECV) == RECV) { - smpi_process_post_recv(request); +void smpi_mpi_start(MPI_Request request) +{ + smx_rdv_t mailbox; + + xbt_assert(!request->action, + "Cannot (re)start a non-finished communication"); + if(request->flags & RECV) { print_request("New recv", request); - request->pair = SIMIX_network_irecv(request->rdv, request->buf, &request->size); + if (request->size < surf_cfg_get_int("smpi/async_small_thres")) + mailbox = smpi_process_mailbox_small(); + else + mailbox = smpi_process_mailbox(); + + // FIXME: SIMIX does not yet support non-contiguous datatypes + request->action = simcall_comm_irecv(mailbox, request->buf, &request->size, &match_recv, request); } else { - smpi_process_post_send(request->comm, request); // FIXME + + int receiver = smpi_group_index(smpi_comm_group(request->comm), request->dst); +/* if(receiver == MPI_UNDEFINED) {*/ +/* XBT_WARN("Trying to send a message to a wrong rank");*/ +/* return;*/ +/* }*/ print_request("New send", request); - request->pair = SIMIX_network_isend(request->rdv, request->size, -1.0, request->buf, request->size, NULL); + if (request->size < surf_cfg_get_int("smpi/async_small_thres")) { // eager mode + mailbox = smpi_process_remote_mailbox_small(receiver); + }else{ + XBT_DEBUG("Send request %p is not in the permanent receive mailbox (buf: %p)",request,request->buf); + mailbox = smpi_process_remote_mailbox(receiver); + } + if (request->size < 64*1024 ) { //(FIXME: this limit should be configurable) + void *oldbuf = NULL; + if(request->old_type->has_subtype == 0){ + oldbuf = request->buf; + request->detached = 1; + if (oldbuf){ + request->buf = malloc(request->size); + memcpy(request->buf,oldbuf,request->size); + } + } + XBT_DEBUG("Send request %p is detached; buf %p copied into %p",request,oldbuf,request->buf); + } + + request->action = + simcall_comm_isend(mailbox, request->size, -1.0, + request->buf, request->size, + &match_send, + &smpi_mpi_request_free_voidp, // how to free the userdata if a detached send fails + request, + // detach if msg size < eager/rdv switch limit + request->detached); + +#ifdef HAVE_TRACING + /* FIXME: detached sends are not traceable (request->action == NULL) */ + if (request->action) + simcall_set_category(request->action, TRACE_internal_smpi_get_category()); +#endif + } + } -void smpi_mpi_startall(int count, MPI_Request* requests) { +void smpi_mpi_startall(int count, MPI_Request * requests) +{ int i; for(i = 0; i < count; i++) { @@ -119,57 +214,82 @@ void smpi_mpi_startall(int count, MPI_Request* requests) { } } -void smpi_mpi_request_free(MPI_Request* request) { +void smpi_mpi_request_free(MPI_Request * request) +{ xbt_free(*request); *request = MPI_REQUEST_NULL; } -MPI_Request smpi_isend_init(void* buf, int count, MPI_Datatype datatype, int dst, int tag, MPI_Comm comm) { - MPI_Request request = build_request(buf, count, datatype, smpi_comm_rank(comm), dst, tag, comm, NON_PERSISTENT | SEND); +MPI_Request smpi_isend_init(void *buf, int count, MPI_Datatype datatype, + int dst, int tag, MPI_Comm comm) +{ + MPI_Request request = + build_request(buf, count, datatype, smpi_comm_rank(comm), dst, tag, + comm, NON_PERSISTENT | SEND); return request; } -MPI_Request smpi_mpi_isend(void* buf, int count, MPI_Datatype datatype, int dst, int tag, MPI_Comm comm) { - MPI_Request request = smpi_isend_init(buf, count, datatype, dst, tag, comm); +MPI_Request smpi_mpi_isend(void *buf, int count, MPI_Datatype datatype, + int dst, int tag, MPI_Comm comm) +{ + MPI_Request request = + smpi_isend_init(buf, count, datatype, dst, tag, comm); smpi_mpi_start(request); return request; } -MPI_Request smpi_irecv_init(void* buf, int count, MPI_Datatype datatype, int src, int tag, MPI_Comm comm) { - MPI_Request request = build_request(buf, count, datatype, src, smpi_comm_rank(comm), tag, comm, NON_PERSISTENT | RECV); - +MPI_Request smpi_irecv_init(void *buf, int count, MPI_Datatype datatype, + int src, int tag, MPI_Comm comm) +{ + MPI_Request request = + build_request(buf, count, datatype, src, smpi_comm_rank(comm), tag, + comm, NON_PERSISTENT | RECV); return request; } -MPI_Request smpi_mpi_irecv(void* buf, int count, MPI_Datatype datatype, int src, int tag, MPI_Comm comm) { - MPI_Request request = smpi_irecv_init(buf, count, datatype, src, tag, comm); +MPI_Request smpi_mpi_irecv(void *buf, int count, MPI_Datatype datatype, + int src, int tag, MPI_Comm comm) +{ + MPI_Request request = + smpi_irecv_init(buf, count, datatype, src, tag, comm); smpi_mpi_start(request); return request; } -void smpi_mpi_recv(void* buf, int count, MPI_Datatype datatype, int src, int tag, MPI_Comm comm, MPI_Status* status) { +void smpi_mpi_recv(void *buf, int count, MPI_Datatype datatype, int src, + int tag, MPI_Comm comm, MPI_Status * status) +{ MPI_Request request; - request = smpi_mpi_irecv(buf, count, datatype, src, tag, comm); smpi_mpi_wait(&request, status); } -void smpi_mpi_send(void* buf, int count, MPI_Datatype datatype, int dst, int tag, MPI_Comm comm) { + + +void smpi_mpi_send(void *buf, int count, MPI_Datatype datatype, int dst, + int tag, MPI_Comm comm) +{ MPI_Request request; request = smpi_mpi_isend(buf, count, datatype, dst, tag, comm); smpi_mpi_wait(&request, MPI_STATUS_IGNORE); } -void smpi_mpi_sendrecv(void* sendbuf, int sendcount, MPI_Datatype sendtype, int dst, int sendtag, void* recvbuf, int recvcount, MPI_Datatype recvtype, int src, int recvtag, MPI_Comm comm, MPI_Status* status) { +void smpi_mpi_sendrecv(void *sendbuf, int sendcount, MPI_Datatype sendtype, + int dst, int sendtag, void *recvbuf, int recvcount, + MPI_Datatype recvtype, int src, int recvtag, + MPI_Comm comm, MPI_Status * status) +{ MPI_Request requests[2]; MPI_Status stats[2]; - requests[0] = smpi_isend_init(sendbuf, sendcount, sendtype, dst, sendtag, comm); - requests[1] = smpi_irecv_init(recvbuf, recvcount, recvtype, src, recvtag, comm); + requests[0] = + smpi_isend_init(sendbuf, sendcount, sendtype, dst, sendtag, comm); + requests[1] = + smpi_irecv_init(recvbuf, recvcount, recvtype, src, recvtag, comm); smpi_mpi_startall(2, requests); smpi_mpi_waitall(2, requests, stats); if(status != MPI_STATUS_IGNORE) { @@ -178,157 +298,341 @@ void smpi_mpi_sendrecv(void* sendbuf, int sendcount, MPI_Datatype sendtype, int } } -static void finish_wait(MPI_Request* request, MPI_Status* status) { +int smpi_mpi_get_count(MPI_Status * status, MPI_Datatype datatype) +{ + return status->count / smpi_datatype_size(datatype); +} + +static void finish_wait(MPI_Request * request, MPI_Status * status) +{ + MPI_Request req = *request; + // if we have a sender, we should use its data, and not the data from the receive + //FIXME : mail fail if req->action has already been freed, the pointer being invalid + if((req->action)&& + (req->src==MPI_ANY_SOURCE || req->tag== MPI_ANY_TAG)) + req = (MPI_Request)SIMIX_comm_get_src_data((*request)->action); + if(status != MPI_STATUS_IGNORE) { - status->MPI_SOURCE = (*request)->src; - status->MPI_TAG = (*request)->tag; + status->MPI_SOURCE = req->src; + status->MPI_TAG = req->tag; + //if((*request)->action && ((MPI_Request)SIMIX_comm_get_src_data((*request)->action))->size == (*request)->size) status->MPI_ERROR = MPI_SUCCESS; + //else status->MPI_ERROR = MPI_ERR_TRUNCATE; + // this handles the case were size in receive differs from size in send + // FIXME: really this should just contain the count of receive-type blocks, + // right? + status->count = req->size; } - print_request("finishing wait", *request); - if((*request)->complete == 1) { - SIMIX_rdv_destroy((*request)->rdv); - } else { - (*request)->match->complete = 1; - (*request)->match->match = MPI_REQUEST_NULL; + req = *request; + + print_request("Finishing", req); + MPI_Datatype datatype = req->old_type; + if(datatype->has_subtype == 1){ + // This part handles the problem of non-contignous memory + // the unserialization at the reception + s_smpi_subtype_t *subtype = datatype->substruct; + if(req->flags & RECV) { + subtype->unserialize(req->buf, req->old_buf, req->size/smpi_datatype_size(datatype) , datatype->substruct); + } + if(req->detached == 0) free(req->buf); } - if(((*request)->flags & NON_PERSISTENT) == NON_PERSISTENT) { + + if(req->flags & NON_PERSISTENT) { smpi_mpi_request_free(request); } else { - (*request)->rdv = NULL; - (*request)->pair = NULL; + req->action = NULL; } } -int smpi_mpi_test(MPI_Request* request, MPI_Status* status) { - int flag = (*request)->complete; +int smpi_mpi_test(MPI_Request * request, MPI_Status * status) { + int flag; + //assume that request is not MPI_REQUEST_NULL (filtered in PMPI_Test or smpi_mpi_testall before) + if ((*request)->action == NULL) + flag = 1; + else + flag = simcall_comm_test((*request)->action); if(flag) { - SIMIX_communication_destroy((*request)->pair); finish_wait(request, status); + }else{ + smpi_empty_status(status); } return flag; } -int smpi_mpi_testany(int count, MPI_Request requests[], int* index, MPI_Status* status) { - int i, flag; +int smpi_mpi_testany(int count, MPI_Request requests[], int *index, + MPI_Status * status) +{ + xbt_dynar_t comms; + int i, flag, size; + int* map; *index = MPI_UNDEFINED; flag = 0; - for(i = 0; i < count; i++) { - if(requests[i] != MPI_REQUEST_NULL && requests[i]->complete) { - SIMIX_communication_destroy(requests[i]->pair); - finish_wait(&requests[i], status); - *index = i; - flag = 1; - break; + if(count > 0) { + comms = xbt_dynar_new(sizeof(smx_action_t), NULL); + map = xbt_new(int, count); + size = 0; + for(i = 0; i < count; i++) { + if((requests[i]!=MPI_REQUEST_NULL) && requests[i]->action) { + xbt_dynar_push(comms, &requests[i]->action); + map[size] = i; + size++; + } + } + if(size > 0) { + i = simcall_comm_testany(comms); + // not MPI_UNDEFINED, as this is a simix return code + if(i != -1) { + *index = map[i]; + finish_wait(&requests[*index], status); + flag = 1; + } + }else{ + //all requests are null or inactive, return true + flag=1; + smpi_empty_status(status); } + xbt_free(map); + xbt_dynar_free(&comms); } + return flag; } -void smpi_mpi_wait(MPI_Request* request, MPI_Status* status) { - print_request("wait", *request); - // data is null if receiver waits before sender enters the rdv - if((*request)->complete) { - SIMIX_communication_destroy((*request)->pair); - } else { - SIMIX_network_wait((*request)->pair, -1.0); + +int smpi_mpi_testall(int count, MPI_Request requests[], + MPI_Status status[]) +{ + MPI_Status stat; + MPI_Status *pstat = status == MPI_STATUSES_IGNORE ? MPI_STATUS_IGNORE : &stat; + int flag=1; + int i; + for(i=0; i0){ + mailbox = smpi_process_mailbox_small(); + XBT_DEBUG("trying to probe the perm recv mailbox"); + request->action = simcall_comm_iprobe(mailbox, request->src, request->tag, &match_recv, (void*)request); + } + if (request->action==NULL){ + mailbox = smpi_process_mailbox(); + XBT_DEBUG("trying to probe the other mailbox"); + request->action = simcall_comm_iprobe(mailbox, request->src, request->tag, &match_recv, (void*)request); + } + + if(request->action){ + MPI_Request req = (MPI_Request)SIMIX_comm_get_src_data(request->action); + *flag = 1; + if(status != MPI_STATUS_IGNORE) { + status->MPI_SOURCE = req->src; + status->MPI_TAG = req->tag; + status->MPI_ERROR = MPI_SUCCESS; + status->count = req->size; + } + } + else *flag = 0; + smpi_mpi_request_free(&request); + + return; +} + +void smpi_mpi_wait(MPI_Request * request, MPI_Status * status) +{ + print_request("Waiting", *request); + if ((*request)->action != NULL) { // this is not a detached send + simcall_comm_wait((*request)->action, -1.0); + finish_wait(request, status); + } + // FIXME for a detached send, finish_wait is not called: +} + +int smpi_mpi_waitany(int count, MPI_Request requests[], + MPI_Status * status) +{ xbt_dynar_t comms; int i, size, index; - int* map; + int *map; index = MPI_UNDEFINED; if(count > 0) { - // First check for already completed requests + // Wait for a request to complete + comms = xbt_dynar_new(sizeof(smx_action_t), NULL); + map = xbt_new(int, count); + size = 0; + XBT_DEBUG("Wait for one of"); for(i = 0; i < count; i++) { - if(requests[i] != MPI_REQUEST_NULL && requests[i]->complete) { - index = i; - SIMIX_communication_destroy(requests[index]->pair); // always succeeds (but cleans the simix layer) - break; + if((requests[i] != MPI_REQUEST_NULL) && (requests[i]->action != NULL)) { + print_request("Waiting any ", requests[i]); + xbt_dynar_push(comms, &requests[i]->action); + map[size] = i; + size++; } } - if(index == MPI_UNDEFINED) { - // Otherwise, wait for a request to complete - comms = xbt_dynar_new(sizeof(smx_comm_t), NULL); - map = xbt_new(int, count); - size = 0; - DEBUG0("Wait for one of"); - for(i = 0; i < count; i++) { - if(requests[i] != MPI_REQUEST_NULL && requests[i]->complete == 0) { - print_request(" ", requests[i]); - xbt_dynar_push(comms, &requests[i]->pair); - map[size] = i; - size++; - } - } - if(size > 0) { - index = SIMIX_network_waitany(comms); - index = map[index]; + if(size > 0) { + i = simcall_comm_waitany(comms); + + // not MPI_UNDEFINED, as this is a simix return code + if (i != -1) { + index = map[i]; + finish_wait(&requests[index], status); } - xbt_free(map); - xbt_dynar_free(&comms); - } - if(index != MPI_UNDEFINED) { - finish_wait(&requests[index], status); } + xbt_free(map); + xbt_dynar_free(&comms); } + + if (index==MPI_UNDEFINED) + smpi_empty_status(status); + return index; } -void smpi_mpi_waitall(int count, MPI_Request requests[], MPI_Status status[]) { - int index; +int smpi_mpi_waitall(int count, MPI_Request requests[], + MPI_Status status[]) +{ + int index, c; MPI_Status stat; - - while(count > 0) { - index = smpi_mpi_waitany(count, requests, &stat); - if(index == MPI_UNDEFINED) { - break; + MPI_Status *pstat = status == MPI_STATUSES_IGNORE ? MPI_STATUS_IGNORE : &stat; + int retvalue=MPI_SUCCESS; + //tag invalid requests in the set + for(c = 0; c < count; c++) { + if(requests[c]==MPI_REQUEST_NULL || requests[c]->dst == MPI_PROC_NULL ){ + if(status != MPI_STATUSES_IGNORE) + smpi_empty_status(&status[c]); + }else if(requests[c]->src == MPI_PROC_NULL ){ + if(status != MPI_STATUSES_IGNORE) { + smpi_empty_status(&status[c]); + status[c].MPI_SOURCE=MPI_PROC_NULL; + } } - if(status != MPI_STATUS_IGNORE) { - memcpy(&status[index], &stat, sizeof(stat)); + } + + for(c = 0; c < count; c++) { + if(MC_is_active()) { + smpi_mpi_wait(&requests[c], pstat); + index = c; + } else { + index = smpi_mpi_waitany(count, requests, pstat); + if(index == MPI_UNDEFINED) { + break; + } + if(status != MPI_STATUSES_IGNORE) { + memcpy(&status[index], pstat, sizeof(*pstat)); + if(status[index].MPI_ERROR==MPI_ERR_TRUNCATE)retvalue=MPI_ERR_IN_STATUS; + + } } - // FIXME: check this -v - // Move the last request to the found position - requests[index] = requests[count - 1]; - requests[count - 1] = MPI_REQUEST_NULL; - count--; } + return retvalue; } -int smpi_mpi_waitsome(int incount, MPI_Request requests[], int* indices, MPI_Status status[]) { - int i, count; +int smpi_mpi_waitsome(int incount, MPI_Request requests[], int *indices, + MPI_Status status[]) +{ + int i, count, index; + MPI_Status stat; + MPI_Status *pstat = status == MPI_STATUSES_IGNORE ? MPI_STATUS_IGNORE : &stat; count = 0; - for(i = 0; i < incount; i++) { - if(requests[i] != MPI_REQUEST_NULL && requests[i]->complete) { - SIMIX_communication_destroy(requests[i]->pair); - finish_wait(&requests[i], status != MPI_STATUS_IGNORE ? &status[i] : MPI_STATUS_IGNORE); - indices[count] = i; + for(i = 0; i < incount; i++) + { + index=smpi_mpi_waitany(incount, requests, pstat); + if(index!=MPI_UNDEFINED){ + indices[count] = index; count++; + if(status != MPI_STATUSES_IGNORE) { + memcpy(&status[index], pstat, sizeof(*pstat)); + } + }else{ + return MPI_UNDEFINED; } } return count; } -void smpi_mpi_bcast(void* buf, int count, MPI_Datatype datatype, int root, MPI_Comm comm) { +int smpi_mpi_testsome(int incount, MPI_Request requests[], int *indices, + MPI_Status status[]) +{ + int i, count, count_dead; + MPI_Status stat; + MPI_Status *pstat = status == MPI_STATUSES_IGNORE ? MPI_STATUS_IGNORE : &stat; + + count = 0; + count_dead = 0; + for(i = 0; i < incount; i++) { + if((requests[i] != MPI_REQUEST_NULL)) { + if(smpi_mpi_test(&requests[i], pstat)) { + indices[count] = i; + count++; + if(status != MPI_STATUSES_IGNORE) { + memcpy(&status[i], pstat, sizeof(*pstat)); + } + } + }else{ + count_dead++; + } + } + if(count_dead==incount)return MPI_UNDEFINED; + else return count; +} + +void smpi_mpi_bcast(void *buf, int count, MPI_Datatype datatype, int root, + MPI_Comm comm) +{ // arity=2: a binary tree, arity=4 seem to be a good setting (see P2P-MPI)) nary_tree_bcast(buf, count, datatype, root, comm, 4); } -void smpi_mpi_barrier(MPI_Comm comm) { +void smpi_mpi_barrier(MPI_Comm comm) +{ // arity=2: a binary tree, arity=4 seem to be a good setting (see P2P-MPI)) nary_tree_barrier(comm, 4); } -void smpi_mpi_gather(void* sendbuf, int sendcount, MPI_Datatype sendtype, void* recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm) { +void smpi_mpi_gather(void *sendbuf, int sendcount, MPI_Datatype sendtype, + void *recvbuf, int recvcount, MPI_Datatype recvtype, + int root, MPI_Comm comm) +{ int system_tag = 666; - int rank, size, src, index, sendsize, recvsize; - MPI_Request* requests; + int rank, size, src, index; + MPI_Aint lb = 0, recvext = 0; + MPI_Request *requests; rank = smpi_comm_rank(comm); size = smpi_comm_size(comm); @@ -336,16 +640,19 @@ void smpi_mpi_gather(void* sendbuf, int sendcount, MPI_Datatype sendtype, void* // Send buffer to root smpi_mpi_send(sendbuf, sendcount, sendtype, root, system_tag, comm); } else { - sendsize = smpi_datatype_size(sendtype); - recvsize = smpi_datatype_size(recvtype); + // FIXME: check for errors + smpi_datatype_extent(recvtype, &lb, &recvext); // Local copy from root - memcpy(&((char*)recvbuf)[root * recvcount * recvsize], sendbuf, sendcount * sendsize * sizeof(char)); + smpi_datatype_copy(sendbuf, sendcount, sendtype, + (char *)recvbuf + root * recvcount * recvext, recvcount, recvtype); // Receive buffers from senders requests = xbt_new(MPI_Request, size - 1); index = 0; for(src = 0; src < size; src++) { if(src != root) { - requests[index] = smpi_irecv_init(&((char*)recvbuf)[src * recvcount * recvsize], recvcount, recvtype, src, system_tag, comm); + requests[index] = smpi_irecv_init((char *)recvbuf + src * recvcount * recvext, + recvcount, recvtype, + src, system_tag, comm); index++; } } @@ -356,10 +663,14 @@ void smpi_mpi_gather(void* sendbuf, int sendcount, MPI_Datatype sendtype, void* } } -void smpi_mpi_gatherv(void* sendbuf, int sendcount, MPI_Datatype sendtype, void* recvbuf, int* recvcounts, int* displs, MPI_Datatype recvtype, int root, MPI_Comm comm) { +void smpi_mpi_gatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, + void *recvbuf, int *recvcounts, int *displs, + MPI_Datatype recvtype, int root, MPI_Comm comm) +{ int system_tag = 666; - int rank, size, src, index, sendsize; - MPI_Request* requests; + int rank, size, src, index; + MPI_Aint lb = 0, recvext = 0; + MPI_Request *requests; rank = smpi_comm_rank(comm); size = smpi_comm_size(comm); @@ -367,15 +678,20 @@ void smpi_mpi_gatherv(void* sendbuf, int sendcount, MPI_Datatype sendtype, void* // Send buffer to root smpi_mpi_send(sendbuf, sendcount, sendtype, root, system_tag, comm); } else { - sendsize = smpi_datatype_size(sendtype); + // FIXME: check for errors + smpi_datatype_extent(recvtype, &lb, &recvext); // Local copy from root - memcpy(&((char*)recvbuf)[displs[root]], sendbuf, sendcount * sendsize * sizeof(char)); + smpi_datatype_copy(sendbuf, sendcount, sendtype, + (char *)recvbuf + displs[root] * recvext, + recvcounts[root], recvtype); // Receive buffers from senders requests = xbt_new(MPI_Request, size - 1); index = 0; for(src = 0; src < size; src++) { if(src != root) { - requests[index] = smpi_irecv_init(&((char*)recvbuf)[displs[src]], recvcounts[src], recvtype, src, system_tag, comm); + requests[index] = + smpi_irecv_init((char *)recvbuf + displs[src] * recvext, + recvcounts[src], recvtype, src, system_tag, comm); index++; } } @@ -386,25 +702,36 @@ void smpi_mpi_gatherv(void* sendbuf, int sendcount, MPI_Datatype sendtype, void* } } -void smpi_mpi_allgather(void* sendbuf, int sendcount, MPI_Datatype sendtype, void* recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm) { +void smpi_mpi_allgather(void *sendbuf, int sendcount, + MPI_Datatype sendtype, void *recvbuf, + int recvcount, MPI_Datatype recvtype, + MPI_Comm comm) +{ int system_tag = 666; - int rank, size, other, index, sendsize, recvsize; - MPI_Request* requests; + int rank, size, other, index; + MPI_Aint lb = 0, recvext = 0; + MPI_Request *requests; rank = smpi_comm_rank(comm); size = smpi_comm_size(comm); - sendsize = smpi_datatype_size(sendtype); - recvsize = smpi_datatype_size(recvtype); + // FIXME: check for errors + smpi_datatype_extent(recvtype, &lb, &recvext); // Local copy from self - memcpy(&((char*)recvbuf)[rank * recvcount * recvsize], sendbuf, sendcount * sendsize * sizeof(char)); + smpi_datatype_copy(sendbuf, sendcount, sendtype, + (char *)recvbuf + rank * recvcount * recvext, recvcount, + recvtype); // Send/Recv buffers to/from others; requests = xbt_new(MPI_Request, 2 * (size - 1)); index = 0; for(other = 0; other < size; other++) { if(other != rank) { - requests[index] = smpi_isend_init(sendbuf, sendcount, sendtype, other, system_tag, comm); + requests[index] = + smpi_isend_init(sendbuf, sendcount, sendtype, other, system_tag, + comm); index++; - requests[index] = smpi_irecv_init(&((char*)recvbuf)[other * recvcount * recvsize], recvcount, recvtype, other, system_tag, comm); + requests[index] = smpi_irecv_init((char *)recvbuf + other * recvcount * recvext, + recvcount, recvtype, other, + system_tag, comm); index++; } } @@ -414,25 +741,36 @@ void smpi_mpi_allgather(void* sendbuf, int sendcount, MPI_Datatype sendtype, voi xbt_free(requests); } -void smpi_mpi_allgatherv(void* sendbuf, int sendcount, MPI_Datatype sendtype, void* recvbuf, int* recvcounts, int* displs, MPI_Datatype recvtype, MPI_Comm comm) { +void smpi_mpi_allgatherv(void *sendbuf, int sendcount, + MPI_Datatype sendtype, void *recvbuf, + int *recvcounts, int *displs, + MPI_Datatype recvtype, MPI_Comm comm) +{ int system_tag = 666; - int rank, size, other, index, sendsize, recvsize; - MPI_Request* requests; + int rank, size, other, index; + MPI_Aint lb = 0, recvext = 0; + MPI_Request *requests; rank = smpi_comm_rank(comm); size = smpi_comm_size(comm); - sendsize = smpi_datatype_size(sendtype); - recvsize = smpi_datatype_size(recvtype); + // FIXME: check for errors + smpi_datatype_extent(recvtype, &lb, &recvext); // Local copy from self - memcpy(&((char*)recvbuf)[displs[rank]], sendbuf, sendcount * sendsize * sizeof(char)); + smpi_datatype_copy(sendbuf, sendcount, sendtype, + (char *)recvbuf + displs[rank] * recvext, + recvcounts[rank], recvtype); // Send buffers to others; requests = xbt_new(MPI_Request, 2 * (size - 1)); index = 0; for(other = 0; other < size; other++) { if(other != rank) { - requests[index] = smpi_isend_init(sendbuf, sendcount, sendtype, other, system_tag, comm); + requests[index] = + smpi_isend_init(sendbuf, sendcount, sendtype, other, system_tag, + comm); index++; - requests[index] = smpi_irecv_init(&((char*)recvbuf)[displs[other]], recvcounts[other], recvtype, other, system_tag, comm); + requests[index] = + smpi_irecv_init((char *)recvbuf + displs[other] * recvext, recvcounts[other], + recvtype, other, system_tag, comm); index++; } } @@ -442,27 +780,35 @@ void smpi_mpi_allgatherv(void* sendbuf, int sendcount, MPI_Datatype sendtype, vo xbt_free(requests); } -void smpi_mpi_scatter(void* sendbuf, int sendcount, MPI_Datatype sendtype, void* recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm) { +void smpi_mpi_scatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, + void *recvbuf, int recvcount, MPI_Datatype recvtype, + int root, MPI_Comm comm) +{ int system_tag = 666; - int rank, size, dst, index, sendsize, recvsize; - MPI_Request* requests; + int rank, size, dst, index; + MPI_Aint lb = 0, sendext = 0; + MPI_Request *requests; rank = smpi_comm_rank(comm); size = smpi_comm_size(comm); if(rank != root) { // Recv buffer from root - smpi_mpi_recv(recvbuf, recvcount, recvtype, root, system_tag, comm, MPI_STATUS_IGNORE); + smpi_mpi_recv(recvbuf, recvcount, recvtype, root, system_tag, comm, + MPI_STATUS_IGNORE); } else { - sendsize = smpi_datatype_size(sendtype); - recvsize = smpi_datatype_size(recvtype); + // FIXME: check for errors + smpi_datatype_extent(sendtype, &lb, &sendext); // Local copy from root - memcpy(recvbuf, &((char*)sendbuf)[root * sendcount * sendsize], recvcount * recvsize * sizeof(char)); + smpi_datatype_copy((char *)sendbuf + root * sendcount * sendext, + sendcount, sendtype, recvbuf, recvcount, recvtype); // Send buffers to receivers requests = xbt_new(MPI_Request, size - 1); index = 0; for(dst = 0; dst < size; dst++) { if(dst != root) { - requests[index] = smpi_isend_init(&((char*)sendbuf)[dst * sendcount * sendsize], sendcount, sendtype, dst, system_tag, comm); + requests[index] = smpi_isend_init((char *)sendbuf + dst * sendcount * sendext, + sendcount, sendtype, dst, + system_tag, comm); index++; } } @@ -473,27 +819,35 @@ void smpi_mpi_scatter(void* sendbuf, int sendcount, MPI_Datatype sendtype, void* } } -void smpi_mpi_scatterv(void* sendbuf, int* sendcounts, int* displs, MPI_Datatype sendtype, void* recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm) { +void smpi_mpi_scatterv(void *sendbuf, int *sendcounts, int *displs, + MPI_Datatype sendtype, void *recvbuf, int recvcount, + MPI_Datatype recvtype, int root, MPI_Comm comm) +{ int system_tag = 666; - int rank, size, dst, index, sendsize, recvsize; - MPI_Request* requests; + int rank, size, dst, index; + MPI_Aint lb = 0, sendext = 0; + MPI_Request *requests; rank = smpi_comm_rank(comm); size = smpi_comm_size(comm); if(rank != root) { // Recv buffer from root - smpi_mpi_recv(recvbuf, recvcount, recvtype, root, system_tag, comm, MPI_STATUS_IGNORE); + smpi_mpi_recv(recvbuf, recvcount, recvtype, root, system_tag, comm, + MPI_STATUS_IGNORE); } else { - sendsize = smpi_datatype_size(sendtype); - recvsize = smpi_datatype_size(recvtype); + // FIXME: check for errors + smpi_datatype_extent(sendtype, &lb, &sendext); // Local copy from root - memcpy(recvbuf, &((char*)sendbuf)[displs[root]], recvcount * recvsize * sizeof(char)); + smpi_datatype_copy((char *)sendbuf + displs[root] * sendext, sendcounts[root], + sendtype, recvbuf, recvcount, recvtype); // Send buffers to receivers requests = xbt_new(MPI_Request, size - 1); index = 0; for(dst = 0; dst < size; dst++) { if(dst != root) { - requests[index] = smpi_isend_init(&((char*)sendbuf)[displs[dst]], sendcounts[dst], sendtype, dst, system_tag, comm); + requests[index] = + smpi_isend_init((char *)sendbuf + displs[dst] * sendext, sendcounts[dst], + sendtype, dst, system_tag, comm); index++; } } @@ -504,11 +858,15 @@ void smpi_mpi_scatterv(void* sendbuf, int* sendcounts, int* displs, MPI_Datatype } } -void smpi_mpi_reduce(void* sendbuf, void* recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm) { +void smpi_mpi_reduce(void *sendbuf, void *recvbuf, int count, + MPI_Datatype datatype, MPI_Op op, int root, + MPI_Comm comm) +{ int system_tag = 666; - int rank, size, src, index, datasize; - MPI_Request* requests; - void** tmpbufs; + int rank, size, src, index; + MPI_Aint lb = 0, dataext = 0; + MPI_Request *requests; + void **tmpbufs; rank = smpi_comm_rank(comm); size = smpi_comm_size(comm); @@ -516,18 +874,24 @@ void smpi_mpi_reduce(void* sendbuf, void* recvbuf, int count, MPI_Datatype datat // Send buffer to root smpi_mpi_send(sendbuf, count, datatype, root, system_tag, comm); } else { - datasize = smpi_datatype_size(datatype); + // FIXME: check for errors + smpi_datatype_extent(datatype, &lb, &dataext); // Local copy from root - memcpy(recvbuf, sendbuf, count * datasize * sizeof(char)); + if (sendbuf && recvbuf) + smpi_datatype_copy(sendbuf, count, datatype, recvbuf, count, datatype); // Receive buffers from senders //TODO: make a MPI_barrier here ? requests = xbt_new(MPI_Request, size - 1); - tmpbufs = xbt_new(void*, size - 1); + tmpbufs = xbt_new(void *, size - 1); index = 0; for(src = 0; src < size; src++) { if(src != root) { - tmpbufs[index] = xbt_malloc(count * datasize); - requests[index] = smpi_irecv_init(tmpbufs[index], count, datatype, src, system_tag, comm); + // FIXME: possibly overkill we we have contiguous/noncontiguous data + // mapping... + tmpbufs[index] = xbt_malloc(count * dataext); + requests[index] = + smpi_irecv_init(tmpbufs[index], count, datatype, src, + system_tag, comm); index++; } } @@ -535,10 +899,12 @@ void smpi_mpi_reduce(void* sendbuf, void* recvbuf, int count, MPI_Datatype datat smpi_mpi_startall(size - 1, requests); for(src = 0; src < size - 1; src++) { index = smpi_mpi_waitany(size - 1, requests, MPI_STATUS_IGNORE); + XBT_DEBUG("finished waiting any request with index %d", index); if(index == MPI_UNDEFINED) { break; } - smpi_op_apply(op, tmpbufs[index], recvbuf, &count, &datatype); + if(op) /* op can be MPI_OP_NULL that does nothing */ + smpi_op_apply(op, tmpbufs[index], recvbuf, &count, &datatype); } for(index = 0; index < size - 1; index++) { xbt_free(tmpbufs[index]); @@ -548,84 +914,52 @@ void smpi_mpi_reduce(void* sendbuf, void* recvbuf, int count, MPI_Datatype datat } } -void smpi_mpi_allreduce(void* sendbuf, void* recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm) { +void smpi_mpi_allreduce(void *sendbuf, void *recvbuf, int count, + MPI_Datatype datatype, MPI_Op op, MPI_Comm comm) +{ smpi_mpi_reduce(sendbuf, recvbuf, count, datatype, op, 0, comm); smpi_mpi_bcast(recvbuf, count, datatype, 0, comm); +} -/* -FIXME: buggy implementation - +void smpi_mpi_scan(void *sendbuf, void *recvbuf, int count, + MPI_Datatype datatype, MPI_Op op, MPI_Comm comm) +{ int system_tag = 666; - int rank, size, other, index, datasize; - MPI_Request* requests; - void** tmpbufs; + int rank, size, other, index; + MPI_Aint lb = 0, dataext = 0; + MPI_Request *requests; + void **tmpbufs; rank = smpi_comm_rank(comm); size = smpi_comm_size(comm); - datasize = smpi_datatype_size(datatype); - // Local copy from self - memcpy(recvbuf, sendbuf, count * datasize * sizeof(char)); - // Send/Recv buffers to/from others; - //TODO: make a MPI_barrier here ? - requests = xbt_new(MPI_Request, 2 * (size - 1)); - tmpbufs = xbt_new(void*, size - 1); - index = 0; - for(other = 0; other < size; other++) { - if(other != rank) { - tmpbufs[index / 2] = xbt_malloc(count * datasize); - requests[index] = smpi_mpi_isend(sendbuf, count, datatype, other, system_tag, comm); - requests[index + 1] = smpi_mpi_irecv(tmpbufs[index / 2], count, datatype, other, system_tag, comm); - index += 2; - } - } - // Wait for completion of all comms. - for(other = 0; other < 2 * (size - 1); other++) { - index = smpi_mpi_waitany(size - 1, requests, MPI_STATUS_IGNORE); - if(index == MPI_UNDEFINED) { - break; - } - if((index & 1) == 1) { - // Request is odd: it's a irecv - smpi_op_apply(op, tmpbufs[index / 2], recvbuf, &count, &datatype); - } - } - for(index = 0; index < size - 1; index++) { - xbt_free(tmpbufs[index]); - } - xbt_free(tmpbufs); - xbt_free(requests); -*/ -} -void smpi_mpi_scan(void* sendbuf, void* recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm) { - int system_tag = 666; - int rank, size, other, index, datasize; - int total; - MPI_Request* requests; - void** tmpbufs; + // FIXME: check for errors + smpi_datatype_extent(datatype, &lb, &dataext); - rank = smpi_comm_rank(comm); - size = smpi_comm_size(comm); - datasize = smpi_datatype_size(datatype); // Local copy from self - memcpy(recvbuf, sendbuf, count * datasize * sizeof(char)); + smpi_datatype_copy(sendbuf, count, datatype, recvbuf, count, datatype); + // Send/Recv buffers to/from others; - total = rank + (size - (rank + 1)); - requests = xbt_new(MPI_Request, total); - tmpbufs = xbt_new(void*, rank); + requests = xbt_new(MPI_Request, size - 1); + tmpbufs = xbt_new(void *, rank); index = 0; for(other = 0; other < rank; other++) { - tmpbufs[index] = xbt_malloc(count * datasize); - requests[index] = smpi_irecv_init(tmpbufs[index], count, datatype, other, system_tag, comm); + // FIXME: possibly overkill we we have contiguous/noncontiguous data + // mapping... + tmpbufs[index] = xbt_malloc(count * dataext); + requests[index] = + smpi_irecv_init(tmpbufs[index], count, datatype, other, system_tag, + comm); index++; } for(other = rank + 1; other < size; other++) { - requests[index] = smpi_isend_init(sendbuf, count, datatype, other, system_tag, comm); + requests[index] = + smpi_isend_init(sendbuf, count, datatype, other, system_tag, comm); index++; } // Wait for completion of all comms. smpi_mpi_startall(size - 1, requests); - for(other = 0; other < total; other++) { + for(other = 0; other < size - 1; other++) { index = smpi_mpi_waitany(size - 1, requests, MPI_STATUS_IGNORE); if(index == MPI_UNDEFINED) { break; @@ -635,7 +969,7 @@ void smpi_mpi_scan(void* sendbuf, void* recvbuf, int count, MPI_Datatype datatyp smpi_op_apply(op, tmpbufs[index], recvbuf, &count, &datatype); } } - for(index = 0; index < size - 1; index++) { + for(index = 0; index < rank; index++) { xbt_free(tmpbufs[index]); } xbt_free(tmpbufs);