start including S4U in the doc

[simgrid.git] / tools / cmake / DefinePackages.cmake

diff --git a/tools/cmake/DefinePackages.cmake b/tools/cmake/DefinePackages.cmake
index 61bd33b..2bd4041 100644 (file)
--- a/tools/cmake/DefinePackages.cmake
+++ b/tools/cmake/DefinePackages.cmake
@@ -43,6 +43,7 @@ set(EXTRA_DIST
   src/smpi/colls/colls_private.h
   src/smpi/colls/smpi_mvapich2_selector_stampede.h
   src/smpi/private.h
+  src/smpi/private.hpp
   src/smpi/smpi_mpi_dt_private.h
   src/surf/cpu_cas01.hpp
   src/surf/cpu_interface.hpp
@@ -89,8 +90,8 @@ set(EXTRA_DIST
   src/xbt/automaton/parserPromela.tab.cacc
   src/xbt/automaton/parserPromela.tab.hacc
   src/xbt/automaton/parserPromela.yacc
-  src/xbt/backtrace_dummy.c
-  src/xbt/backtrace_linux.c
+  src/xbt/backtrace_dummy.cpp
+  src/xbt/backtrace_linux.cpp
   src/xbt/dict_private.h
   src/xbt/ex_interface.h
   src/xbt/fifo_private.h
@@ -214,7 +215,7 @@ set(SMPI_SRC
   src/smpi/colls/reduce-rab.c
   src/smpi/colls/scatter-ompi.c
   src/smpi/colls/scatter-mvapich-two-level.c
-  src/smpi/colls/smpi_automatic_selector.c
+  src/smpi/colls/smpi_automatic_selector.cpp
   src/smpi/colls/smpi_mpich_selector.c
   src/smpi/colls/smpi_intel_mpi_selector.c
   src/smpi/colls/smpi_openmpi_selector.c
@@ -243,13 +244,15 @@ set(XBT_SRC
   src/xbt/RngStream.c
   src/xbt/automaton/automaton.c
   src/xbt/automaton/automatonparse_promela.c
+  src/xbt/backtrace.cpp
   src/xbt/config.cpp
-  src/xbt/cunit.c
-  src/xbt/dict.c
+  src/xbt/cunit.cpp
+  src/xbt/dict.cpp
   src/xbt/dict_cursor.c
   src/xbt/dict_elm.c
-  src/xbt/dynar.c
-  src/xbt/ex.c
+  src/xbt/dynar.cpp
+  src/xbt/ex.cpp
+  src/xbt/exception.cpp
   src/xbt/fifo.c
   src/xbt/graph.c
   src/xbt/heap.c
@@ -270,8 +273,8 @@ set(XBT_SRC
   src/xbt/xbt_os_file.c
   src/xbt/xbt_os_synchro.c
   src/xbt/xbt_os_time.c
-  src/xbt/xbt_replay.c
-  src/xbt/xbt_str.c
+  src/xbt/xbt_replay.cpp
+  src/xbt/xbt_str.cpp
   src/xbt/xbt_strbuff.c
   src/xbt/xbt_virtu.c
   src/xbt_modinter.h
@@ -378,6 +381,7 @@ set(S4U_SRC
   src/s4u/s4u_file.cpp  
   src/s4u/s4u_host.cpp  
   src/s4u/s4u_mailbox.cpp
+  src/s4u/s4u_mutex.cpp
   src/s4u/s4u_storage.cpp
 )
 
@@ -506,6 +510,7 @@ set(TRACING_SRC
   src/instr/instr_paje_types.cpp
   src/instr/instr_paje_values.cpp
   src/instr/instr_private.h
+  src/instr/instr_smpi.h
   src/instr/instr_resource_utilization.cpp
   src/instr/instr_trace.cpp
   )
@@ -640,12 +645,15 @@ set(headers_to_install
   include/simgrid/s4u/file.hpp  
   include/simgrid/s4u/host.hpp  
   include/simgrid/s4u/mailbox.hpp  
+  include/simgrid/s4u/mutex.hpp
   include/simgrid/s4u/storage.hpp  
   include/simgrid/s4u.h
   include/simgrid/plugins/energy.h
   include/smpi/mpi.h
   include/smpi/smpi.h
   include/smpi/smpi_main.h
+  include/smpi/smpi_extended_traces.h
+  include/smpi/smpi_extended_traces_fortran.h
   include/surf/surf_routing.h
   include/xbt.h
   include/xbt/RngStream.h
@@ -662,14 +670,20 @@ set(headers_to_install
   include/xbt/dynar.h
   include/xbt/dynar.hpp
   include/xbt/ex.h
+  include/xbt/exception.hpp
+  include/xbt/backtrace.h
+  include/xbt/backtrace.hpp
   include/xbt/fifo.h
   include/xbt/file.h
   include/xbt/function_types.h
+  include/xbt/functional.hpp
+  include/xbt/future.hpp
   include/xbt/graph.h
   include/xbt/heap.h
   include/xbt/lib.h
   include/xbt/Extendable.hpp
   include/xbt/log.h
+  include/xbt/log.hpp
   include/xbt/mallocator.h
   include/xbt/matrix.h
   include/xbt/memory.hpp
@@ -696,17 +710,11 @@ set(source_of_generated_headers
 ### depend of some variables setted upper
 # -->HAVE_THREAD_CONTEXTS HAVE_UCONTEXT_CONTEXTS
 if(${HAVE_THREAD_CONTEXTS}) #pthread
-  set(SURF_SRC
-    ${SURF_SRC}
-    src/simix/ContextThread.cpp
-    src/simix/ContextThread.hpp
-    )
+  set(SURF_SRC   ${SURF_SRC}   src/simix/ContextThread.cpp
+                               src/simix/ContextThread.hpp )
 else() # NOT pthread
-  set(EXTRA_DIST
-    ${EXTRA_DIST}
-    src/simix/ContextThread.cpp
-    src/simix/ContextThread.hpp
-    )
+  set(EXTRA_DIST ${EXTRA_DIST} src/simix/ContextThread.cpp
+                               src/simix/ContextThread.hpp )
 endif()
 
 if(${HAVE_THREAD_CONTEXTS}) #pthread
@@ -788,15 +796,16 @@ set(DOC_SOURCES
   doc/triva-time_interval.svg
 
   doc/doxygen/FAQ.doc
-  doc/doxygen/advanced.doc
-  doc/doxygen/bindings.doc
-  doc/doxygen/contributing.doc
+  doc/doxygen/application.doc
+  doc/doxygen/community.doc
+  doc/doxygen/community_contact.doc
+  doc/doxygen/community_extend.doc
+  doc/doxygen/community_giveback.doc
   doc/doxygen/deployment.doc
+  doc/doxygen/examples.doc
   doc/doxygen/footer.html
   doc/doxygen/getting_started.doc
-  doc/doxygen/getting_started_index.doc
   doc/doxygen/header.html
-  doc/doxygen/help.doc
   doc/doxygen/index.doc
   doc/doxygen/inside.doc
   doc/doxygen/inside_tests.doc
@@ -805,21 +814,30 @@ set(DOC_SOURCES
   doc/doxygen/inside_extending.doc
   doc/doxygen/inside_release.doc
   doc/doxygen/install.doc
+  doc/doxygen/install_yours.doc
+  doc/doxygen/java.doc
   doc/doxygen/tutorial.doc
+  doc/doxygen/models.doc
   doc/doxygen/module-msg.doc
+  doc/doxygen/module-s4u.doc
   doc/doxygen/module-sd.doc
   doc/doxygen/module-simix.doc
   doc/doxygen/module-smpi.doc
   doc/doxygen/module-surf.doc
   doc/doxygen/module-trace.doc
   doc/doxygen/module-xbt.doc
-  doc/doxygen/modules.doc
+  doc/doxygen/module-index.doc
+  doc/doxygen/ns3.doc
   doc/doxygen/options.doc
+  doc/doxygen/outcomes.doc  
+  doc/doxygen/outcomes_logs.doc  
+  doc/doxygen/outcomes_MC.doc  
+  doc/doxygen/outcomes_vizu.doc  
   doc/doxygen/platform.doc
-  doc/doxygen/pls.doc
+  doc/doxygen/platform_lua.doc
+  doc/doxygen/scenario.doc
   doc/doxygen/stylesheet.css
-  doc/doxygen/tracing.doc
-  doc/doxygen/examples.doc
+  doc/doxygen/uhood.doc
 
   doc/manpage/smpicc.1
   doc/manpage/smpicxx.1
@@ -848,7 +866,6 @@ set(DOC_FIGS
 
 set(DOC_TOOLS
   tools/doxygen/fig2dev_postprocessor.pl
-  tools/doxygen/index_create.pl
   tools/doxygen/xbt_log_extract_hierarchy.pl
   tools/doxygen/list_routing_models_examples.sh
   )
@@ -979,6 +996,7 @@ set(CMAKE_SOURCE_FILES
   tools/cmake/Modules/FindLibunwind.cmake
   tools/cmake/Modules/FindLuaSimgrid.cmake
   tools/cmake/Modules/FindNS3.cmake
+  tools/cmake/Modules/FindPAPI.cmake
   tools/cmake/Modules/FindRngStream.cmake
   tools/cmake/Modules/FindSimGrid.cmake
   tools/cmake/Modules/FindValgrind.cmake
@@ -1007,6 +1025,7 @@ set(CMAKE_SOURCE_FILES
   tools/cmake/test_prog/prog_thread_storage.c
   tools/cmake/test_prog/prog_vsnprintf.c
   tools/cmake/cross-mingw.cmake
+  tools/smpi/generate_smpi_defines.pl
   tools/stack-cleaner/as
   tools/stack-cleaner/cc
   tools/stack-cleaner/c++
@@ -1017,7 +1036,6 @@ set(CMAKE_SOURCE_FILES
   )
 
 set(PLATFORMS_EXAMPLES
-  examples/platforms/2clusters.xml
   examples/platforms/bypassASroute.xml
   examples/platforms/bypassRoute.xml
   examples/platforms/cloud.xml
@@ -1025,7 +1043,6 @@ set(PLATFORMS_EXAMPLES
   examples/platforms/cluster_and_one_host.xml
   examples/platforms/cluster_prototype.lua
   examples/platforms/cluster_no_backbone.xml
-  examples/platforms/clusters_routing_full.xml
   examples/platforms/crosstraffic.xml
   examples/platforms/optorsim/gridpp_grid_2004.conf
   examples/platforms/optorsim/lcg_sept2004_grid.conf
@@ -1078,8 +1095,8 @@ set(PLATFORMS_EXAMPLES
   examples/platforms/syscoord/median_p2psim.syscoord
   examples/platforms/three_multicore_hosts.xml
   examples/platforms/torus_cluster.xml
+  examples/platforms/two_clusters.xml
   examples/platforms/two_hosts.xml
-  examples/platforms/two_hosts_platform.xml
   examples/platforms/two_hosts_platform_shared.xml
   examples/platforms/two_hosts_platform_with_availability.xml
   examples/platforms/two_hosts_platform_with_availability_included.xml