Added Semaphore visibility to the Java bindings

[simgrid.git] / buildtools / Cmake / DefinePackages.cmake

diff --git a/buildtools/Cmake/DefinePackages.cmake b/buildtools/Cmake/DefinePackages.cmake
index edbb8c3..10c1f03 100644 (file)
--- a/buildtools/Cmake/DefinePackages.cmake
+++ b/buildtools/Cmake/DefinePackages.cmake
@@ -2,6 +2,7 @@
 
 set(EXTRA_DIST
   include/xbt/win32_ucontext.h
+  src/bindings/java/MANIFEST.MF
   src/include/instr/instr_interface.h
   src/include/mc/datatypes.h
   src/include/mc/mc.h
@@ -34,6 +35,8 @@ set(EXTRA_DIST
   src/simix/smx_smurf_private.h
   src/simix/smx_synchro_private.h
   src/smpi/README
+  src/smpi/colls/COPYRIGHTS
+  src/smpi/colls/colls.h
   src/smpi/private.h
   src/smpi/smpi_mpi_dt_private.h
   src/surf/cpu_ti_private.h
@@ -106,6 +109,73 @@ set(SMPI_SRC
   src/smpi/smpi_mpi_dt.c
   src/smpi/smpi_pmpi.c
   src/smpi/smpi_replay.c
+  #src/smpi/colls/allgather-2dmesh.c
+  #src/smpi/colls/allgather-3dmesh.c
+  #src/smpi/colls/allgather-bruck.c
+  src/smpi/colls/allgather-GB.c
+  src/smpi/colls/allgather-loosely-lr.c
+  src/smpi/colls/allgather-lr.c
+  src/smpi/colls/allgather-NTSLR.c
+  src/smpi/colls/allgather-NTSLR-NB.c
+  src/smpi/colls/allgather-pair.c
+  src/smpi/colls/allgather-rdb.c
+  src/smpi/colls/allgather-RDB.c
+  src/smpi/colls/allgather-rhv.c
+  src/smpi/colls/allgather-ring.c
+  src/smpi/colls/allgather-SMP-NTS.c
+  src/smpi/colls/allgather-smp-simple.c
+  src/smpi/colls/allgather-SMP-simple.c
+  src/smpi/colls/allgather-spreading-simple.c
+  src/smpi/colls/allreduce-lr.c
+  src/smpi/colls/allreduce-NTS.c
+  src/smpi/colls/allreduce-rab1.c
+  src/smpi/colls/allreduce-rab2.c
+  #src/smpi/colls/allreduce-rab-rdb.c
+  #src/smpi/colls/allreduce-rab-reduce-scatter.c
+  src/smpi/colls/allreduce-rab-rsag.c
+  src/smpi/colls/allreduce-rdb.c
+  src/smpi/colls/allreduce-redbcast.c
+  src/smpi/colls/allreduce-smp-binomial.c
+  #src/smpi/colls/allreduce-smp-binomial-pipeline.c
+  src/smpi/colls/allreduce-smp-rdb.c
+  src/smpi/colls/allreduce-smp-rsag.c
+  src/smpi/colls/allreduce-smp-rsag-lr.c
+  src/smpi/colls/allreduce-smp-rsag-rab.c
+  src/smpi/colls/alltoall-2dmesh.c
+  src/smpi/colls/alltoall-3dmesh.c
+  #src/smpi/colls/alltoall-bruck.c
+  src/smpi/colls/alltoall-pair.c
+  src/smpi/colls/alltoall-pair-light-barrier.c
+  src/smpi/colls/alltoall-pair-mpi-barrier.c
+  src/smpi/colls/alltoall-pair-one-barrier.c
+  src/smpi/colls/alltoall-rdb.c
+  src/smpi/colls/alltoall-ring.c
+  src/smpi/colls/alltoall-ring-light-barrier.c
+  src/smpi/colls/alltoall-ring-mpi-barrier.c
+  src/smpi/colls/alltoall-ring-one-barrier.c
+  src/smpi/colls/alltoall-simple.c
+  src/smpi/colls/bcast-arrival-nb.c
+  src/smpi/colls/bcast-arrival-pattern-aware.c
+  src/smpi/colls/bcast-arrival-pattern-aware-wait.c
+  src/smpi/colls/bcast-arrival-scatter.c
+  src/smpi/colls/bcast-binomial-tree.c
+  src/smpi/colls/bcast-flattree.c
+  src/smpi/colls/bcast-flattree-pipeline.c
+  src/smpi/colls/bcast-NTSB.c
+  src/smpi/colls/bcast-NTSL.c
+  src/smpi/colls/bcast-NTSL-Isend.c
+  src/smpi/colls/bcast-scatter-LR-allgather.c
+  src/smpi/colls/bcast-scatter-rdb-allgather.c
+  src/smpi/colls/bcast-SMP-binary.c
+  src/smpi/colls/bcast-SMP-binomial.c
+  src/smpi/colls/bcast-SMP-linear.c
+  src/smpi/colls/bcast-TSB.c
+  src/smpi/colls/reduce-arrival-pattern-aware.c
+  src/smpi/colls/reduce-binomial.c
+  src/smpi/colls/reduce-flat-tree.c
+  src/smpi/colls/reduce-NTSL.c
+  src/smpi/colls/reduce-scatter-gather.c
+  src/smpi/colls/star-reduction.c
   )
 
 if(SMPI_F2C)
@@ -215,6 +285,7 @@ set(SURF_SRC
   src/surf/trace_mgr.c
   src/surf/workstation.c
   src/surf/workstation_ptask_L07.c
+  src/surf/vm_workstation.c
   src/xbt/xbt_sg_stubs.c
   )
 
@@ -232,6 +303,7 @@ set(SIMIX_SRC
   src/simix/smx_smurf.c
   src/simix/smx_synchro.c
   src/simix/smx_user.c
+  src/simix/smx_vm.c
   )
 
 set(SIMGRID_SRC
@@ -251,6 +323,7 @@ set(MSG_SRC
   src/msg/msg_io.c
   src/msg/msg_mailbox.c
   src/msg/msg_process.c
+  src/msg/msg_synchro.c
   src/msg/msg_task.c
   src/msg/msg_vm.c
   )
@@ -286,6 +359,7 @@ set(EXTRA_DIST
 #* ****************************************************************************************** *#
 
 set(SIMDAG_SRC
+  src/simdag/instr_sd_task.c
   src/simdag/sd_daxloader.c
   src/simdag/sd_global.c
   src/simdag/sd_link.c
@@ -310,6 +384,76 @@ set(BINDINGS_SRC
   src/bindings/lua/simgrid_lua.h
   )
 
+set(JMSG_C_SRC
+  src/bindings/java/jmsg.c
+  src/bindings/java/jmsg.h
+  src/bindings/java/jmsg_as.c
+  src/bindings/java/jmsg_as.h
+  src/bindings/java/jmsg_comm.c
+  src/bindings/java/jmsg_comm.h
+  src/bindings/java/jmsg_file.c
+  src/bindings/java/jmsg_file.h
+  src/bindings/java/jmsg_host.c
+  src/bindings/java/jmsg_host.h
+  src/bindings/java/jmsg_process.c
+  src/bindings/java/jmsg_process.h
+  src/bindings/java/jmsg_rngstream.c
+  src/bindings/java/jmsg_rngstream.h
+  src/bindings/java/jmsg_synchro.c
+  src/bindings/java/jmsg_synchro.h
+  src/bindings/java/jmsg_task.c
+  src/bindings/java/jmsg_task.h
+  src/bindings/java/jmsg_vm.c
+  src/bindings/java/jmsg_vm.h
+  src/bindings/java/jxbt_utilities.c
+  src/bindings/java/jxbt_utilities.h
+  src/bindings/java/smx_context_cojava.c
+  src/bindings/java/smx_context_cojava.h
+  src/bindings/java/smx_context_java.c
+  src/bindings/java/smx_context_java.h
+)
+
+set(JMSG_JAVA_SRC
+  src/bindings/java/org/simgrid/msg/As.java    
+  src/bindings/java/org/simgrid/msg/Comm.java
+  src/bindings/java/org/simgrid/msg/File.java
+  src/bindings/java/org/simgrid/msg/Host.java
+  src/bindings/java/org/simgrid/msg/HostFailureException.java
+  src/bindings/java/org/simgrid/msg/HostNotFoundException.java
+  src/bindings/java/org/simgrid/msg/JniException.java
+  src/bindings/java/org/simgrid/msg/Msg.java
+  src/bindings/java/org/simgrid/msg/MsgException.java
+  src/bindings/java/org/simgrid/msg/Mutex.java
+  src/bindings/java/org/simgrid/msg/Semaphore.java
+  src/bindings/java/org/simgrid/msg/NativeException.java
+  src/bindings/java/org/simgrid/msg/Process.java
+  src/bindings/java/org/simgrid/msg/ProcessKilledError.java
+  src/bindings/java/org/simgrid/msg/ProcessNotFoundException.java
+  src/bindings/java/org/simgrid/msg/RngStream.java
+  src/bindings/java/org/simgrid/msg/Task.java
+  src/bindings/java/org/simgrid/msg/TaskCancelledException.java
+  src/bindings/java/org/simgrid/msg/TimeoutException.java
+  src/bindings/java/org/simgrid/msg/TransferFailureException.java
+  src/bindings/java/org/simgrid/msg/VM.java
+)
+
+set(JTRACE_C_SRC
+  src/bindings/java/jtrace.c
+  src/bindings/java/jtrace.h
+)
+
+set(JTRACE_JAVA_SRC
+  src/bindings/java/org/simgrid/trace/Trace.java
+)
+
+if(HAVE_TRACING)
+  list(APPEND JMSG_C_SRC ${JTRACE_C_SRC})
+  list(APPEND JMSG_JAVA_SRC ${JTRACE_JAVA_SRC})
+else()
+  list(APPEND EXTRA_DIST ${JTRACE_C_SRC})
+  list(APPEND EXTRA_DIST ${JTRACE_JAVA_SRC})
+endif()
+
 set(LUA_SRC
   src/bindings/lua/lua_comm.c
   src/bindings/lua/lua_host.c
@@ -355,6 +499,7 @@ set(MC_SRC
   src/mc/mc_request.c
   src/mc/mc_state.c
   src/mc/memory_map.c
+  src/mc/mc_pair.c
   )
 
 set(headers_to_install
@@ -371,6 +516,7 @@ set(headers_to_install
   include/smpi/mpif.h
   include/smpi/smpi.h
   include/smpi/smpi_cocci.h
+  include/smpi/smpi_main.h
   include/surf/simgrid_dtd.h
   include/surf/surf_routing.h
   include/surf/surfxml_parse.h
@@ -483,6 +629,13 @@ else()
     )
 endif()
 
+if(enable_smpi)
+  set(simgrid_sources
+    ${simgrid_sources}
+    ${SMPI_SRC}
+    )
+endif()
+
 if(${HAVE_TRACING})
   set(simgrid_sources
     ${simgrid_sources}
@@ -539,8 +692,16 @@ set(DOC_SOURCES
   doc/simix.fig
   doc/surf_nutshell.fig
   doc/triva-graph_configuration.png
+  doc/triva-graph_configuration.svg
   doc/triva-graph_visualization.png
+  doc/triva-graph_visualization.svg
   doc/triva-time_interval.png
+  doc/triva-time_interval.svg
+
+  doc/HelloWorld/CMakeLists.txt
+  doc/HelloWorld/HelloWorld.c
+  doc/HelloWorld/FindPcreWin.cmake
+  doc/HelloWorld/README
 
   doc/doxygen/FAQ.doc
   doc/doxygen/advanced.doc
@@ -564,6 +725,7 @@ set(DOC_SOURCES
   doc/doxygen/module-sd.doc
   doc/doxygen/module-simix.doc
   doc/doxygen/module-surf.doc
+  doc/doxygen/module-smpi.doc
   doc/doxygen/module-trace.doc
   doc/doxygen/module-xbt.doc
   doc/doxygen/modules.doc
@@ -641,7 +803,9 @@ set(txt_files
   AUTHORS
   COPYING
   README
+  README.java
   ChangeLog
+  ChangeLog.SimGrid-java
   INSTALL
   LICENSE-LGPL-2.1
   NEWS
@@ -650,6 +814,24 @@ set(txt_files
   )
 
 set(EXAMPLES_CMAKEFILES_TXT
+  examples/java/CMakeLists.txt
+  examples/java/async/CMakeLists.txt
+  examples/java/bittorrent/CMakeLists.txt
+  examples/java/chord/CMakeLists.txt
+  examples/java/cloud/CMakeLists.txt
+  examples/java/commTime/CMakeLists.txt
+  examples/java/io/CMakeLists.txt
+  examples/java/kademlia/CMakeLists.txt
+  examples/java/master_slave_bypass/CMakeLists.txt
+  examples/java/master_slave_kill/CMakeLists.txt
+  examples/java/masterslave/CMakeLists.txt
+  examples/java/migration/CMakeLists.txt
+  examples/java/mutualExclusion/CMakeLists.txt
+  examples/java/pingPong/CMakeLists.txt
+  examples/java/priority/CMakeLists.txt
+  examples/java/startKillTime/CMakeLists.txt
+  examples/java/suspend/CMakeLists.txt
+  examples/java/tracing/CMakeLists.txt
   examples/lua/CMakeLists.txt
   examples/msg/CMakeLists.txt
   examples/msg/actions/CMakeLists.txt
@@ -697,6 +879,7 @@ set(TESHSUITE_CMAKEFILES_TXT
   teshsuite/simdag/network/p2p/CMakeLists.txt
   teshsuite/simdag/partask/CMakeLists.txt
   teshsuite/simdag/platforms/CMakeLists.txt
+  teshsuite/simdag/availability/CMakeLists.txt
   teshsuite/xbt/CMakeLists.txt
   teshsuite/smpi/CMakeLists.txt
   teshsuite/smpi/mpich-test/CMakeLists.txt
@@ -731,6 +914,7 @@ set(CMAKE_SOURCE_FILES
   buildtools/Cmake/GenerateDocWin.cmake
   buildtools/Cmake/MaintainerMode.cmake
   buildtools/Cmake/MakeExe.cmake
+  buildtools/Cmake/MakeJava.cmake
   buildtools/Cmake/MakeLib.cmake
   buildtools/Cmake/MakeLibWin.cmake
   buildtools/Cmake/Modules/FindF2c.cmake
@@ -757,15 +941,14 @@ set(CMAKE_SOURCE_FILES
   buildtools/Cmake/Scripts/postinstall.sh
   buildtools/Cmake/Scripts/preinstall.sh
   buildtools/Cmake/Scripts/tesh.pl
-  buildtools/Cmake/Scripts/test_java.sh
   buildtools/Cmake/Scripts/update_tesh.pl
   buildtools/Cmake/Supernovae.cmake
   buildtools/Cmake/UnitTesting.cmake
   buildtools/Cmake/src/internal_config.h.in
   buildtools/Cmake/src/simgrid.nsi.in
   buildtools/Cmake/test_prog/prog_AC_CHECK_MCSC.c
-  buildtools/Cmake/test_prog/prog_getline.c
   buildtools/Cmake/test_prog/prog_gnu_dynlinker.c
+  buildtools/Cmake/test_prog/prog_gtnets.cpp
   buildtools/Cmake/test_prog/prog_mutex_timedlock.c
   buildtools/Cmake/test_prog/prog_printf_null.c
   buildtools/Cmake/test_prog/prog_sem_init.c
@@ -775,7 +958,6 @@ set(CMAKE_SOURCE_FILES
   buildtools/Cmake/test_prog/prog_stackgrowth.c
   buildtools/Cmake/test_prog/prog_stacksetup.c
   buildtools/Cmake/test_prog/prog_thread_storage.c
-  buildtools/Cmake/test_prog/prog_va_copy.c
   buildtools/Cmake/test_prog/prog_vsnprintf.c
   )