add mpich's allgatherv ring algo, as the one from star-mpi performs terribly

[simgrid.git] / buildtools / Cmake / DefinePackages.cmake

diff --git a/buildtools/Cmake/DefinePackages.cmake b/buildtools/Cmake/DefinePackages.cmake
index 9e426e0..a32ce0c 100644 (file)
--- a/buildtools/Cmake/DefinePackages.cmake
+++ b/buildtools/Cmake/DefinePackages.cmake
@@ -38,8 +38,10 @@ set(EXTRA_DIST
   src/smpi/colls/COPYRIGHTS
   src/smpi/colls/colls.h
   src/smpi/colls/colls_private.h
+  src/smpi/colls/coll_tuned_topo.h
   src/smpi/private.h
   src/smpi/smpi_mpi_dt_private.h
+  src/surf/cpu_cas01_private.h
   src/surf/cpu_ti_private.h
   src/surf/gtnets/gtnets_interface.h
   src/surf/gtnets/gtnets_simulator.h
@@ -110,6 +112,8 @@ set(SMPI_SRC
   src/smpi/smpi_mpi_dt.c
   src/smpi/smpi_pmpi.c
   src/smpi/smpi_replay.c
+  src/smpi/colls/smpi_openmpi_selector.c
+  src/smpi/colls/smpi_mpich_selector.c
   src/smpi/colls/colls_global.c
   src/smpi/colls/allgather-2dmesh.c
   src/smpi/colls/allgather-3dmesh.c
@@ -126,9 +130,14 @@ set(SMPI_SRC
   src/smpi/colls/allgather-SMP-NTS.c
   src/smpi/colls/allgather-smp-simple.c
   src/smpi/colls/allgather-spreading-simple.c
+  src/smpi/colls/allgather-ompi-neighborexchange.c
   src/smpi/colls/allgatherv-GB.c  
   src/smpi/colls/allgatherv-pair.c
   src/smpi/colls/allgatherv-ring.c
+  src/smpi/colls/allgatherv-ompi-neighborexchange.c
+  src/smpi/colls/allgatherv-ompi-bruck.c
+  src/smpi/colls/allgatherv-mpich-rdb.c
+  src/smpi/colls/allgatherv-mpich-ring.c
   src/smpi/colls/allreduce-lr.c
   src/smpi/colls/allreduce-NTS.c
   src/smpi/colls/allreduce-rab1.c
@@ -144,6 +153,7 @@ set(SMPI_SRC
   src/smpi/colls/allreduce-smp-rsag.c
   src/smpi/colls/allreduce-smp-rsag-lr.c
   src/smpi/colls/allreduce-smp-rsag-rab.c
+  src/smpi/colls/allreduce-ompi-ring-segmented.c
   src/smpi/colls/alltoall-2dmesh.c
   src/smpi/colls/alltoall-3dmesh.c
   #src/smpi/colls/alltoall-bruck.c
@@ -157,6 +167,7 @@ set(SMPI_SRC
   src/smpi/colls/alltoall-ring-mpi-barrier.c
   src/smpi/colls/alltoall-ring-one-barrier.c
   src/smpi/colls/alltoall-simple.c
+  src/smpi/colls/alltoall-ompi-pairwise.c
   src/smpi/colls/alltoallv-pair.c   
   src/smpi/colls/alltoallv-pair-light-barrier.c
   src/smpi/colls/alltoallv-pair-mpi-barrier.c
@@ -166,6 +177,7 @@ set(SMPI_SRC
   src/smpi/colls/alltoallv-ring-mpi-barrier.c
   src/smpi/colls/alltoallv-ring-one-barrier.c
   src/smpi/colls/alltoallv-bruck.c
+  src/smpi/colls/alltoallv-ompi-basic-linear.c
   src/smpi/colls/bcast-arrival-nb.c
   src/smpi/colls/bcast-arrival-pattern-aware.c
   src/smpi/colls/bcast-arrival-pattern-aware-wait.c
@@ -181,11 +193,21 @@ set(SMPI_SRC
   src/smpi/colls/bcast-SMP-binary.c
   src/smpi/colls/bcast-SMP-binomial.c
   src/smpi/colls/bcast-SMP-linear.c
+  src/smpi/colls/coll_tuned_topo.c
+  src/smpi/colls/bcast-ompi-split-bintree.c
+  src/smpi/colls/bcast-ompi-pipeline.c
   src/smpi/colls/reduce-arrival-pattern-aware.c
   src/smpi/colls/reduce-binomial.c
   src/smpi/colls/reduce-flat-tree.c
   src/smpi/colls/reduce-NTSL.c
   src/smpi/colls/reduce-scatter-gather.c
+  src/smpi/colls/reduce-ompi.c
+  src/smpi/colls/gather-ompi.c
+  src/smpi/colls/reduce_scatter-ompi.c
+  src/smpi/colls/reduce_scatter-mpich.c
+  src/smpi/colls/smpi_automatic_selector.c
+  src/smpi/colls/scatter-ompi.c
+  src/smpi/colls/barrier-ompi.c
   )
 
 if(SMPI_F2C)
@@ -330,6 +352,7 @@ set(MSG_SRC
   src/msg/msg_io.c
   src/msg/msg_mailbox.c
   src/msg/msg_process.c
+  src/msg/msg_synchro.c
   src/msg/msg_task.c
   src/msg/msg_vm.c
   )
@@ -393,6 +416,8 @@ set(BINDINGS_SRC
 set(JMSG_C_SRC
   src/bindings/java/jmsg.c
   src/bindings/java/jmsg.h
+  src/bindings/java/jmsg_as.c
+  src/bindings/java/jmsg_as.h
   src/bindings/java/jmsg_comm.c
   src/bindings/java/jmsg_comm.h
   src/bindings/java/jmsg_file.c
@@ -418,6 +443,7 @@ set(JMSG_C_SRC
 )
 
 set(JMSG_JAVA_SRC
+  src/bindings/java/org/simgrid/msg/As.java    
   src/bindings/java/org/simgrid/msg/Comm.java
   src/bindings/java/org/simgrid/msg/File.java
   src/bindings/java/org/simgrid/msg/Host.java
@@ -427,6 +453,7 @@ set(JMSG_JAVA_SRC
   src/bindings/java/org/simgrid/msg/Msg.java
   src/bindings/java/org/simgrid/msg/MsgException.java
   src/bindings/java/org/simgrid/msg/Mutex.java
+  src/bindings/java/org/simgrid/msg/Semaphore.java
   src/bindings/java/org/simgrid/msg/NativeException.java
   src/bindings/java/org/simgrid/msg/Process.java
   src/bindings/java/org/simgrid/msg/ProcessKilledError.java
@@ -532,7 +559,6 @@ set(headers_to_install
   include/xbt/dynar.h
   include/xbt/ex.h
   include/xbt/fifo.h
-  include/xbt/file_stat.h
   include/xbt/function_types.h
   include/xbt/graph.h
   include/xbt/graphxml.h
@@ -832,14 +858,16 @@ set(EXAMPLES_CMAKEFILES_TXT
   examples/java/startKillTime/CMakeLists.txt
   examples/java/suspend/CMakeLists.txt
   examples/java/tracing/CMakeLists.txt
-  examples/scala/CMakeLists.txt
-  examples/scala/masterslave/CMakeLists.txt
   examples/lua/CMakeLists.txt
   examples/msg/CMakeLists.txt
   examples/msg/actions/CMakeLists.txt
   examples/msg/bittorrent/CMakeLists.txt
+  examples/msg/chainsend/CMakeLists.txt
   examples/msg/chord/CMakeLists.txt
   examples/msg/cloud/CMakeLists.txt
+  examples/msg/energy/e1/CMakeLists.txt
+  examples/msg/energy/e2/CMakeLists.txt
+  examples/msg/energy/e3/CMakeLists.txt
   examples/msg/gpu/CMakeLists.txt
   examples/msg/gtnets/CMakeLists.txt
   examples/msg/icomms/CMakeLists.txt
@@ -850,19 +878,25 @@ set(EXAMPLES_CMAKEFILES_TXT
   examples/msg/migration/CMakeLists.txt
   examples/msg/ns3/CMakeLists.txt
   examples/msg/parallel_task/CMakeLists.txt
+  examples/msg/pastry/CMakeLists.txt
   examples/msg/pmm/CMakeLists.txt
   examples/msg/priority/CMakeLists.txt
   examples/msg/properties/CMakeLists.txt
+  examples/msg/semaphores/CMakeLists.txt
   examples/msg/sendrecv/CMakeLists.txt
-  examples/msg/chainsend/CMakeLists.txt
   examples/msg/start_kill_time/CMakeLists.txt
   examples/msg/suspend/CMakeLists.txt
   examples/msg/token_ring/CMakeLists.txt
   examples/msg/tracing/CMakeLists.txt
+  examples/scala/CMakeLists.txt
+  examples/scala/master_slave_bypass/CMakeLists.txt
+  examples/scala/master_slave_kill/CMakeLists.txt
+  examples/scala/masterslave/CMakeLists.txt
   examples/simdag/CMakeLists.txt
   examples/simdag/dax/CMakeLists.txt
   examples/simdag/dot/CMakeLists.txt
   examples/simdag/goal/CMakeLists.txt
+  examples/simdag/io/CMakeLists.txt
   examples/simdag/metaxml/CMakeLists.txt
   examples/simdag/properties/CMakeLists.txt
   examples/simdag/scheduling/CMakeLists.txt
@@ -876,22 +910,40 @@ set(TESHSUITE_CMAKEFILES_TXT
   teshsuite/msg/CMakeLists.txt
   teshsuite/msg/trace/CMakeLists.txt
   teshsuite/simdag/CMakeLists.txt
+  teshsuite/simdag/availability/CMakeLists.txt
   teshsuite/simdag/network/CMakeLists.txt
   teshsuite/simdag/network/mxn/CMakeLists.txt
   teshsuite/simdag/network/p2p/CMakeLists.txt
   teshsuite/simdag/partask/CMakeLists.txt
   teshsuite/simdag/platforms/CMakeLists.txt
-  teshsuite/simdag/availability/CMakeLists.txt
-  teshsuite/xbt/CMakeLists.txt
   teshsuite/smpi/CMakeLists.txt
-  teshsuite/smpi/mpich-test/CMakeLists.txt
-  teshsuite/smpi/mpich-test/env/CMakeLists.txt
-  teshsuite/smpi/mpich-test/coll/CMakeLists.txt
-  teshsuite/smpi/mpich-test/context/CMakeLists.txt
-  teshsuite/smpi/mpich-test/profile/CMakeLists.txt
-  teshsuite/smpi/mpich-test/pt2pt/CMakeLists.txt
+  teshsuite/smpi/mpich3-test/CMakeLists.txt
+  teshsuite/smpi/mpich3-test/attr/CMakeLists.txt
+  teshsuite/smpi/mpich3-test/comm/CMakeLists.txt
+  teshsuite/smpi/mpich3-test/coll/CMakeLists.txt
+  teshsuite/smpi/mpich3-test/datatype/CMakeLists.txt
+  teshsuite/smpi/mpich3-test/group/CMakeLists.txt
+  teshsuite/smpi/mpich3-test/init/CMakeLists.txt
+  teshsuite/smpi/mpich3-test/pt2pt/CMakeLists.txt
+  teshsuite/xbt/CMakeLists.txt
   )
 
+if(SMPI_F2C)
+  set(TESHSUITE_CMAKEFILES_TXT
+    ${TESHSUITE_CMAKEFILES_TXT}
+    teshsuite/smpi/mpich3-test/f77/comm/CMakeLists.txt
+    teshsuite/smpi/mpich3-test/f77/coll/CMakeLists.txt
+    teshsuite/smpi/mpich3-test/f77/pt2pt/CMakeLists.txt
+    teshsuite/smpi/mpich3-test/f77/datatype/CMakeLists.txt
+    teshsuite/smpi/mpich3-test/f77/ext/CMakeLists.txt
+    teshsuite/smpi/mpich3-test/f77/init/CMakeLists.txt
+    teshsuite/smpi/mpich3-test/f90/coll/CMakeLists.txt
+    teshsuite/smpi/mpich3-test/f90/pt2pt/CMakeLists.txt
+    teshsuite/smpi/mpich3-test/f90/datatype/CMakeLists.txt
+    teshsuite/smpi/mpich3-test/f90/init/CMakeLists.txt
+  )
+endif()
+
 set(TOOLS_CMAKEFILES_TXT
   tools/CMakeLists.txt
   tools/graphicator/CMakeLists.txt
@@ -977,6 +1029,7 @@ set(PLATFORMS_EXAMPLES
   examples/platforms/conf/transform_optorsim_platform.pl
   examples/platforms/config.xml
   examples/platforms/content/storage_content.txt
+  examples/platforms/content/win_storage_content.txt
   examples/platforms/data_center.xml
   examples/platforms/g5k.xml
   examples/platforms/generation_scripts/create_hierarchical_clusters.pl