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updates to smpi_bench and added smpi_calibration
[simgrid.git] / src / smpi / smpi_bench.c
index 9bd1f19..3633815 100644 (file)
+/* Copyright (c) 2007, 2009, 2010. The SimGrid Team.
+ * All rights reserved.                                                     */
+
+/* This program is free software; you can redistribute it and/or modify it
+  * under the terms of the license (GNU LGPL) which comes with this package. */
+
 #include "private.h"
+#include "xbt/dict.h"
+#include "xbt/sysdep.h"
+#include "xbt/ex.h"
+#include "surf/surf.h"
+
+#include <sys/mman.h>
+#include <sys/stat.h>
+#include <sys/types.h>
+#include <errno.h>
+#include <fcntl.h>
+#include <unistd.h>
+#include <string.h>
+#include <stdio.h>
+
+XBT_LOG_NEW_DEFAULT_SUBCATEGORY(smpi_bench, smpi,
+                                "Logging specific to SMPI (benchmarking)");
+
+/* Shared allocations are handled through shared memory segments.
+ * Associated data and metadata are used as follows:
+ *
+ *                                                                    mmap #1
+ *    `allocs' dict                                                     ---- -.
+ *    ----------      shared_data_t               shared_metadata_t   / |  |  |
+ * .->| <name> | ---> -------------------- <--.   -----------------   | |  |  |
+ * |  ----------      | fd of <name>     |    |   | size of mmap  | --| |  |  |
+ * |                  | count (2)        |    |-- | data          |   \ |  |  |
+ * `----------------- | <name>           |    |   -----------------     ----  |
+ *                    --------------------    |   ^                           |
+ *                                            |   |                           |
+ *                                            |   |   `allocs_metadata' dict  |
+ *                                            |   |   ----------------------  |
+ *                                            |   `-- | <addr of mmap #1>  |<-'
+ *                                            |   .-- | <addr of mmap #2>  |<-.
+ *                                            |   |   ----------------------  |
+ *                                            |   |                           |
+ *                                            |   |                           |
+ *                                            |   |                           |
+ *                                            |   |                   mmap #2 |
+ *                                            |   v                     ---- -'
+ *                                            |   shared_metadata_t   / |  |
+ *                                            |   -----------------   | |  |
+ *                                            |   | size of mmap  | --| |  |
+ *                                            `-- | data          |   | |  |
+ *                                                -----------------   | |  |
+ *                                                                    \ |  |
+ *                                                                      ----
+ */
+
+#define PTR_STRLEN (2 + 2 * sizeof(void*) + 1)
+
+xbt_dict_t allocs = NULL;          /* Allocated on first use */
+xbt_dict_t allocs_metadata = NULL; /* Allocated on first use */
+xbt_dict_t samples = NULL;         /* Allocated on first use */
+xbt_dict_t calls = NULL;           /* Allocated on first use */
+__thread int smpi_current_rank = 0;      /* Updated after each MPI call */
+
+typedef struct {
+  int fd;
+  int count;
+  char* loc;
+} shared_data_t;
+
+typedef struct  {
+  size_t size;
+  shared_data_t* data;
+} shared_metadata_t;
+
+static size_t shm_size(int fd) {
+  struct stat st;
+
+  if(fstat(fd, &st) < 0) {
+    xbt_die("Could not stat fd %d: %s", fd, strerror(errno));
+  }
+  return (size_t)st.st_size;
+}
+
+static void* shm_map(int fd, size_t size, shared_data_t* data) {
+  void* mem;
+  char loc[PTR_STRLEN];
+  shared_metadata_t* meta;
+
+  if(size > shm_size(fd)) {
+    if(ftruncate(fd, (off_t)size) < 0) {
+      xbt_die("Could not truncate fd %d to %zu: %s", fd, size, strerror(errno));
+    }
+  }
+  mem = mmap(NULL, size, PROT_READ | PROT_WRITE, MAP_SHARED, fd, 0);
+  if(mem == MAP_FAILED) {
+    xbt_die("Could not map fd %d: %s", fd, strerror(errno));
+  }
+  if(!allocs_metadata) {
+    allocs_metadata = xbt_dict_new();
+  }
+  snprintf(loc, PTR_STRLEN, "%p", mem);
+  meta = xbt_new(shared_metadata_t, 1);
+  meta->size = size;
+  meta->data = data;
+  xbt_dict_set(allocs_metadata, loc, meta, &free);
+  XBT_DEBUG("MMAP %zu to %p", size, mem);
+  return mem;
+}
 
-// FIXME: could cause trouble with multithreaded procs on same host...
-// FIXME: add benchmarking flag?
+typedef struct {
+  int count;
+  double sum;
+  double sum_pow2;
+  double mean;
+  double relstderr;
+  int iters;
+  double threshold;
+  int started;
+} local_data_t;
 
-void smpi_bench_begin()
+void smpi_bench_destroy(void)
 {
-       int index = smpi_host_index();
+  if (allocs) {
+    xbt_dict_free(&allocs);
+  }
+  if (samples) {
+    xbt_dict_free(&samples);
+  }
+  if(calls) {
+    xbt_dict_free(&calls);
+  }
+}
 
-       SIMIX_mutex_lock(smpi_global->timers_mutexes[index]);
+static void smpi_execute_flops(double flops)
+{
+  smx_action_t action;
+  smx_host_t host;
+  host = SIMIX_host_self();
 
-       xbt_os_timer_start(smpi_global->timers[index]);
+  XBT_DEBUG("Handle real computation time: %f flops", flops);
+  action = SIMIX_req_host_execute("computation", host, flops, 1);
+#ifdef HAVE_TRACING
+  SIMIX_req_set_category (action, TRACE_internal_smpi_get_category());
+#endif
+  SIMIX_req_host_execution_wait(action);
+}
 
-       return;
+static void smpi_execute(double duration)
+{
+  if (duration >= xbt_cfg_get_double(_surf_cfg_set, "smpi/cpu_threshold")) {
+    XBT_DEBUG("Sleep for %f to handle real computation time", duration);
+    smpi_execute_flops(duration *
+                       xbt_cfg_get_double(_surf_cfg_set,
+                                          "smpi/running_power"));
+  }
+}
+
+void smpi_bench_begin(void)
+{
+  xbt_os_timer_start(smpi_process_timer());
+  smpi_current_rank = smpi_process_index();
 }
 
-void smpi_bench_end()
+void smpi_bench_end(void)
 {
-       int index = smpi_host_index();
-       double duration;
-       smx_host_t host;
-       char computation[] = "computation";
-       smx_action_t action;
-       smx_mutex_t mutex;
-       smx_cond_t cond;
+  xbt_os_timer_t timer = smpi_process_timer();
 
-       xbt_os_timer_stop(smpi_global->timers[index]);
+  xbt_os_timer_stop(timer);
+  smpi_execute(xbt_os_timer_elapsed(timer));
+}
 
-       duration = xbt_os_timer_elapsed(smpi_global->timers[index]);
+unsigned int smpi_sleep(unsigned int secs)
+{
+  smpi_bench_end();
+  smpi_execute((double) secs);
+  smpi_bench_begin();
+  return secs;
+}
 
-       SIMIX_mutex_unlock(smpi_global->timers_mutexes[index]);
+int smpi_gettimeofday(struct timeval *tv, struct timezone *tz)
+{
+  double now;
+  smpi_bench_end();
+  now = SIMIX_get_clock();
+  if (tv) {
+    tv->tv_sec = (time_t)now;
+    tv->tv_usec = (suseconds_t)((now - tv->tv_sec) * 1e6);
+  }
+  smpi_bench_begin();
+  return 0;
+}
 
-       host   = smpi_global->hosts[index];
-       action = SIMIX_action_execute(host, computation, duration * SMPI_DEFAULT_SPEED);
-       mutex  = SIMIX_mutex_init();
-       cond   = SIMIX_cond_init();
+static char *sample_location(int global, const char *file, int line)
+{
+  if (global) {
+    return bprintf("%s:%d", file, line);
+  } else {
+    return bprintf("%s:%d:%d", file, line, smpi_process_index());
+  }
+}
 
-       SIMIX_mutex_lock(mutex);
-       SIMIX_register_action_to_condition(action, cond);
-       SIMIX_cond_wait(cond, mutex);
-       SIMIX_unregister_action_to_condition(action, cond);
-       SIMIX_mutex_unlock(mutex);
+int smpi_sample_1(int global, const char *file, int line, int iters, double threshold)
+{
+  char *loc = sample_location(global, file, line);
+  local_data_t *data;
+
+  smpi_bench_end();     /* Take time from previous MPI call into account */
+  if (!samples) {
+    samples = xbt_dict_new();
+  }
+  data = xbt_dict_get_or_null(samples, loc);
+  if (!data) {
+    data = (local_data_t *) xbt_new(local_data_t, 1);
+    data->count = 0;
+    data->sum = 0.0;
+    data->sum_pow2 = 0.0;
+    data->iters = iters;
+    data->threshold = threshold;
+    data->started = 0;
+    xbt_dict_set(samples, loc, data, &free);
+    return 0;
+  }
+  free(loc);
+  return 1;
+}
+
+int smpi_sample_2(int global, const char *file, int line)
+{
+  char *loc = sample_location(global, file, line);
+  local_data_t *data;
+
+  xbt_assert(samples, "You did something very inconsistent, didn't you?");
+  data = xbt_dict_get_or_null(samples, loc);
+  if (!data) {
+    xbt_assert(data, "Please, do thing in order");
+  }
+  if (!data->started) {
+    if ((data->iters > 0 && data->count >= data->iters)
+        || (data->count > 1 && data->threshold > 0.0 && data->relstderr <= data->threshold)) {
+      XBT_DEBUG("Perform some wait of %f", data->mean);
+      smpi_execute(data->mean);
+    } else {
+      data->started = 1;
+      data->count++;
+    }
+  } else {
+    data->started = 0;
+  }
+  free(loc);
+  smpi_bench_begin();
+  smpi_process_simulated_start();
+  return data->started;
+}
+
+void smpi_sample_3(int global, const char *file, int line)
+{
+  char *loc = sample_location(global, file, line);
+  local_data_t *data;
+  double sample, n;
+
+  xbt_assert(samples, "You did something very inconsistent, didn't you?");
+  data = xbt_dict_get_or_null(samples, loc);
+  smpi_bench_end();
+  if(data && data->started && data->count < data->iters) {
+    sample = smpi_process_simulated_elapsed();
+    data->sum += sample;
+    data->sum_pow2 += sample * sample;
+    n = (double)data->count;
+    data->mean = data->sum / n;
+    data->relstderr = sqrt((data->sum_pow2 / n - data->mean * data->mean) / n) / data->mean;
+    XBT_DEBUG("Average mean after %d steps is %f, relative standard error is %f (sample was %f)", data->count,
+           data->mean, data->relstderr, sample);
+  }
+  free(loc);
+}
+
+void smpi_sample_flops(double flops)
+{
+  smpi_execute_flops(flops);
+}
+
+void *smpi_shared_malloc(size_t size, const char *file, int line)
+{
+  char *loc = bprintf("%zu_%s_%d", (size_t)getpid(), file, line);
+  size_t len = strlen(loc);
+  size_t i;
+  int fd;
+  void* mem;
+  shared_data_t *data;
+
+  for(i = 0; i < len; i++) {
+    /* Make the 'loc' ID be a flat filename */
+    if(loc[i] == '/') {
+      loc[i] = '_';
+    }
+  }
+  if (!allocs) {
+    allocs = xbt_dict_new();
+  }
+  data = xbt_dict_get_or_null(allocs, loc);
+  if(!data) {
+    fd = shm_open(loc, O_RDWR | O_CREAT | O_EXCL, S_IRUSR | S_IWUSR | S_IRGRP | S_IROTH);
+    if(fd < 0) {
+      switch(errno) {
+        case EEXIST:
+          xbt_die("Please cleanup /dev/shm/%s", loc);
+        default:
+          xbt_die("An unhandled error occured while opening %s: %s", loc, strerror(errno));
+      }
+    }
+    data = xbt_new(shared_data_t, 1);
+    data->fd = fd;
+    data->count = 1;
+    data->loc = loc;
+    mem = shm_map(fd, size, data);
+    if(shm_unlink(loc) < 0) {
+      XBT_WARN("Could not early unlink %s: %s", loc, strerror(errno));
+    }
+    xbt_dict_set(allocs, loc, data, &free);
+    XBT_DEBUG("Mapping %s at %p through %d", loc, mem, fd);
+  } else {
+    mem = shm_map(data->fd, size, data);
+    data->count++;
+  }
+  XBT_DEBUG("Malloc %zu in %p (metadata at %p)", size, mem, data);
+  return mem;
+}
+
+void smpi_shared_free(void *ptr)
+{
+  char loc[PTR_STRLEN];
+  shared_metadata_t* meta;
+  shared_data_t* data;
+
+  if (!allocs) {
+    XBT_WARN("Cannot free: nothing was allocated");
+    return;
+  }
+  if(!allocs_metadata) {
+    XBT_WARN("Cannot free: no metadata was allocated");
+  }
+  snprintf(loc, PTR_STRLEN, "%p", ptr);
+  meta = (shared_metadata_t*)xbt_dict_get_or_null(allocs_metadata, loc);
+  if (!meta) {
+    XBT_WARN("Cannot free: %p was not shared-allocated by SMPI", ptr);
+    return;
+  }
+  data = meta->data;
+  if(!data) {
+    XBT_WARN("Cannot free: something is broken in the metadata link");
+    return;
+  }
+  if(munmap(ptr, meta->size) < 0) {
+    XBT_WARN("Unmapping of fd %d failed: %s", data->fd, strerror(errno));
+  }
+  data->count--;
+  if (data->count <= 0) {
+    close(data->fd);
+    xbt_dict_remove(allocs, data->loc);
+    free(data->loc);
+  }
+}
+
+int smpi_shared_known_call(const char* func, const char* input) {
+   char* loc = bprintf("%s:%s", func, input);
+   xbt_ex_t ex;
+   int known;
+
+   if(!calls) {
+      calls = xbt_dict_new();
+   }
+   TRY {
+      xbt_dict_get(calls, loc); /* Succeed or throw */
+      known = 1;
+   }
+   CATCH(ex) {
+      if(ex.category == not_found_error) {
+         known = 0;
+         xbt_ex_free(ex);
+      } else {
+         RETHROW;
+      }
+   }
+   free(loc);
+   return known;
+}
+
+void* smpi_shared_get_call(const char* func, const char* input) {
+   char* loc = bprintf("%s:%s", func, input);
+   void* data;
+
+   if(!calls) {
+      calls = xbt_dict_new();
+   }
+   data = xbt_dict_get(calls, loc);
+   free(loc);
+   return data;
+}
 
-       SIMIX_mutex_destroy(mutex);
-       SIMIX_cond_destroy(cond);
-       //SIMIX_action_destroy(action);
+void* smpi_shared_set_call(const char* func, const char* input, void* data) {
+   char* loc = bprintf("%s:%s", func, input);
 
-       return;
+   if(!calls) {
+      calls = xbt_dict_new();
+   }
+   xbt_dict_set(calls, loc, data, NULL);
+   free(loc);
+   return data;
 }