-/* $Id$tag */
-
/* smpi_coll.c -- various optimized routing for collectives */
-/* Copyright (c) 2009 Stephane Genaud. */
-/* All rights reserved. */
+/* Copyright (c) 2009-2014. The SimGrid Team.
+ * All rights reserved. */
/* This program is free software; you can redistribute it and/or modify it
- * * under the terms of the license (GNU LGPL) which comes with this package. */
-
+ * under the terms of the license (GNU LGPL) which comes with this package. */
#include <stdio.h>
-#include <stdlib.h>
#include <string.h>
+#include <assert.h>
#include "private.h"
-#include "smpi_coll_private.h"
+#include "colls/colls.h"
+#include "simgrid/sg_config.h"
+
+s_mpi_coll_description_t mpi_coll_gather_description[] = {
+ {"default",
+ "gather default collective",
+ smpi_mpi_gather},
+COLL_GATHERS(COLL_DESCRIPTION, COLL_COMMA),
+ {NULL, NULL, NULL} /* this array must be NULL terminated */
+};
-XBT_LOG_NEW_DEFAULT_SUBCATEGORY(smpi_coll, smpi,
- "Logging specific to SMPI (coll)");
-/* proc_tree taken and translated from P2P-MPI */
+s_mpi_coll_description_t mpi_coll_allgather_description[] = {
+ {"default",
+ "allgather default collective",
+ smpi_mpi_allgather},
+COLL_ALLGATHERS(COLL_DESCRIPTION, COLL_COMMA),
+ {NULL, NULL, NULL} /* this array must be NULL terminated */
+};
+
+s_mpi_coll_description_t mpi_coll_allgatherv_description[] = {
+ {"default",
+ "allgatherv default collective",
+ smpi_mpi_allgatherv},
+COLL_ALLGATHERVS(COLL_DESCRIPTION, COLL_COMMA),
+ {NULL, NULL, NULL} /* this array must be NULL terminated */
+};
+
+s_mpi_coll_description_t mpi_coll_allreduce_description[] = {
+ {"default",
+ "allreduce default collective",
+ smpi_mpi_allreduce},
+COLL_ALLREDUCES(COLL_DESCRIPTION, COLL_COMMA),
+ {NULL, NULL, NULL} /* this array must be NULL terminated */
+};
+
+s_mpi_coll_description_t mpi_coll_reduce_scatter_description[] = {
+ {"default",
+ "reduce_scatter default collective",
+ smpi_mpi_reduce_scatter},
+COLL_REDUCE_SCATTERS(COLL_DESCRIPTION, COLL_COMMA),
+ {NULL, NULL, NULL} /* this array must be NULL terminated */
+};
-struct proc_tree {
- int PROCTREE_A;
- int numChildren;
- int * child;
- int parent;
- int me;
- int root;
- int isRoot;
+s_mpi_coll_description_t mpi_coll_scatter_description[] = {
+ {"default",
+ "scatter default collective",
+ smpi_mpi_scatter},
+COLL_SCATTERS(COLL_DESCRIPTION, COLL_COMMA),
+ {NULL, NULL, NULL} /* this array must be NULL terminated */
};
-typedef struct proc_tree * proc_tree_t;
+s_mpi_coll_description_t mpi_coll_barrier_description[] = {
+ {"default",
+ "barrier default collective",
+ smpi_mpi_barrier},
+COLL_BARRIERS(COLL_DESCRIPTION, COLL_COMMA),
+ {NULL, NULL, NULL} /* this array must be NULL terminated */
+};
+s_mpi_coll_description_t mpi_coll_alltoall_description[] = {
+ {"default",
+ "Ompi alltoall default collective",
+ smpi_coll_tuned_alltoall_ompi2},
+COLL_ALLTOALLS(COLL_DESCRIPTION, COLL_COMMA),
+ {"bruck",
+ "Alltoall Bruck (SG) collective",
+ smpi_coll_tuned_alltoall_bruck},
+ {"basic_linear",
+ "Alltoall basic linear (SG) collective",
+ smpi_coll_tuned_alltoall_basic_linear},
+ {NULL, NULL, NULL} /* this array must be NULL terminated */
+};
+s_mpi_coll_description_t mpi_coll_alltoallv_description[] = {
+ {"default",
+ "Ompi alltoallv default collective",
+ smpi_coll_basic_alltoallv},
+COLL_ALLTOALLVS(COLL_DESCRIPTION, COLL_COMMA),
+ {NULL, NULL, NULL} /* this array must be NULL terminated */
+};
-/* prototypes */
-void build_tree( int index, int extent, proc_tree_t *tree);
-proc_tree_t alloc_tree( int arity );
-void free_tree( proc_tree_t tree);
-void print_tree(proc_tree_t tree);
+s_mpi_coll_description_t mpi_coll_bcast_description[] = {
+ {"default",
+ "bcast default collective",
+ smpi_mpi_bcast},
+COLL_BCASTS(COLL_DESCRIPTION, COLL_COMMA),
+ {NULL, NULL, NULL} /* this array must be NULL terminated */
+};
+s_mpi_coll_description_t mpi_coll_reduce_description[] = {
+ {"default",
+ "reduce default collective",
+ smpi_mpi_reduce},
+COLL_REDUCES(COLL_DESCRIPTION, COLL_COMMA),
+ {NULL, NULL, NULL} /* this array must be NULL terminated */
+};
-/**
- * alloc and init
- **/
-proc_tree_t alloc_tree( int arity ) {
- proc_tree_t tree = malloc(1*sizeof(struct proc_tree));
- int i;
-
- tree->PROCTREE_A = arity;
- tree->isRoot = 0;
- tree->numChildren = 0;
- tree->child = malloc(arity*sizeof(int));
- for (i=0; i < arity; i++) {
- tree->child[i] = -1;
- }
- tree->root = -1;
- tree->parent = -1;
- return( tree );
+/** Displays the long description of all registered models, and quit */
+void coll_help(const char *category, s_mpi_coll_description_t * table)
+{
+ int i;
+ printf("Long description of the %s models accepted by this simulator:\n",
+ category);
+ for (i = 0; table[i].name; i++)
+ printf(" %s: %s\n", table[i].name, table[i].description);
}
-/**
- * free
- **/
-void free_tree( proc_tree_t tree) {
- free (tree->child );
- free(tree);
+int find_coll_description(s_mpi_coll_description_t * table,
+ char *name)
+{
+ int i;
+ char *name_list = NULL;
+ int selector_on=0;
+ if(name==NULL){//no argument provided, use active selector's algorithm
+ name=(char*)sg_cfg_get_string("smpi/coll_selector");
+ selector_on=1;
+ }
+ for (i = 0; table[i].name; i++)
+ if (!strcmp(name, table[i].name)) {
+ return i;
+ }
+
+ if(selector_on){
+ // collective seems not handled by the active selector, try with default one
+ name=(char*)"default";
+ for (i = 0; table[i].name; i++)
+ if (!strcmp(name, table[i].name)) {
+ return i;
+ }
+ }
+ if (!table[0].name)
+ xbt_die("No collective is valid! This is a bug.");
+ name_list = xbt_strdup(table[0].name);
+ for (i = 1; table[i].name; i++) {
+ name_list =
+ xbt_realloc(name_list,
+ strlen(name_list) + strlen(table[i].name) + 3);
+ strcat(name_list, ", ");
+ strcat(name_list, table[i].name);
+ }
+ xbt_die("Collective '%s' is invalid! Valid collectives are: %s.", name, name_list);
+ return -1;
}
+XBT_LOG_NEW_DEFAULT_SUBCATEGORY(smpi_coll, smpi,
+ "Logging specific to SMPI (coll)");
+int (*mpi_coll_gather_fun)(void *, int, MPI_Datatype, void*, int, MPI_Datatype, int root, MPI_Comm);
+int (*mpi_coll_allgather_fun)(void *, int, MPI_Datatype, void*, int, MPI_Datatype, MPI_Comm);
+int (*mpi_coll_allgatherv_fun)(void *, int, MPI_Datatype, void*, int*, int*, MPI_Datatype, MPI_Comm);
+int (*mpi_coll_allreduce_fun)(void *sbuf, void *rbuf, int rcount, MPI_Datatype dtype, MPI_Op op, MPI_Comm comm);
+int (*mpi_coll_alltoall_fun)(void *, int, MPI_Datatype, void*, int, MPI_Datatype, MPI_Comm);
+int (*mpi_coll_alltoallv_fun)(void *, int*, int*, MPI_Datatype, void*, int*, int*, MPI_Datatype, MPI_Comm);
+int (*mpi_coll_bcast_fun)(void *buf, int count, MPI_Datatype datatype, int root, MPI_Comm com);
+int (*mpi_coll_reduce_fun)(void *buf, void *rbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm);
+int (*mpi_coll_reduce_scatter_fun)(void *sbuf, void *rbuf, int *rcounts,MPI_Datatype dtype,MPI_Op op,MPI_Comm comm);
+int (*mpi_coll_scatter_fun)(void *sendbuf, int sendcount, MPI_Datatype sendtype,void *recvbuf, int recvcount, MPI_Datatype recvtype,int root, MPI_Comm comm);
+int (*mpi_coll_barrier_fun)(MPI_Comm comm);
+struct s_proc_tree {
+ int PROCTREE_A;
+ int numChildren;
+ int *child;
+ int parent;
+ int me;
+ int root;
+ int isRoot;
+};
+typedef struct s_proc_tree *proc_tree_t;
/**
- * Build the tree depending on a process rank (index) and the group size (extent)
- * @param index the rank of the calling process
- * @param extent the total number of processes
+ * alloc and init
**/
-void build_tree( int index, int extent, proc_tree_t *tree) {
- int places = (*tree)->PROCTREE_A * index;
- int i;
- int ch;
- int pr;
-
- (*tree)->me = index;
- (*tree)->root = 0 ;
-
- for (i = 1; i <= (*tree)->PROCTREE_A; i++) {
- ++places;
- ch = (*tree)->PROCTREE_A * index + i + (*tree)->root;
- //printf("places %d\n",places);
- ch %= extent;
- if (places < extent) {
- //printf("ch <%d> = <%d>\n",i,ch);
- //printf("adding to the tree at index <%d>\n\n",i-1);
- (*tree)->child[i - 1] = ch;
- (*tree)->numChildren++;
- }
- else {
- //fprintf(stderr,"not adding to the tree\n");
- }
- }
- //fprintf(stderr,"procTree.numChildren <%d>\n",(*tree)->numChildren);
-
- if (index == (*tree)->root) {
- (*tree)->isRoot = 1;
- }
- else {
- (*tree)->isRoot = 0;
- pr = (index - 1) / (*tree)->PROCTREE_A;
- (*tree)->parent = pr;
- }
+static proc_tree_t alloc_tree(int arity)
+{
+ proc_tree_t tree;
+ int i;
+
+ tree = xbt_new(struct s_proc_tree, 1);
+ tree->PROCTREE_A = arity;
+ tree->isRoot = 0;
+ tree->numChildren = 0;
+ tree->child = xbt_new(int, arity);
+ for (i = 0; i < arity; i++) {
+ tree->child[i] = -1;
+ }
+ tree->root = -1;
+ tree->parent = -1;
+ return tree;
}
/**
- * prints the tree as a graphical representation
+ * free
**/
-void print_tree(proc_tree_t tree) {
- int i;
- char *spacer;
- if (-1 != tree->parent ) {
- printf("[%d]\n +---",tree->parent);
- spacer= strdup(" ");
- }
- else {
- spacer=strdup("");
- }
- printf("<%d>\n",tree->me);
- for (i=0;i < tree->numChildren; i++) {
- printf("%s +--- %d\n", spacer,tree->child[i]);
- }
- free(spacer);
+static void free_tree(proc_tree_t tree)
+{
+ xbt_free(tree->child);
+ xbt_free(tree);
}
-
+
/**
- * bcast
+ * Build the tree depending on a process rank (index) and the group size (extent)
+ * @param root the rank of the tree root
+ * @param rank the rank of the calling process
+ * @param size the total number of processes
**/
-int tree_bcast(void *buf, int count, MPI_Datatype datatype, int root, MPI_Comm comm, proc_tree_t tree);
-int tree_bcast( void *buf, int count, MPI_Datatype datatype, int root,
- MPI_Comm comm, proc_tree_t tree)
+static void build_tree(int root, int rank, int size, proc_tree_t * tree)
{
- int system_tag = 999; // used negative int but smpi_create_request() declares this illegal (to be checked)
- int rank;
- int retval = MPI_SUCCESS;
- int i;
- smpi_mpi_request_t request;
- smpi_mpi_request_t * requests;
-
- rank = smpi_mpi_comm_rank(comm);
-
- /* wait for data from my parent in the tree */
- if (!tree->isRoot) {
- DEBUG4("[%d] recv(%d from %d, tag=%d)\n",rank,rank, tree->parent, system_tag+rank);
- retval = smpi_create_request(buf, count, datatype,
- tree->parent, rank,
- system_tag + rank,
- comm, &request);
- if (MPI_SUCCESS != retval) {
- printf("** internal error: smpi_create_request() rank=%d returned retval=%d, %s:%d\n",
- rank,retval,__FILE__,__LINE__);
- }
- smpi_mpi_irecv(request);
- DEBUG2("[%d] waiting on irecv from %d\n",rank , tree->parent);
- smpi_mpi_wait(request, MPI_STATUS_IGNORE);
- xbt_mallocator_release(smpi_global->request_mallocator, request);
- }
-
- requests = xbt_malloc( tree->numChildren * sizeof(smpi_mpi_request_t));
- DEBUG2("[%d] creates %d requests\n",rank,tree->numChildren);
-
- /* iniates sends to ranks lower in the tree */
- for (i=0; i < tree->numChildren; i++) {
- if (tree->child[i] != -1) {
- DEBUG4("[%d] send(%d->%d, tag=%d)\n",rank,rank, tree->child[i], system_tag+tree->child[i]);
- retval = smpi_create_request(buf, count, datatype,
- rank, tree->child[i],
- system_tag + tree->child[i],
- comm, &(requests[i]));
- DEBUG5("[%d] after create req[%d]=%p req->(src=%d,dst=%d)\n",rank,i,requests[i],requests[i]->src,requests[i]->dst );
- if (MPI_SUCCESS != retval) {
- printf("** internal error: smpi_create_request() rank=%d returned retval=%d, %s:%d\n",
- rank,retval,__FILE__,__LINE__);
- }
- smpi_mpi_isend(requests[i]);
- /* FIXME : we should not wait immediately here. See next FIXME. */
- smpi_mpi_wait( requests[i], MPI_STATUS_IGNORE);
- xbt_mallocator_release(smpi_global->request_mallocator, requests[i]);
- }
- }
- /* FIXME : normally, we sould wait only once all isend have been issued:
- * this is the following commented code. It deadlocks, probably because
- * of a bug in the sender process */
-
- /* wait for completion of sends */
- /* printf("[%d] wait for %d send completions\n",rank,tree->numChildren);
- smpi_mpi_waitall( tree->numChildren, requests, MPI_STATUS_IGNORE);
- printf("[%d] reqs completed\n)",rank);
- */
-
- xbt_free(requests);
- return(retval);
- /* checked ok with valgrind --leak-check=full*/
+ int index = (rank - root + size) % size;
+ int firstChildIdx = index * (*tree)->PROCTREE_A + 1;
+ int i;
+
+ (*tree)->me = rank;
+ (*tree)->root = root;
+
+ for (i = 0; i < (*tree)->PROCTREE_A && firstChildIdx + i < size; i++) {
+ (*tree)->child[i] = (firstChildIdx + i + root) % size;
+ (*tree)->numChildren++;
+ }
+ if (rank == root) {
+ (*tree)->isRoot = 1;
+ } else {
+ (*tree)->isRoot = 0;
+ (*tree)->parent = (((index - 1) / (*tree)->PROCTREE_A) + root) % size;
+ }
}
-
/**
- * anti-bcast
+ * bcast
**/
-int tree_antibcast(void *buf, int count, MPI_Datatype datatype, int root, MPI_Comm comm, proc_tree_t tree);
-int tree_antibcast( void *buf, int count, MPI_Datatype datatype, int root,
- MPI_Comm comm, proc_tree_t tree)
+static void tree_bcast(void *buf, int count, MPI_Datatype datatype,
+ MPI_Comm comm, proc_tree_t tree)
{
- int system_tag = 999; // used negative int but smpi_create_request() declares this illegal (to be checked)
- int rank;
- int retval = MPI_SUCCESS;
- int i;
- smpi_mpi_request_t request;
- smpi_mpi_request_t * requests;
-
- rank = smpi_mpi_comm_rank(comm);
-
- //------------------anti-bcast-------------------
-
- // everyone sends to its parent, except root.
- if (!tree->isRoot) {
- retval = smpi_create_request(buf, count, datatype,
- rank,tree->parent,
- system_tag + rank,
- comm, &request);
- if (MPI_SUCCESS != retval) {
- printf("** internal error: smpi_create_request() rank=%d returned retval=%d, %s:%d\n",
- rank,retval,__FILE__,__LINE__);
- }
- smpi_mpi_isend(request);
- smpi_mpi_wait(request, MPI_STATUS_IGNORE);
- xbt_mallocator_release(smpi_global->request_mallocator, request);
- }
-
- //every one receives as many messages as it has children
- requests = xbt_malloc( tree->numChildren * sizeof(smpi_mpi_request_t));
- for (i=0; i < tree->numChildren; i++) {
- if (tree->child[i] != -1) {
- retval = smpi_create_request(buf, count, datatype,
- tree->child[i], rank,
- system_tag + tree->child[i],
- comm, &(requests[i]));
- if (MPI_SUCCESS != retval) {
- printf("** internal error: smpi_create_request() rank=%d returned retval=%d, %s:%d\n",
- rank,retval,__FILE__,__LINE__);
- }
- smpi_mpi_irecv(requests[i]);
- /* FIXME : we should not wait immediately here. See next FIXME. */
- smpi_mpi_wait( requests[i], MPI_STATUS_IGNORE);
- xbt_mallocator_release(smpi_global->request_mallocator, requests[i]);
- }
- }
- xbt_free(requests);
- return(retval);
-
- /* checked ok with valgrind --leak-check=full*/
-}
+ int system_tag = COLL_TAG_BCAST;
+ int rank, i;
+ MPI_Request *requests;
+
+ rank = smpi_comm_rank(comm);
+ /* wait for data from my parent in the tree */
+ if (!tree->isRoot) {
+ XBT_DEBUG("<%d> tree_bcast(): i am not root: recv from %d, tag=%d)",
+ rank, tree->parent, system_tag + rank);
+ smpi_mpi_recv(buf, count, datatype, tree->parent, system_tag + rank,
+ comm, MPI_STATUS_IGNORE);
+ }
+ requests = xbt_new(MPI_Request, tree->numChildren);
+ XBT_DEBUG("<%d> creates %d requests (1 per child)", rank,
+ tree->numChildren);
+ /* iniates sends to ranks lower in the tree */
+ for (i = 0; i < tree->numChildren; i++) {
+ if (tree->child[i] == -1) {
+ requests[i] = MPI_REQUEST_NULL;
+ } else {
+ XBT_DEBUG("<%d> send to <%d>, tag=%d", rank, tree->child[i],
+ system_tag + tree->child[i]);
+ requests[i] =
+ smpi_isend_init(buf, count, datatype, tree->child[i],
+ system_tag + tree->child[i], comm);
+ }
+ }
+ smpi_mpi_startall(tree->numChildren, requests);
+ smpi_mpi_waitall(tree->numChildren, requests, MPI_STATUS_IGNORE);
+ for(i = 0; i < tree->numChildren; i++) {
+ if(requests[i]!=MPI_REQUEST_NULL) smpi_mpi_request_free(&requests[i]);
+ }
+ xbt_free(requests);
+}
/**
- * bcast with a binary, ternary, or whatever tree ..
+ * anti-bcast
**/
-int nary_tree_bcast(void *buf, int count, MPI_Datatype datatype, int root,
- MPI_Comm comm, int arity)
+static void tree_antibcast(void *buf, int count, MPI_Datatype datatype,
+ MPI_Comm comm, proc_tree_t tree)
{
-int rank;
-int retval;
-
- rank = smpi_mpi_comm_rank( comm );
- // arity=2: a binary tree, arity=4 seem to be a good setting (see P2P-MPI))
- proc_tree_t tree = alloc_tree( arity );
- build_tree( rank, comm->size, &tree );
-
- retval = tree_bcast( buf, count, datatype, root, comm, tree );
-
- free_tree( tree );
- return( retval );
+ int system_tag = COLL_TAG_BCAST;
+ int rank, i;
+ MPI_Request *requests;
+
+ rank = smpi_comm_rank(comm);
+ // everyone sends to its parent, except root.
+ if (!tree->isRoot) {
+ XBT_DEBUG("<%d> tree_antibcast(): i am not root: send to %d, tag=%d)",
+ rank, tree->parent, system_tag + rank);
+ smpi_mpi_send(buf, count, datatype, tree->parent, system_tag + rank,
+ comm);
+ }
+ //every one receives as many messages as it has children
+ requests = xbt_new(MPI_Request, tree->numChildren);
+ XBT_DEBUG("<%d> creates %d requests (1 per child)", rank,
+ tree->numChildren);
+ for (i = 0; i < tree->numChildren; i++) {
+ if (tree->child[i] == -1) {
+ requests[i] = MPI_REQUEST_NULL;
+ } else {
+ XBT_DEBUG("<%d> recv from <%d>, tag=%d", rank, tree->child[i],
+ system_tag + tree->child[i]);
+ requests[i] =
+ smpi_irecv_init(buf, count, datatype, tree->child[i],
+ system_tag + tree->child[i], comm);
+ }
+ }
+ smpi_mpi_startall(tree->numChildren, requests);
+ smpi_mpi_waitall(tree->numChildren, requests, MPI_STATUS_IGNORE);
+ for(i = 0; i < tree->numChildren; i++) {
+ if(requests[i]!=MPI_REQUEST_NULL) smpi_mpi_request_free(&requests[i]);
+ }
+ xbt_free(requests);
}
-
/**
- * Barrier
+ * bcast with a binary, ternary, or whatever tree ..
**/
-int nary_tree_barrier( MPI_Comm comm , int arity)
+void nary_tree_bcast(void *buf, int count, MPI_Datatype datatype, int root,
+ MPI_Comm comm, int arity)
{
- int rank;
- int retval = MPI_SUCCESS;
- char dummy='$';
-
- rank = smpi_mpi_comm_rank(comm);
- // arity=2: a binary tree, arity=4 seem to be a good setting (see P2P-MPI))
- proc_tree_t tree = alloc_tree( arity );
-
- build_tree( rank, comm->size, &tree );
-
- retval = tree_antibcast( &dummy, 1, MPI_CHAR, 0, comm, tree);
- if (MPI_SUCCESS != retval) {
- printf("[%s:%d] ** Error: tree_antibcast() returned retval=%d\n",__FILE__,__LINE__,retval);
- }
- else {
- retval = tree_bcast(&dummy, 1, MPI_CHAR, 0, comm, tree);
- }
-
- free_tree( tree );
- return(retval);
-
- /* checked ok with valgrind --leak-check=full*/
+ proc_tree_t tree = alloc_tree(arity);
+ int rank, size;
+
+ rank = smpi_comm_rank(comm);
+ size = smpi_comm_size(comm);
+ build_tree(root, rank, size, &tree);
+ tree_bcast(buf, count, datatype, comm, tree);
+ free_tree(tree);
}
-
/**
- * Alltoall pairwise
- *
- * this algorithm performs size steps (1<=s<=size) and
- * at each step s, a process p sends iand receive to.from a unique distinct remote process
- * size=5 : s=1: 4->0->1, 0->1->2, 1->2->3, ...
- * s=2: 3->0->2, 4->1->3, 0->2->4, 1->3->0 , 2->4->1
- * ....
- * Openmpi calls this routine when the message size sent to each rank is greater than 3000 bytes
+ * barrier with a binary, ternary, or whatever tree ..
**/
-
-int smpi_coll_tuned_alltoall_pairwise (void *sendbuf, int sendcount, MPI_Datatype datatype,
- void* recvbuf, int recvcount, MPI_Datatype recvdatatype, MPI_Comm comm)
+void nary_tree_barrier(MPI_Comm comm, int arity)
{
- int retval = MPI_SUCCESS;
- int rank;
- int size = comm->size;
- int step;
- int sendto, recvfrom;
- int tag_alltoall=999;
- void * tmpsend, *tmprecv;
-
- rank = smpi_mpi_comm_rank(comm);
- INFO1("[%d] algorithm alltoall_pairwise() called.\n",rank);
-
-
- /* Perform pairwise exchange - starting from 1 so the local copy is last */
- for (step = 1; step < size+1; step++) {
-
- /* who do we talk to in this step? */
- sendto = (rank+step)%size;
- recvfrom = (rank+size-step)%size;
-
- /* where from are we sending and where from are we receiving actual data ? */
- tmpsend = (char*)sendbuf+sendto*datatype->size*sendcount;
- tmprecv = (char*)recvbuf+recvfrom*recvdatatype->size*recvcount;
-
- /* send and receive */
- /* in OpenMPI, they use :
- err = ompi_coll_tuned_sendrecv( tmpsend, scount, sdtype, sendto, MCA_COLL_BASE_TAG_ALLTOALL,
- tmprecv, rcount, rdtype, recvfrom, MCA_COLL_BASE_TAG_ALLTOALL,
- comm, MPI_STATUS_IGNORE, rank);
- */
- retval = MPI_Sendrecv(tmpsend, sendcount, datatype, sendto, tag_alltoall,
- tmprecv, recvcount, recvdatatype, recvfrom, tag_alltoall,
- comm, MPI_STATUS_IGNORE);
- }
- return(retval);
+ proc_tree_t tree = alloc_tree(arity);
+ int rank, size;
+ char dummy = '$';
+
+ rank = smpi_comm_rank(comm);
+ size = smpi_comm_size(comm);
+ build_tree(0, rank, size, &tree);
+ tree_antibcast(&dummy, 1, MPI_CHAR, comm, tree);
+ tree_bcast(&dummy, 1, MPI_CHAR, comm, tree);
+ free_tree(tree);
}
-/**
- * helper: copy a datatype into another (in the simple case dt1=dt2)
-**/
-int copy_dt( void *sbuf, int scount, const MPI_Datatype sdtype, void *rbuf, int rcount, const MPI_Datatype rdtype);
-int copy_dt( void *sbuf, int scount, const MPI_Datatype sdtype,
- void *rbuf, int rcount, const MPI_Datatype rdtype)
+int smpi_coll_tuned_alltoall_ompi2(void *sendbuf, int sendcount,
+ MPI_Datatype sendtype, void *recvbuf,
+ int recvcount, MPI_Datatype recvtype,
+ MPI_Comm comm)
{
- /* First check if we really have something to do */
- if (0 == rcount) {
- return ((0 == scount) ? MPI_SUCCESS : MPI_ERR_TRUNCATE);
- }
- /* If same datatypes used, just copy. */
- if (sdtype == rdtype) {
- int count = ( scount < rcount ? scount : rcount );
- memcpy( rbuf, sbuf, sdtype->size*count);
- return ((scount > rcount) ? MPI_ERR_TRUNCATE : MPI_SUCCESS);
- }
- /* FIXME: cases
- * - If receive packed.
- * - If send packed
- * to be treated once we have the MPI_Pack things ...
- **/
- return( MPI_SUCCESS );
+ int size, sendsize;
+ size = smpi_comm_size(comm);
+ sendsize = smpi_datatype_size(sendtype) * sendcount;
+ if (sendsize < 200 && size > 12) {
+ return
+ smpi_coll_tuned_alltoall_bruck(sendbuf, sendcount, sendtype,
+ recvbuf, recvcount, recvtype,
+ comm);
+ } else if (sendsize < 3000) {
+ return
+ smpi_coll_tuned_alltoall_basic_linear(sendbuf, sendcount,
+ sendtype, recvbuf,
+ recvcount, recvtype, comm);
+ } else {
+ return
+ smpi_coll_tuned_alltoall_ring(sendbuf, sendcount, sendtype,
+ recvbuf, recvcount, recvtype,
+ comm);
+ }
}
/**
+ * Alltoall Bruck
*
+ * Openmpi calls this routine when the message size sent to each rank < 2000 bytes and size < 12
+ * FIXME: uh, check smpi_pmpi again, but this routine is called for > 12, not
+ * less...
**/
-int smpi_coll_tuned_alltoall_basic_linear(void *sbuf, int scount, MPI_Datatype sdtype,
- void* rbuf, int rcount, MPI_Datatype rdtype, MPI_Comm comm)
+int smpi_coll_tuned_alltoall_bruck(void *sendbuf, int sendcount,
+ MPI_Datatype sendtype, void *recvbuf,
+ int recvcount, MPI_Datatype recvtype,
+ MPI_Comm comm)
{
- int i;
- int system_alltoall_tag = 888;
- int rank;
- int size = comm->size;
- int err;
- char *psnd;
- char *prcv;
- int nreq = 0;
- MPI_Aint lb;
- MPI_Aint sndinc;
- MPI_Aint rcvinc;
- MPI_Request *reqs;
-
- /* Initialize. */
- rank = smpi_mpi_comm_rank(comm);
- INFO1("[%d] algorithm alltoall_basic_linear() called.\n",rank);
-
- err = smpi_mpi_type_get_extent(sdtype, &lb, &sndinc);
- err = smpi_mpi_type_get_extent(rdtype, &lb, &rcvinc);
- /* simple optimization */
- psnd = ((char *) sbuf) + (rank * sndinc);
- prcv = ((char *) rbuf) + (rank * rcvinc);
-
- err = copy_dt( psnd, scount, sdtype, prcv, rcount, rdtype );
- if (MPI_SUCCESS != err) {
- return err;
- }
-
- /* If only one process, we're done. */
- if (1 == size) {
- return MPI_SUCCESS;
- }
-
- /* Initiate all send/recv to/from others. */
- reqs = xbt_malloc(2*(size-1) * sizeof(smpi_mpi_request_t));
-
- prcv = (char *) rbuf;
- psnd = (char *) sbuf;
-
- /* Post all receives first -- a simple optimization */
- for (i = (rank + 1) % size; i != rank; i = (i + 1) % size) {
- err = smpi_create_request( prcv + (i * rcvinc), rcount, rdtype,
- i, rank,
- system_alltoall_tag,
- comm, &(reqs[nreq]));
- if (MPI_SUCCESS != err) {
- DEBUG2("[%d] failed to create request for rank %d\n",rank,i);
- for (i=0;i< nreq;i++)
- xbt_mallocator_release(smpi_global->request_mallocator, reqs[i]);
- return err;
- }
- nreq++;
- }
- /* Now post all sends in reverse order
- * - We would like to minimize the search time through message queue
- * when messages actually arrive in the order in which they were posted.
- * */
- for (i = (rank + size - 1) % size; i != rank; i = (i + size - 1) % size ) {
- err = smpi_create_request (psnd + (i * sndinc), scount, sdtype,
- rank, i,
- system_alltoall_tag,
- comm, &(reqs[nreq]));
- if (MPI_SUCCESS != err) {
- DEBUG2("[%d] failed to create request for rank %d\n",rank,i);
- for (i=0;i< nreq;i++)
- xbt_mallocator_release(smpi_global->request_mallocator, reqs[i]);
- return err;
- }
- nreq++;
- }
-
- /* Start your engines. This will never return an error. */
- for ( i=0; i< nreq/2; i++ ) {
- smpi_mpi_irecv( reqs[i] );
- }
- for ( i= nreq/2; i<nreq; i++ ) {
- smpi_mpi_isend( reqs[i] );
- }
-
-
- /* Wait for them all. If there's an error, note that we don't
- * care what the error was -- just that there *was* an error. The
- * PML will finish all requests, even if one or more of them fail.
- * i.e., by the end of this call, all the requests are free-able.
- * So free them anyway -- even if there was an error, and return
- * the error after we free everything. */
-
- err = smpi_mpi_waitall(nreq, reqs, MPI_STATUS_IGNORE);
-
- /* Free the reqs */
- for (i=0;i< 2*(size-1);i++) {
- xbt_mallocator_release(smpi_global->request_mallocator, reqs[i]);
- }
- return err;
+ int system_tag = 777;
+ int i, rank, size, err, count;
+ MPI_Aint lb;
+ MPI_Aint sendext = 0;
+ MPI_Aint recvext = 0;
+ MPI_Request *requests;
+
+ // FIXME: check implementation
+ rank = smpi_comm_rank(comm);
+ size = smpi_comm_size(comm);
+ XBT_DEBUG("<%d> algorithm alltoall_bruck() called.", rank);
+ smpi_datatype_extent(sendtype, &lb, &sendext);
+ smpi_datatype_extent(recvtype, &lb, &recvext);
+ /* Local copy from self */
+ err =
+ smpi_datatype_copy((char *)sendbuf + rank * sendcount * sendext,
+ sendcount, sendtype,
+ (char *)recvbuf + rank * recvcount * recvext,
+ recvcount, recvtype);
+ if (err == MPI_SUCCESS && size > 1) {
+ /* Initiate all send/recv to/from others. */
+ requests = xbt_new(MPI_Request, 2 * (size - 1));
+ count = 0;
+ /* Create all receives that will be posted first */
+ for (i = 0; i < size; ++i) {
+ if (i == rank) {
+ XBT_DEBUG("<%d> skip request creation [src = %d, recvcount = %d]",
+ rank, i, recvcount);
+ continue;
+ }
+ requests[count] =
+ smpi_irecv_init((char *)recvbuf + i * recvcount * recvext, recvcount,
+ recvtype, i, system_tag, comm);
+ count++;
+ }
+ /* Now create all sends */
+ for (i = 0; i < size; ++i) {
+ if (i == rank) {
+ XBT_DEBUG("<%d> skip request creation [dst = %d, sendcount = %d]",
+ rank, i, sendcount);
+ continue;
+ }
+ requests[count] =
+ smpi_isend_init((char *)sendbuf + i * sendcount * sendext, sendcount,
+ sendtype, i, system_tag, comm);
+ count++;
+ }
+ /* Wait for them all. */
+ smpi_mpi_startall(count, requests);
+ XBT_DEBUG("<%d> wait for %d requests", rank, count);
+ smpi_mpi_waitall(count, requests, MPI_STATUS_IGNORE);
+ for(i = 0; i < count; i++) {
+ if(requests[i]!=MPI_REQUEST_NULL) smpi_mpi_request_free(&requests[i]);
+ }
+ xbt_free(requests);
+ }
+ return MPI_SUCCESS;
}
-
/**
- * Alltoall Bruck
- *
- * Openmpi calls this routine when the message size sent to each rank < 2000 bytes and size < 12
+ * Alltoall basic_linear (STARMPI:alltoall-simple)
**/
-
-
-int smpi_coll_tuned_alltoall_bruck(void *sendbuf, int sendcount, MPI_Datatype sdtype,
- void* recvbuf, int recvcount, MPI_Datatype rdtype, MPI_Comm comm)
+int smpi_coll_tuned_alltoall_basic_linear(void *sendbuf, int sendcount,
+ MPI_Datatype sendtype,
+ void *recvbuf, int recvcount,
+ MPI_Datatype recvtype,
+ MPI_Comm comm)
{
-/* int size = comm->size;
- int i, k, line = -1;
- int sendto, recvfrom, distance, *displs=NULL, *blen=NULL;
- int maxpacksize, packsize, position;
- char * tmpbuf=NULL, *packbuf=NULL;
- ptrdiff_t lb, sext, rext;
- int err = 0;
- int weallocated = 0;
- MPI_Datatype iddt;
-
- rank = smpi_mpi_comm_rank(comm);
-*/
- INFO0("coll:tuned:alltoall_intra_bruck ** NOT IMPLEMENTED YET**");
-/*
- displs = xbt_malloc(size*sizeof(int));
- blen = xbt_malloc(size*sizeof(int));
-
- weallocated = 1;
-*/
- /* Prepare for packing data */
-/*
- err = MPI_Pack_size( scount*size, sdtype, comm, &maxpacksize );
- if (err != MPI_SUCCESS) { }
-*/
- /* pack buffer allocation */
-/* packbuf = (char*) malloc((unsigned) maxpacksize);
- if (packbuf == NULL) { }
-*/
- /* tmp buffer allocation for message data */
-/* tmpbuf = xbt_malloc(scount*size*sext);
- if (tmpbuf == NULL) { }
-*/
-
- /* Step 1 - local rotation - shift up by rank */
-/* err = ompi_ddt_copy_content_same_ddt (sdtype, (int32_t) ((size-rank)*scount),
- tmpbuf, ((char*)sbuf)+rank*scount*sext);
- if (err<0) {
- line = __LINE__; err = -1; goto err_hndl;
- }
-
- if (rank != 0) {
- err = ompi_ddt_copy_content_same_ddt (sdtype, (int32_t) (rank*scount),
- tmpbuf+(size-rank)*scount*sext, (char*)sbuf);
- if (err<0) {
- line = __LINE__; err = -1; goto err_hndl;
- }
- }
-*/
- /* perform communication step */
-/* for (distance = 1; distance < size; distance<<=1) {
-*/
- /* send data to "sendto" */
-/* sendto = (rank+distance)%size;
- recvfrom = (rank-distance+size)%size;
- packsize = 0;
- k = 0;
-*/
- /* create indexed datatype */
-// for (i = 1; i < size; i++) {
-// if ((i&distance) == distance) {
-// displs[k] = i*scount; blen[k] = scount;
-// k++;
-// }
-// }
- /* Set indexes and displacements */
-// err = MPI_Type_indexed(k, blen, displs, sdtype, &iddt);
-// if (err != MPI_SUCCESS) { line = __LINE__; goto err_hndl; }
-// /* Commit the new datatype */
-/// err = MPI_Type_commit(&iddt);
-// if (err != MPI_SUCCESS) { line = __LINE__; goto err_hndl; }
-
- /* have the new distribution ddt, pack and exchange data */
-// err = MPI_Pack(tmpbuf, 1, iddt, packbuf, maxpacksize, &packsize, comm);
-// if (err != MPI_SUCCESS) { line = __LINE__; goto err_hndl; }
-
- /* Sendreceive */
-// err = ompi_coll_tuned_sendrecv ( packbuf, packsize, MPI_PACKED, sendto,
-// MCA_COLL_BASE_TAG_ALLTOALL,
-// rbuf, packsize, MPI_PACKED, recvfrom,
-// MCA_COLL_BASE_TAG_ALLTOALL,
-// comm, MPI_STATUS_IGNORE, rank);
-// if (err != MPI_SUCCESS) { line = __LINE__; goto err_hndl; }
-
- /* Unpack data from rbuf to tmpbuf */
-// position = 0;
-// err = MPI_Unpack(rbuf, packsize, &position,
-// tmpbuf, 1, iddt, comm);
-// if (err != MPI_SUCCESS) { line = __LINE__; goto err_hndl; }
-
- /* free ddt */
-// err = MPI_Type_free(&iddt);
-// if (err != MPI_SUCCESS) { line = __LINE__; goto err_hndl; }
-// } /* end of for (distance = 1... */
-
- /* Step 3 - local rotation - */
-// for (i = 0; i < size; i++) {
-
-// err = ompi_ddt_copy_content_same_ddt (rdtype, (int32_t) rcount,
-// ((char*)rbuf)+(((rank-i+size)%size)*rcount*rext),
-// tmpbuf+i*rcount*rext);
-//
-// if (err<0) {
-// line = __LINE__; err = -1; goto err_hndl;
-// }
-// }
-
- /* Step 4 - clean up */
-/* if (tmpbuf != NULL) free(tmpbuf);
- if (packbuf != NULL) free(packbuf);
- if (weallocated) {
- if (displs != NULL) free(displs);
- if (blen != NULL) free(blen);
- }
- return OMPI_SUCCESS;
-
-err_hndl:
- OPAL_OUTPUT((ompi_coll_tuned_stream,"%s:%4d\tError occurred %d, rank %2d", __FILE__,line,err,rank));
- if (tmpbuf != NULL) free(tmpbuf);
- if (packbuf != NULL) free(packbuf);
- if (weallocated) {
- if (displs != NULL) free(displs);
- if (blen != NULL) free(blen);
- }
- return err;
- */
- return -1; /* FIXME: to be changed*/
+ int system_tag = 888;
+ int i, rank, size, err, count;
+ MPI_Aint lb = 0, sendext = 0, recvext = 0;
+ MPI_Request *requests;
+
+ /* Initialize. */
+ rank = smpi_comm_rank(comm);
+ size = smpi_comm_size(comm);
+ XBT_DEBUG("<%d> algorithm alltoall_basic_linear() called.", rank);
+ smpi_datatype_extent(sendtype, &lb, &sendext);
+ smpi_datatype_extent(recvtype, &lb, &recvext);
+ /* simple optimization */
+ err = smpi_datatype_copy((char *)sendbuf + rank * sendcount * sendext,
+ sendcount, sendtype,
+ (char *)recvbuf + rank * recvcount * recvext,
+ recvcount, recvtype);
+ if (err == MPI_SUCCESS && size > 1) {
+ /* Initiate all send/recv to/from others. */
+ requests = xbt_new(MPI_Request, 2 * (size - 1));
+ /* Post all receives first -- a simple optimization */
+ count = 0;
+ for (i = (rank + 1) % size; i != rank; i = (i + 1) % size) {
+ requests[count] =
+ smpi_irecv_init((char *)recvbuf + i * recvcount * recvext, recvcount,
+ recvtype, i, system_tag, comm);
+ count++;
+ }
+ /* Now post all sends in reverse order
+ * - We would like to minimize the search time through message queue
+ * when messages actually arrive in the order in which they were posted.
+ * TODO: check the previous assertion
+ */
+ for (i = (rank + size - 1) % size; i != rank; i = (i + size - 1) % size) {
+ requests[count] =
+ smpi_isend_init((char *)sendbuf + i * sendcount * sendext, sendcount,
+ sendtype, i, system_tag, comm);
+ count++;
+ }
+ /* Wait for them all. */
+ smpi_mpi_startall(count, requests);
+ XBT_DEBUG("<%d> wait for %d requests", rank, count);
+ smpi_mpi_waitall(count, requests, MPI_STATUS_IGNORE);
+ for(i = 0; i < count; i++) {
+ if(requests[i]!=MPI_REQUEST_NULL) smpi_mpi_request_free(&requests[i]);
+ }
+ xbt_free(requests);
+ }
+ return err;
}
-
-/**
- * -----------------------------------------------------------------------------------------------------
- * example usage
- * -----------------------------------------------------------------------------------------------------
- **/
-/*
- * int main() {
-
- int rank;
- int size=12;
-
- proc_tree_t tree;
- for (rank=0;rank<size;rank++) {
- printf("--------------tree for rank %d ----------\n",rank);
- tree = alloc_tree( 2 );
- build_tree( rank, size, &tree );
- print_tree( tree );
- free_tree( tree );
-
+int smpi_coll_basic_alltoallv(void *sendbuf, int *sendcounts,
+ int *senddisps, MPI_Datatype sendtype,
+ void *recvbuf, int *recvcounts,
+ int *recvdisps, MPI_Datatype recvtype,
+ MPI_Comm comm)
+{
+ int system_tag = 889;
+ int i, rank, size, err, count;
+ MPI_Aint lb = 0, sendext = 0, recvext = 0;
+ MPI_Request *requests;
+
+ /* Initialize. */
+ rank = smpi_comm_rank(comm);
+ size = smpi_comm_size(comm);
+ XBT_DEBUG("<%d> algorithm basic_alltoallv() called.", rank);
+ smpi_datatype_extent(sendtype, &lb, &sendext);
+ smpi_datatype_extent(recvtype, &lb, &recvext);
+ /* Local copy from self */
+ err =
+ smpi_datatype_copy((char *)sendbuf + senddisps[rank] * sendext,
+ sendcounts[rank], sendtype,
+ (char *)recvbuf + recvdisps[rank] * recvext,
+ recvcounts[rank], recvtype);
+ if (err == MPI_SUCCESS && size > 1) {
+ /* Initiate all send/recv to/from others. */
+ requests = xbt_new(MPI_Request, 2 * (size - 1));
+ count = 0;
+ /* Create all receives that will be posted first */
+ for (i = 0; i < size; ++i) {
+ if (i == rank || recvcounts[i] == 0) {
+ XBT_DEBUG
+ ("<%d> skip request creation [src = %d, recvcounts[src] = %d]",
+ rank, i, recvcounts[i]);
+ continue;
}
- printf("-------------- bcast ----------\n");
- for (rank=0;rank<size;rank++) {
- bcast( rank, size );
+ requests[count] =
+ smpi_irecv_init((char *)recvbuf + recvdisps[i] * recvext,
+ recvcounts[i], recvtype, i, system_tag, comm);
+ count++;
+ }
+ /* Now create all sends */
+ for (i = 0; i < size; ++i) {
+ if (i == rank || sendcounts[i] == 0) {
+ XBT_DEBUG
+ ("<%d> skip request creation [dst = %d, sendcounts[dst] = %d]",
+ rank, i, sendcounts[i]);
+ continue;
}
-
-
+ requests[count] =
+ smpi_isend_init((char *)sendbuf + senddisps[i] * sendext,
+ sendcounts[i], sendtype, i, system_tag, comm);
+ count++;
+ }
+ /* Wait for them all. */
+ smpi_mpi_startall(count, requests);
+ XBT_DEBUG("<%d> wait for %d requests", rank, count);
+ smpi_mpi_waitall(count, requests, MPI_STATUS_IGNORE);
+ for(i = 0; i < count; i++) {
+ if(requests[i]!=MPI_REQUEST_NULL) smpi_mpi_request_free(&requests[i]);
+ }
+ xbt_free(requests);
+ }
+ return err;
}
-*/
-
-
-
