add scatter algos from ompi

[simgrid.git] / buildtools / Cmake / DefinePackages.cmake

diff --git a/buildtools/Cmake/DefinePackages.cmake b/buildtools/Cmake/DefinePackages.cmake
index f94813c..4b5c74e 100644 (file)
--- a/buildtools/Cmake/DefinePackages.cmake
+++ b/buildtools/Cmake/DefinePackages.cmake
@@ -38,6 +38,7 @@ set(EXTRA_DIST
   src/smpi/colls/COPYRIGHTS
   src/smpi/colls/colls.h
   src/smpi/colls/colls_private.h
+  src/smpi/colls/coll_tuned_topo.h
   src/smpi/private.h
   src/smpi/smpi_mpi_dt_private.h
   src/surf/cpu_ti_private.h
@@ -110,10 +111,11 @@ set(SMPI_SRC
   src/smpi/smpi_mpi_dt.c
   src/smpi/smpi_pmpi.c
   src/smpi/smpi_replay.c
+  src/smpi/colls/smpi_openmpi_selector.c
   src/smpi/colls/colls_global.c
-  #src/smpi/colls/allgather-2dmesh.c
-  #src/smpi/colls/allgather-3dmesh.c
-  #src/smpi/colls/allgather-bruck.c
+  src/smpi/colls/allgather-2dmesh.c
+  src/smpi/colls/allgather-3dmesh.c
+  src/smpi/colls/allgather-bruck.c
   src/smpi/colls/allgather-GB.c
   src/smpi/colls/allgather-loosely-lr.c
   src/smpi/colls/allgather-lr.c
@@ -126,21 +128,27 @@ set(SMPI_SRC
   src/smpi/colls/allgather-SMP-NTS.c
   src/smpi/colls/allgather-smp-simple.c
   src/smpi/colls/allgather-spreading-simple.c
+  src/smpi/colls/allgather-ompi-neighborexchange.c
+  src/smpi/colls/allgatherv-GB.c  
+  src/smpi/colls/allgatherv-pair.c
+  src/smpi/colls/allgatherv-ring.c
+  src/smpi/colls/allgatherv-ompi-neighborexchange.c
   src/smpi/colls/allreduce-lr.c
   src/smpi/colls/allreduce-NTS.c
   src/smpi/colls/allreduce-rab1.c
   src/smpi/colls/allreduce-rab2.c
-  #src/smpi/colls/allreduce-rab-rdb.c
+  src/smpi/colls/allreduce-rab-rdb.c
   #src/smpi/colls/allreduce-rab-reduce-scatter.c
   src/smpi/colls/allreduce-rab-rsag.c
   src/smpi/colls/allreduce-rdb.c
   src/smpi/colls/allreduce-redbcast.c
   src/smpi/colls/allreduce-smp-binomial.c
-  #src/smpi/colls/allreduce-smp-binomial-pipeline.c
+  src/smpi/colls/allreduce-smp-binomial-pipeline.c
   src/smpi/colls/allreduce-smp-rdb.c
   src/smpi/colls/allreduce-smp-rsag.c
   src/smpi/colls/allreduce-smp-rsag-lr.c
   src/smpi/colls/allreduce-smp-rsag-rab.c
+  src/smpi/colls/allreduce-ompi-ring-segmented.c
   src/smpi/colls/alltoall-2dmesh.c
   src/smpi/colls/alltoall-3dmesh.c
   #src/smpi/colls/alltoall-bruck.c
@@ -158,7 +166,10 @@ set(SMPI_SRC
   src/smpi/colls/alltoallv-pair-light-barrier.c
   src/smpi/colls/alltoallv-pair-mpi-barrier.c
   src/smpi/colls/alltoallv-pair-one-barrier.c 
-  src/smpi/colls/alltoallv-pairwise.c
+  src/smpi/colls/alltoallv-ring.c
+  src/smpi/colls/alltoallv-ring-light-barrier.c
+  src/smpi/colls/alltoallv-ring-mpi-barrier.c
+  src/smpi/colls/alltoallv-ring-one-barrier.c
   src/smpi/colls/alltoallv-bruck.c
   src/smpi/colls/bcast-arrival-nb.c
   src/smpi/colls/bcast-arrival-pattern-aware.c
@@ -175,11 +186,18 @@ set(SMPI_SRC
   src/smpi/colls/bcast-SMP-binary.c
   src/smpi/colls/bcast-SMP-binomial.c
   src/smpi/colls/bcast-SMP-linear.c
+  src/smpi/colls/coll_tuned_topo.c
+  src/smpi/colls/bcast-ompi-split-bintree.c
+  src/smpi/colls/bcast-ompi-pipeline.c
   src/smpi/colls/reduce-arrival-pattern-aware.c
   src/smpi/colls/reduce-binomial.c
   src/smpi/colls/reduce-flat-tree.c
   src/smpi/colls/reduce-NTSL.c
   src/smpi/colls/reduce-scatter-gather.c
+  src/smpi/colls/reduce-ompi.c
+  src/smpi/colls/gather-ompi.c
+  src/smpi/colls/reduce_scatter-ompi.c
+  src/smpi/colls/scatter-ompi.c
   )
 
 if(SMPI_F2C)
@@ -282,7 +300,6 @@ set(SURF_SRC
   src/surf/surf_routing_full.c
   src/surf/surf_routing_generic.c
   src/surf/surf_routing_none.c
-  src/surf/surf_routing_rulebased.c
   src/surf/surf_routing_vivaldi.c
   src/surf/surfxml_parse.c
   src/surf/surfxml_parseplatf.c
@@ -325,6 +342,7 @@ set(MSG_SRC
   src/msg/msg_io.c
   src/msg/msg_mailbox.c
   src/msg/msg_process.c
+  src/msg/msg_synchro.c
   src/msg/msg_task.c
   src/msg/msg_vm.c
   )
@@ -388,6 +406,8 @@ set(BINDINGS_SRC
 set(JMSG_C_SRC
   src/bindings/java/jmsg.c
   src/bindings/java/jmsg.h
+  src/bindings/java/jmsg_as.c
+  src/bindings/java/jmsg_as.h
   src/bindings/java/jmsg_comm.c
   src/bindings/java/jmsg_comm.h
   src/bindings/java/jmsg_file.c
@@ -413,6 +433,7 @@ set(JMSG_C_SRC
 )
 
 set(JMSG_JAVA_SRC
+  src/bindings/java/org/simgrid/msg/As.java    
   src/bindings/java/org/simgrid/msg/Comm.java
   src/bindings/java/org/simgrid/msg/File.java
   src/bindings/java/org/simgrid/msg/Host.java
@@ -422,6 +443,7 @@ set(JMSG_JAVA_SRC
   src/bindings/java/org/simgrid/msg/Msg.java
   src/bindings/java/org/simgrid/msg/MsgException.java
   src/bindings/java/org/simgrid/msg/Mutex.java
+  src/bindings/java/org/simgrid/msg/Semaphore.java
   src/bindings/java/org/simgrid/msg/NativeException.java
   src/bindings/java/org/simgrid/msg/Process.java
   src/bindings/java/org/simgrid/msg/ProcessKilledError.java
@@ -527,7 +549,6 @@ set(headers_to_install
   include/xbt/dynar.h
   include/xbt/ex.h
   include/xbt/fifo.h
-  include/xbt/file_stat.h
   include/xbt/function_types.h
   include/xbt/graph.h
   include/xbt/graphxml.h
@@ -610,7 +631,6 @@ set(simgrid_sources
   ${SIMGRID_SRC}
   ${SIMIX_SRC}
   ${SURF_SRC}
-  ${TRACING_SRC}
   ${XBT_SRC}
   )
 
@@ -697,7 +717,6 @@ set(DOC_SOURCES
 
   doc/HelloWorld/CMakeLists.txt
   doc/HelloWorld/HelloWorld.c
-  doc/HelloWorld/FindPcreWin.cmake
   doc/HelloWorld/README
 
   doc/doxygen/FAQ.doc
@@ -833,6 +852,7 @@ set(EXAMPLES_CMAKEFILES_TXT
   examples/msg/CMakeLists.txt
   examples/msg/actions/CMakeLists.txt
   examples/msg/bittorrent/CMakeLists.txt
+  examples/msg/chainsend/CMakeLists.txt
   examples/msg/chord/CMakeLists.txt
   examples/msg/cloud/CMakeLists.txt
   examples/msg/gpu/CMakeLists.txt
@@ -848,12 +868,16 @@ set(EXAMPLES_CMAKEFILES_TXT
   examples/msg/pmm/CMakeLists.txt
   examples/msg/priority/CMakeLists.txt
   examples/msg/properties/CMakeLists.txt
+  examples/msg/semaphores/CMakeLists.txt
   examples/msg/sendrecv/CMakeLists.txt
-  examples/msg/chainsend/CMakeLists.txt
   examples/msg/start_kill_time/CMakeLists.txt
   examples/msg/suspend/CMakeLists.txt
   examples/msg/token_ring/CMakeLists.txt
   examples/msg/tracing/CMakeLists.txt
+  examples/scala/CMakeLists.txt
+  examples/scala/master_slave_bypass/CMakeLists.txt
+  examples/scala/master_slave_kill/CMakeLists.txt
+  examples/scala/masterslave/CMakeLists.txt
   examples/simdag/CMakeLists.txt
   examples/simdag/dax/CMakeLists.txt
   examples/simdag/dot/CMakeLists.txt
@@ -871,20 +895,20 @@ set(TESHSUITE_CMAKEFILES_TXT
   teshsuite/msg/CMakeLists.txt
   teshsuite/msg/trace/CMakeLists.txt
   teshsuite/simdag/CMakeLists.txt
+  teshsuite/simdag/availability/CMakeLists.txt
   teshsuite/simdag/network/CMakeLists.txt
   teshsuite/simdag/network/mxn/CMakeLists.txt
   teshsuite/simdag/network/p2p/CMakeLists.txt
   teshsuite/simdag/partask/CMakeLists.txt
   teshsuite/simdag/platforms/CMakeLists.txt
-  teshsuite/simdag/availability/CMakeLists.txt
-  teshsuite/xbt/CMakeLists.txt
   teshsuite/smpi/CMakeLists.txt
   teshsuite/smpi/mpich-test/CMakeLists.txt
-  teshsuite/smpi/mpich-test/env/CMakeLists.txt
   teshsuite/smpi/mpich-test/coll/CMakeLists.txt
   teshsuite/smpi/mpich-test/context/CMakeLists.txt
+  teshsuite/smpi/mpich-test/env/CMakeLists.txt
   teshsuite/smpi/mpich-test/profile/CMakeLists.txt
   teshsuite/smpi/mpich-test/pt2pt/CMakeLists.txt
+  teshsuite/xbt/CMakeLists.txt
   )
 
 set(TOOLS_CMAKEFILES_TXT
@@ -920,10 +944,9 @@ set(CMAKE_SOURCE_FILES
   buildtools/Cmake/Modules/FindLibunwind.cmake
   buildtools/Cmake/Modules/FindLua51Simgrid.cmake
   buildtools/Cmake/Modules/FindNS3.cmake
-  buildtools/Cmake/Modules/FindPCRE.cmake
-  buildtools/Cmake/Modules/FindPcreWin.cmake
   buildtools/Cmake/Modules/FindRngStream.cmake
   buildtools/Cmake/Modules/FindRubySimgrid.cmake
+  buildtools/Cmake/Modules/FindScala.cmake
   buildtools/Cmake/Modules/FindSimGrid.cmake
   buildtools/Cmake/Modules/FindValgrind.cmake
   buildtools/Cmake/Option.cmake
@@ -965,7 +988,6 @@ set(PLATFORMS_EXAMPLES
   examples/platforms/cluster.xml
   examples/platforms/cluster_and_one_host.xml
   examples/platforms/cluster_no_backbone.xml
-  examples/platforms/cluster_routing_rulebased.xml
   examples/platforms/clusters_routing_full.xml
   examples/platforms/conf/gridpp_grid_2004.conf
   examples/platforms/conf/gridpp_grid_2004.xml