X-Git-Url: http://info.iut-bm.univ-fcomte.fr/pub/gitweb/simgrid.git/blobdiff_plain/2d103e931b4e47eb04613d0d038b08f5c0a2d004..6b9a59680b27bbe789336585bd00be1fae84d9a7:/src/smpi/smpi_base.c diff --git a/src/smpi/smpi_base.c b/src/smpi/smpi_base.c index fc093b5417..a016c1dafa 100644 --- a/src/smpi/smpi_base.c +++ b/src/smpi/smpi_base.c @@ -2,42 +2,55 @@ * All rights reserved. */ /* This program is free software; you can redistribute it and/or modify it - * under the terms of the license (GNU LGPL) which comes with this package. */ + * under the terms of the license (GNU LGPL) which comes with this package. */ #include "private.h" -#include "xbt/time.h" +#include "xbt/virtu.h" #include "mc/mc.h" +#include "xbt/replay.h" +#include +#include "simix/smx_private.h" +#include "surf/surf.h" -XBT_LOG_NEW_DEFAULT_SUBCATEGORY(smpi_base, smpi, - "Logging specific to SMPI (base)"); -XBT_LOG_EXTERNAL_CATEGORY(smpi_base); -XBT_LOG_EXTERNAL_CATEGORY(smpi_bench); -XBT_LOG_EXTERNAL_CATEGORY(smpi_kernel); -XBT_LOG_EXTERNAL_CATEGORY(smpi_mpi); -XBT_LOG_EXTERNAL_CATEGORY(smpi_mpi_dt); -XBT_LOG_EXTERNAL_CATEGORY(smpi_coll); -XBT_LOG_EXTERNAL_CATEGORY(smpi_receiver); -XBT_LOG_EXTERNAL_CATEGORY(smpi_sender); -XBT_LOG_EXTERNAL_CATEGORY(smpi_util); - -static int match_recv(void* a, void* b) { + +XBT_LOG_NEW_DEFAULT_SUBCATEGORY(smpi_base, smpi, "Logging specific to SMPI (base)"); + + +static int match_recv(void* a, void* b, smx_action_t ignored) { MPI_Request ref = (MPI_Request)a; MPI_Request req = (MPI_Request)b; - - xbt_assert(ref, "Cannot match recv against null reference"); - xbt_assert(req, "Cannot match recv against null request"); - return (ref->src == MPI_ANY_SOURCE || req->src == ref->src) - && (ref->tag == MPI_ANY_TAG || req->tag == ref->tag); + XBT_DEBUG("Trying to match a recv of src %d against %d, tag %d against %d",ref->src,req->src, ref->tag, req->tag); + + xbt_assert(ref, "Cannot match recv against null reference"); + xbt_assert(req, "Cannot match recv against null request"); + if((ref->src == MPI_ANY_SOURCE || req->src == ref->src) + && (ref->tag == MPI_ANY_TAG || req->tag == ref->tag)){ + //we match, we can transfer some values + // FIXME : move this to the copy function ? + if(ref->src == MPI_ANY_SOURCE)ref->real_src = req->src; + if(ref->tag == MPI_ANY_TAG)ref->real_tag = req->tag; + if(ref->real_size < req->real_size) ref->truncated = 1; + else ref->truncated = 0; + return 1; + }else return 0; } -static int match_send(void* a, void* b) { +static int match_send(void* a, void* b,smx_action_t ignored) { MPI_Request ref = (MPI_Request)a; MPI_Request req = (MPI_Request)b; - + XBT_DEBUG("Trying to match a send of src %d against %d, tag %d against %d",ref->src,req->src, ref->tag, req->tag); xbt_assert(ref, "Cannot match send against null reference"); xbt_assert(req, "Cannot match send against null request"); - return (req->src == MPI_ANY_SOURCE || req->src == ref->src) - && (req->tag == MPI_ANY_TAG || req->tag == ref->tag); + + if((req->src == MPI_ANY_SOURCE || req->src == ref->src) + && (req->tag == MPI_ANY_TAG || req->tag == ref->tag)) + { + if(req->src == MPI_ANY_SOURCE)req->real_src = ref->src; + if(req->tag == MPI_ANY_TAG)req->real_tag = ref->tag; + if(req->real_size < ref->real_size) req->truncated = 1; + else ref->truncated = 0; + return 1; + } else return 0; } static MPI_Request build_request(void *buf, int count, @@ -46,9 +59,27 @@ static MPI_Request build_request(void *buf, int count, { MPI_Request request; + void *old_buf = NULL; + request = xbt_new(s_smpi_mpi_request_t, 1); + + s_smpi_subtype_t *subtype = datatype->substruct; + + if(datatype->has_subtype == 1){ + // This part handles the problem of non-contiguous memory + old_buf = buf; + buf = malloc(count*smpi_datatype_size(datatype)); + if (flags & SEND) { + subtype->serialize(old_buf, buf, count, datatype->substruct); + } + } + request->buf = buf; - // FIXME: this will have to be changed to support non-contiguous datatypes + // This part handles the problem of non-contiguous memory (for the + // unserialisation at the reception) + request->old_buf = old_buf; + request->old_type = datatype; + request->size = smpi_datatype_size(datatype) * count; request->src = src; request->dst = dst; @@ -56,6 +87,7 @@ static MPI_Request build_request(void *buf, int count, request->comm = comm; request->action = NULL; request->flags = flags; + request->detached = 0; #ifdef HAVE_TRACING request->send = 0; request->recv = 0; @@ -63,13 +95,57 @@ static MPI_Request build_request(void *buf, int count, return request; } + +void smpi_empty_status(MPI_Status * status) { + if(status != MPI_STATUS_IGNORE) { + status->MPI_SOURCE=MPI_ANY_SOURCE; + status->MPI_TAG=MPI_ANY_TAG; + status->count=0; + } +} + +void smpi_action_trace_run(char *path) +{ + char *name; + xbt_dynar_t todo; + xbt_dict_cursor_t cursor; + + action_fp=NULL; + if (path) { + action_fp = fopen(path, "r"); + xbt_assert(action_fp != NULL, "Cannot open %s: %s", path, + strerror(errno)); + } + + if (!xbt_dict_is_empty(action_queues)) { + XBT_WARN + ("Not all actions got consumed. If the simulation ended successfully (without deadlock), you may want to add new processes to your deployment file."); + + + xbt_dict_foreach(action_queues, cursor, name, todo) { + XBT_WARN("Still %lu actions for %s", xbt_dynar_length(todo), name); + } + } + + if (path) + fclose(action_fp); + xbt_dict_free(&action_queues); + action_queues = xbt_dict_new_homogeneous(NULL); +} + +static void smpi_mpi_request_free_voidp(void* request) +{ + MPI_Request req = request; + smpi_mpi_request_free(&req); +} + /* MPI Low level calls */ MPI_Request smpi_mpi_send_init(void *buf, int count, MPI_Datatype datatype, int dst, int tag, MPI_Comm comm) { MPI_Request request = - build_request(buf, count, datatype, smpi_comm_rank(comm), dst, tag, - comm, PERSISTENT | SEND); + build_request(buf, count, datatype, smpi_comm_rank(comm), dst, tag, + comm, PERSISTENT | SEND); return request; } @@ -78,8 +154,8 @@ MPI_Request smpi_mpi_recv_init(void *buf, int count, MPI_Datatype datatype, int src, int tag, MPI_Comm comm) { MPI_Request request = - build_request(buf, count, datatype, src, smpi_comm_rank(comm), tag, - comm, PERSISTENT | RECV); + build_request(buf, count, datatype, src, smpi_comm_rank(comm), tag, + comm, PERSISTENT | RECV); return request; } @@ -89,33 +165,69 @@ void smpi_mpi_start(MPI_Request request) smx_rdv_t mailbox; xbt_assert(!request->action, - "Cannot (re)start a non-finished communication"); + "Cannot (re)start a non-finished communication"); if(request->flags & RECV) { print_request("New recv", request); - mailbox = smpi_process_mailbox(); - // FIXME: SIMIX does not yet support non-contiguous datatypes - request->action = SIMIX_req_comm_irecv(mailbox, request->buf, &request->size, &match_recv, request); + if (request->size < surf_cfg_get_int("smpi/async_small_thres")) + mailbox = smpi_process_mailbox_small(); + else + mailbox = smpi_process_mailbox(); + // we make a copy here, as the size is modified by simix, and we may reuse the request in another receive later + request->real_size=request->size; + request->action = simcall_comm_irecv(mailbox, request->buf, &request->real_size, &match_recv, request); + if (request->action)request->action->comm.refcount++; } else { + + int receiver = smpi_group_index(smpi_comm_group(request->comm), request->dst); +/* if(receiver == MPI_UNDEFINED) {*/ +/* XBT_WARN("Trying to send a message to a wrong rank");*/ +/* return;*/ +/* }*/ print_request("New send", request); - mailbox = smpi_process_remote_mailbox( - smpi_group_index(smpi_comm_group(request->comm), request->dst)); - // FIXME: SIMIX does not yet support non-contiguous datatypes - - request->action = - SIMIX_req_comm_isend(mailbox, request->size, -1.0, - request->buf, request->size, &match_send, request, - // detach if msg size < eager/rdv switch limit - request->size < 64*1024 ? 1:0); - // if detached request->action == NULL + if (request->size < surf_cfg_get_int("smpi/async_small_thres")) { // eager mode + mailbox = smpi_process_remote_mailbox_small(receiver); + }else{ + XBT_DEBUG("Send request %p is not in the permanent receive mailbox (buf: %p)",request,request->buf); + mailbox = smpi_process_remote_mailbox(receiver); + } + if (request->size < 64*1024 ) { //(FIXME: this limit should be configurable) + void *oldbuf = NULL; + if(request->old_type->has_subtype == 0){ + oldbuf = request->buf; + request->detached = 1; + if (oldbuf){ + request->buf = malloc(request->size); + memcpy(request->buf,oldbuf,request->size); + } + } + XBT_DEBUG("Send request %p is detached; buf %p copied into %p",request,oldbuf,request->buf); + } + // we make a copy here, as the size is modified by simix, and we may reuse the request in another receive later + request->real_size=request->size; + + request->action = + simcall_comm_isend(mailbox, request->size, -1.0, + request->buf, request->real_size, + &match_send, + &smpi_mpi_request_free_voidp, // how to free the userdata if a detached send fails + request, + // detach if msg size < eager/rdv switch limit + request->detached); + if (request->action)request->action->comm.refcount++; + #ifdef HAVE_TRACING - SIMIX_req_set_category (request->action, TRACE_internal_smpi_get_category()); + /* FIXME: detached sends are not traceable (request->action == NULL) */ + if (request->action) + simcall_set_category(request->action, TRACE_internal_smpi_get_category()); #endif + } + } void smpi_mpi_startall(int count, MPI_Request * requests) { - int i; + int i; for(i = 0; i < count; i++) { smpi_mpi_start(requests[i]); @@ -132,8 +244,8 @@ MPI_Request smpi_isend_init(void *buf, int count, MPI_Datatype datatype, int dst, int tag, MPI_Comm comm) { MPI_Request request = - build_request(buf, count, datatype, smpi_comm_rank(comm), dst, tag, - comm, NON_PERSISTENT | SEND); + build_request(buf, count, datatype, smpi_comm_rank(comm), dst, tag, + comm, NON_PERSISTENT | SEND); return request; } @@ -142,7 +254,7 @@ MPI_Request smpi_mpi_isend(void *buf, int count, MPI_Datatype datatype, int dst, int tag, MPI_Comm comm) { MPI_Request request = - smpi_isend_init(buf, count, datatype, dst, tag, comm); + smpi_isend_init(buf, count, datatype, dst, tag, comm); smpi_mpi_start(request); return request; @@ -152,9 +264,8 @@ MPI_Request smpi_irecv_init(void *buf, int count, MPI_Datatype datatype, int src, int tag, MPI_Comm comm) { MPI_Request request = - build_request(buf, count, datatype, src, smpi_comm_rank(comm), tag, - comm, NON_PERSISTENT | RECV); - + build_request(buf, count, datatype, src, smpi_comm_rank(comm), tag, + comm, NON_PERSISTENT | RECV); return request; } @@ -162,7 +273,7 @@ MPI_Request smpi_mpi_irecv(void *buf, int count, MPI_Datatype datatype, int src, int tag, MPI_Comm comm) { MPI_Request request = - smpi_irecv_init(buf, count, datatype, src, tag, comm); + smpi_irecv_init(buf, count, datatype, src, tag, comm); smpi_mpi_start(request); return request; @@ -172,18 +283,22 @@ void smpi_mpi_recv(void *buf, int count, MPI_Datatype datatype, int src, int tag, MPI_Comm comm, MPI_Status * status) { MPI_Request request; - request = smpi_mpi_irecv(buf, count, datatype, src, tag, comm); smpi_mpi_wait(&request, status); } + + void smpi_mpi_send(void *buf, int count, MPI_Datatype datatype, int dst, int tag, MPI_Comm comm) { - MPI_Request request; + MPI_Request request = + build_request(buf, count, datatype, smpi_comm_rank(comm), dst, tag, + comm, NON_PERSISTENT | SEND | RECV_DELETE); - request = smpi_mpi_isend(buf, count, datatype, dst, tag, comm); + smpi_mpi_start(request); smpi_mpi_wait(&request, MPI_STATUS_IGNORE); + } void smpi_mpi_sendrecv(void *sendbuf, int sendcount, MPI_Datatype sendtype, @@ -195,9 +310,9 @@ void smpi_mpi_sendrecv(void *sendbuf, int sendcount, MPI_Datatype sendtype, MPI_Status stats[2]; requests[0] = - smpi_isend_init(sendbuf, sendcount, sendtype, dst, sendtag, comm); + smpi_isend_init(sendbuf, sendcount, sendtype, dst, sendtag, comm); requests[1] = - smpi_irecv_init(recvbuf, recvcount, recvtype, src, recvtag, comm); + smpi_irecv_init(recvbuf, recvcount, recvtype, src, recvtag, comm); smpi_mpi_startall(2, requests); smpi_mpi_waitall(2, requests, stats); if(status != MPI_STATUS_IGNORE) { @@ -216,32 +331,90 @@ static void finish_wait(MPI_Request * request, MPI_Status * status) MPI_Request req = *request; if(status != MPI_STATUS_IGNORE) { - status->MPI_SOURCE = req->src; - status->MPI_TAG = req->tag; - status->MPI_ERROR = MPI_SUCCESS; + status->MPI_SOURCE = req->src == MPI_ANY_SOURCE ? req->real_src : req->src; + status->MPI_TAG = req->tag == MPI_ANY_TAG ? req->real_tag : req->tag; + if(req->truncated) + status->MPI_ERROR = MPI_ERR_TRUNCATE; + else status->MPI_ERROR = MPI_SUCCESS ; + // this handles the case were size in receive differs from size in send // FIXME: really this should just contain the count of receive-type blocks, // right? - status->count = req->size; + status->count = req->real_size; } + req = *request; + print_request("Finishing", req); + MPI_Datatype datatype = req->old_type; + + if(datatype->has_subtype == 1){ + // This part handles the problem of non-contignous memory + // the unserialization at the reception + s_smpi_subtype_t *subtype = datatype->substruct; + if(req->flags & RECV) { + subtype->unserialize(req->buf, req->old_buf, req->real_size/smpi_datatype_size(datatype) , datatype->substruct); + } + if(req->detached == 0) free(req->buf); + } + + + if(req->flags & NON_PERSISTENT) { + if(req->flags & RECV && + req->action && + (req->action->state == SIMIX_DONE)) + { + MPI_Request sender_request = (MPI_Request)SIMIX_comm_get_src_data(req->action); + if((sender_request!=MPI_REQUEST_NULL) && + ( sender_request->detached ) && + ( sender_request->flags & RECV_DELETE)) + { + //we are in a receiver's wait from a detached send + //we have to clean the sender's side request here.... but only if done by a send, not an isend + //the request lives senderside for an isend. As detached is currently for send + isend, we use RECV_DELETE to separate them + //FIXME : see if just removing detached status for isend is also good + smpi_mpi_request_free(&sender_request); + } + } + + + if(req->action){ + //if we want to free our request, we have to invalidate it at the other end of the comm + if(req->flags & SEND){ + req->action->comm.src_data=MPI_REQUEST_NULL; + }else{ + req->action->comm.dst_data=MPI_REQUEST_NULL; + } + + smx_action_t temp=req->action; + if(req->action->comm.refcount == 1)req->action = NULL; + SIMIX_comm_destroy(temp); + } + + + smpi_mpi_request_free(request); + + } else { + if(req->action)SIMIX_comm_destroy(req->action); req->action = NULL; } } int smpi_mpi_test(MPI_Request * request, MPI_Status * status) { -int flag; - - if ((*request)->action == NULL) - flag = 1; - else - flag = SIMIX_req_comm_test((*request)->action); - if(flag) { - smpi_mpi_wait(request, status); - } - return flag; + int flag; + + //assume that request is not MPI_REQUEST_NULL (filtered in PMPI_Test or smpi_mpi_testall before) + if ((*request)->action == NULL) + flag = 1; + else + flag = simcall_comm_test((*request)->action); + if(flag) { + finish_wait(request, status); + }else{ + smpi_empty_status(status); + } + return flag; } int smpi_mpi_testany(int count, MPI_Request requests[], int *index, @@ -258,33 +431,112 @@ int smpi_mpi_testany(int count, MPI_Request requests[], int *index, map = xbt_new(int, count); size = 0; for(i = 0; i < count; i++) { - if(requests[i]->action) { + if((requests[i]!=MPI_REQUEST_NULL) && requests[i]->action) { xbt_dynar_push(comms, &requests[i]->action); map[size] = i; size++; } } if(size > 0) { - i = SIMIX_req_comm_testany(comms); - // FIXME: MPI_UNDEFINED or does SIMIX have a return code? - if(i != MPI_UNDEFINED) { + i = simcall_comm_testany(comms); + // not MPI_UNDEFINED, as this is a simix return code + if(i != -1) { *index = map[i]; - smpi_mpi_wait(&requests[*index], status); + finish_wait(&requests[*index], status); flag = 1; } + }else{ + //all requests are null or inactive, return true + flag=1; + smpi_empty_status(status); } xbt_free(map); xbt_dynar_free(&comms); } + + return flag; +} + + +int smpi_mpi_testall(int count, MPI_Request requests[], + MPI_Status status[]) +{ + MPI_Status stat; + MPI_Status *pstat = status == MPI_STATUSES_IGNORE ? MPI_STATUS_IGNORE : &stat; + int flag=1; + int i; + for(i=0; i0){ + mailbox = smpi_process_mailbox_small(); + XBT_DEBUG("trying to probe the perm recv mailbox"); + request->action = simcall_comm_iprobe(mailbox, request->src, request->tag, &match_recv, (void*)request); + } + if (request->action==NULL){ + mailbox = smpi_process_mailbox(); + XBT_DEBUG("trying to probe the other mailbox"); + request->action = simcall_comm_iprobe(mailbox, request->src, request->tag, &match_recv, (void*)request); + } + + if(request->action){ + MPI_Request req = (MPI_Request)SIMIX_comm_get_src_data(request->action); + *flag = 1; + if(status != MPI_STATUS_IGNORE) { + status->MPI_SOURCE = req->src; + status->MPI_TAG = req->tag; + status->MPI_ERROR = MPI_SUCCESS; + status->count = req->real_size; + } + } + else *flag = 0; + smpi_mpi_request_free(&request); + + return; +} + void smpi_mpi_wait(MPI_Request * request, MPI_Status * status) { print_request("Waiting", *request); - if ((*request)->action != NULL ) - SIMIX_req_comm_wait((*request)->action, -1.0); - finish_wait(request, status); + if ((*request)->action != NULL) { // this is not a detached send + simcall_comm_wait((*request)->action, -1.0); + finish_wait(request, status); + } + // FIXME for a detached send, finish_wait is not called: } int smpi_mpi_waitany(int count, MPI_Request requests[], @@ -303,16 +555,17 @@ int smpi_mpi_waitany(int count, MPI_Request requests[], XBT_DEBUG("Wait for one of"); for(i = 0; i < count; i++) { if((requests[i] != MPI_REQUEST_NULL) && (requests[i]->action != NULL)) { - print_request(" ", requests[i]); + print_request("Waiting any ", requests[i]); xbt_dynar_push(comms, &requests[i]->action); map[size] = i; size++; } } if(size > 0) { - i = SIMIX_req_comm_waitany(comms); - // FIXME: MPI_UNDEFINED or does SIMIX have a return code? - if (i != MPI_UNDEFINED) { + i = simcall_comm_waitany(comms); + + // not MPI_UNDEFINED, as this is a simix return code + if (i != -1) { index = map[i]; finish_wait(&requests[index], status); } @@ -320,47 +573,102 @@ int smpi_mpi_waitany(int count, MPI_Request requests[], xbt_free(map); xbt_dynar_free(&comms); } + + if (index==MPI_UNDEFINED) + smpi_empty_status(status); + return index; } -void smpi_mpi_waitall(int count, MPI_Request requests[], +int smpi_mpi_waitall(int count, MPI_Request requests[], MPI_Status status[]) { - int index, c; + int index, c; MPI_Status stat; - MPI_Status *pstat = status == MPI_STATUS_IGNORE ? MPI_STATUS_IGNORE : &stat; - + MPI_Status *pstat = status == MPI_STATUSES_IGNORE ? MPI_STATUS_IGNORE : &stat; + int retvalue=MPI_SUCCESS; + //tag invalid requests in the set for(c = 0; c < count; c++) { - if(MC_IS_ENABLED) { - smpi_mpi_wait(&requests[c], pstat); - index = c; - } else { - index = smpi_mpi_waitany(count, requests, pstat); - if(index == MPI_UNDEFINED) { - break; + if(requests[c]==MPI_REQUEST_NULL || requests[c]->dst == MPI_PROC_NULL ){ + if(status != MPI_STATUSES_IGNORE) + smpi_empty_status(&status[c]); + }else if(requests[c]->src == MPI_PROC_NULL ){ + if(status != MPI_STATUSES_IGNORE) { + smpi_empty_status(&status[c]); + status[c].MPI_SOURCE=MPI_PROC_NULL; } } - if(status != MPI_STATUS_IGNORE) { - memcpy(&status[index], pstat, sizeof(*pstat)); + } + + for(c = 0; c < count; c++) { + if(MC_is_active()) { + smpi_mpi_wait(&requests[c], pstat); + index = c; + } else { + index = smpi_mpi_waitany(count, requests, pstat); + if(index == MPI_UNDEFINED) { + break; + } + if(status != MPI_STATUSES_IGNORE) { + memcpy(&status[index], pstat, sizeof(*pstat)); + if(status[index].MPI_ERROR==MPI_ERR_TRUNCATE)retvalue=MPI_ERR_IN_STATUS; + + } } } + return retvalue; } int smpi_mpi_waitsome(int incount, MPI_Request requests[], int *indices, MPI_Status status[]) { int i, count, index; + MPI_Status stat; + MPI_Status *pstat = status == MPI_STATUSES_IGNORE ? MPI_STATUS_IGNORE : &stat; count = 0; - for(i = 0; i < incount; i++) { - if(smpi_mpi_testany(incount, requests, &index, status)) { - indices[count] = index; - count++; - } + for(i = 0; i < incount; i++) + { + index=smpi_mpi_waitany(incount, requests, pstat); + if(index!=MPI_UNDEFINED){ + indices[count] = index; + count++; + if(status != MPI_STATUSES_IGNORE) { + memcpy(&status[index], pstat, sizeof(*pstat)); + } + }else{ + return MPI_UNDEFINED; + } } return count; } +int smpi_mpi_testsome(int incount, MPI_Request requests[], int *indices, + MPI_Status status[]) +{ + int i, count, count_dead; + MPI_Status stat; + MPI_Status *pstat = status == MPI_STATUSES_IGNORE ? MPI_STATUS_IGNORE : &stat; + + count = 0; + count_dead = 0; + for(i = 0; i < incount; i++) { + if((requests[i] != MPI_REQUEST_NULL)) { + if(smpi_mpi_test(&requests[i], pstat)) { + indices[count] = i; + count++; + if(status != MPI_STATUSES_IGNORE) { + memcpy(&status[i], pstat, sizeof(*pstat)); + } + } + }else{ + count_dead++; + } + } + if(count_dead==incount)return MPI_UNDEFINED; + else return count; +} + void smpi_mpi_bcast(void *buf, int count, MPI_Datatype datatype, int root, MPI_Comm comm) { @@ -392,15 +700,15 @@ void smpi_mpi_gather(void *sendbuf, int sendcount, MPI_Datatype sendtype, // FIXME: check for errors smpi_datatype_extent(recvtype, &lb, &recvext); // Local copy from root - smpi_datatype_copy(sendbuf, sendcount, sendtype, - (char *)recvbuf + root * recvcount * recvext, recvcount, recvtype); + smpi_datatype_copy(sendbuf, sendcount, sendtype, + (char *)recvbuf + root * recvcount * recvext, recvcount, recvtype); // Receive buffers from senders requests = xbt_new(MPI_Request, size - 1); index = 0; for(src = 0; src < size; src++) { if(src != root) { - requests[index] = smpi_irecv_init((char *)recvbuf + src * recvcount * recvext, - recvcount, recvtype, + requests[index] = smpi_irecv_init((char *)recvbuf + src * recvcount * recvext, + recvcount, recvtype, src, system_tag, comm); index++; } @@ -430,8 +738,8 @@ void smpi_mpi_gatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, // FIXME: check for errors smpi_datatype_extent(recvtype, &lb, &recvext); // Local copy from root - smpi_datatype_copy(sendbuf, sendcount, sendtype, - (char *)recvbuf + displs[root] * recvext, + smpi_datatype_copy(sendbuf, sendcount, sendtype, + (char *)recvbuf + displs[root] * recvext, recvcounts[root], recvtype); // Receive buffers from senders requests = xbt_new(MPI_Request, size - 1); @@ -439,8 +747,8 @@ void smpi_mpi_gatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, for(src = 0; src < size; src++) { if(src != root) { requests[index] = - smpi_irecv_init((char *)recvbuf + displs[src] * recvext, - recvcounts[src], recvtype, src, system_tag, comm); + smpi_irecv_init((char *)recvbuf + displs[src] * recvext, + recvcounts[src], recvtype, src, system_tag, comm); index++; } } @@ -466,8 +774,8 @@ void smpi_mpi_allgather(void *sendbuf, int sendcount, // FIXME: check for errors smpi_datatype_extent(recvtype, &lb, &recvext); // Local copy from self - smpi_datatype_copy(sendbuf, sendcount, sendtype, - (char *)recvbuf + rank * recvcount * recvext, recvcount, + smpi_datatype_copy(sendbuf, sendcount, sendtype, + (char *)recvbuf + rank * recvcount * recvext, recvcount, recvtype); // Send/Recv buffers to/from others; requests = xbt_new(MPI_Request, 2 * (size - 1)); @@ -475,11 +783,11 @@ void smpi_mpi_allgather(void *sendbuf, int sendcount, for(other = 0; other < size; other++) { if(other != rank) { requests[index] = - smpi_isend_init(sendbuf, sendcount, sendtype, other, system_tag, - comm); + smpi_isend_init(sendbuf, sendcount, sendtype, other, system_tag, + comm); index++; - requests[index] = smpi_irecv_init((char *)recvbuf + other * recvcount * recvext, - recvcount, recvtype, other, + requests[index] = smpi_irecv_init((char *)recvbuf + other * recvcount * recvext, + recvcount, recvtype, other, system_tag, comm); index++; } @@ -505,8 +813,8 @@ void smpi_mpi_allgatherv(void *sendbuf, int sendcount, // FIXME: check for errors smpi_datatype_extent(recvtype, &lb, &recvext); // Local copy from self - smpi_datatype_copy(sendbuf, sendcount, sendtype, - (char *)recvbuf + displs[rank] * recvext, + smpi_datatype_copy(sendbuf, sendcount, sendtype, + (char *)recvbuf + displs[rank] * recvext, recvcounts[rank], recvtype); // Send buffers to others; requests = xbt_new(MPI_Request, 2 * (size - 1)); @@ -514,12 +822,12 @@ void smpi_mpi_allgatherv(void *sendbuf, int sendcount, for(other = 0; other < size; other++) { if(other != rank) { requests[index] = - smpi_isend_init(sendbuf, sendcount, sendtype, other, system_tag, - comm); + smpi_isend_init(sendbuf, sendcount, sendtype, other, system_tag, + comm); index++; requests[index] = - smpi_irecv_init((char *)recvbuf + displs[other] * recvext, recvcounts[other], - recvtype, other, system_tag, comm); + smpi_irecv_init((char *)recvbuf + displs[other] * recvext, recvcounts[other], + recvtype, other, system_tag, comm); index++; } } @@ -549,13 +857,13 @@ void smpi_mpi_scatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, smpi_datatype_extent(sendtype, &lb, &sendext); // Local copy from root smpi_datatype_copy((char *)sendbuf + root * sendcount * sendext, - sendcount, sendtype, recvbuf, recvcount, recvtype); + sendcount, sendtype, recvbuf, recvcount, recvtype); // Send buffers to receivers requests = xbt_new(MPI_Request, size - 1); index = 0; for(dst = 0; dst < size; dst++) { if(dst != root) { - requests[index] = smpi_isend_init((char *)sendbuf + dst * sendcount * sendext, + requests[index] = smpi_isend_init((char *)sendbuf + dst * sendcount * sendext, sendcount, sendtype, dst, system_tag, comm); index++; @@ -587,7 +895,7 @@ void smpi_mpi_scatterv(void *sendbuf, int *sendcounts, int *displs, // FIXME: check for errors smpi_datatype_extent(sendtype, &lb, &sendext); // Local copy from root - smpi_datatype_copy((char *)sendbuf + displs[root] * sendext, sendcounts[root], + smpi_datatype_copy((char *)sendbuf + displs[root] * sendext, sendcounts[root], sendtype, recvbuf, recvcount, recvtype); // Send buffers to receivers requests = xbt_new(MPI_Request, size - 1); @@ -595,8 +903,8 @@ void smpi_mpi_scatterv(void *sendbuf, int *sendcounts, int *displs, for(dst = 0; dst < size; dst++) { if(dst != root) { requests[index] = - smpi_isend_init((char *)sendbuf + displs[dst] * sendext, sendcounts[dst], - sendtype, dst, system_tag, comm); + smpi_isend_init((char *)sendbuf + displs[dst] * sendext, sendcounts[dst], + sendtype, dst, system_tag, comm); index++; } } @@ -626,7 +934,8 @@ void smpi_mpi_reduce(void *sendbuf, void *recvbuf, int count, // FIXME: check for errors smpi_datatype_extent(datatype, &lb, &dataext); // Local copy from root - smpi_datatype_copy(sendbuf, count, datatype, recvbuf, count, datatype); + if (sendbuf && recvbuf) + smpi_datatype_copy(sendbuf, count, datatype, recvbuf, count, datatype); // Receive buffers from senders //TODO: make a MPI_barrier here ? requests = xbt_new(MPI_Request, size - 1); @@ -638,8 +947,8 @@ void smpi_mpi_reduce(void *sendbuf, void *recvbuf, int count, // mapping... tmpbufs[index] = xbt_malloc(count * dataext); requests[index] = - smpi_irecv_init(tmpbufs[index], count, datatype, src, - system_tag, comm); + smpi_irecv_init(tmpbufs[index], count, datatype, src, + system_tag, comm); index++; } } @@ -647,10 +956,12 @@ void smpi_mpi_reduce(void *sendbuf, void *recvbuf, int count, smpi_mpi_startall(size - 1, requests); for(src = 0; src < size - 1; src++) { index = smpi_mpi_waitany(size - 1, requests, MPI_STATUS_IGNORE); + XBT_DEBUG("finished waiting any request with index %d", index); if(index == MPI_UNDEFINED) { break; } - smpi_op_apply(op, tmpbufs[index], recvbuf, &count, &datatype); + if(op) /* op can be MPI_OP_NULL that does nothing */ + smpi_op_apply(op, tmpbufs[index], recvbuf, &count, &datatype); } for(index = 0; index < size - 1; index++) { xbt_free(tmpbufs[index]); @@ -690,17 +1001,17 @@ void smpi_mpi_scan(void *sendbuf, void *recvbuf, int count, tmpbufs = xbt_new(void *, rank); index = 0; for(other = 0; other < rank; other++) { - // FIXME: possibly overkill we we have contiguous/noncontiguous data + // FIXME: possibly overkill we we have contiguous/noncontiguous data // mapping... tmpbufs[index] = xbt_malloc(count * dataext); requests[index] = - smpi_irecv_init(tmpbufs[index], count, datatype, other, system_tag, - comm); + smpi_irecv_init(tmpbufs[index], count, datatype, other, system_tag, + comm); index++; } for(other = rank + 1; other < size; other++) { requests[index] = - smpi_isend_init(sendbuf, count, datatype, other, system_tag, comm); + smpi_isend_init(sendbuf, count, datatype, other, system_tag, comm); index++; } // Wait for completion of all comms.